Protein–RNA interactions for Protein: Q96AJ9

VTI1A, Vesicle transport through interaction with t-SNAREs homolog 1A, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1AQ96AJ9 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC33.05■■■□□ 2.88
VTI1AQ96AJ9 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC32.99■■■□□ 2.87
VTI1AQ96AJ9 AL031258.1-201ENST00000623562 325 ntBASIC32.97■■■□□ 2.87
VTI1AQ96AJ9 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC32.97■■■□□ 2.87
VTI1AQ96AJ9 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC32.94■■■□□ 2.86
VTI1AQ96AJ9 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC32.92■■■□□ 2.86
VTI1AQ96AJ9 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC32.89■■■□□ 2.86
VTI1AQ96AJ9 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC32.88■■■□□ 2.85
VTI1AQ96AJ9 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC32.88■■■□□ 2.85
VTI1AQ96AJ9 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC32.85■■■□□ 2.85
VTI1AQ96AJ9 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC32.85■■■□□ 2.85
VTI1AQ96AJ9 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC32.84■■■□□ 2.85
VTI1AQ96AJ9 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC32.8■■■□□ 2.84
VTI1AQ96AJ9 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC32.8■■■□□ 2.84
VTI1AQ96AJ9 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC32.79■■■□□ 2.84
VTI1AQ96AJ9 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC32.79■■■□□ 2.84
VTI1AQ96AJ9 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC32.78■■■□□ 2.84
VTI1AQ96AJ9 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC32.77■■■□□ 2.84
VTI1AQ96AJ9 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC32.75■■■□□ 2.83
VTI1AQ96AJ9 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC32.75■■■□□ 2.83
VTI1AQ96AJ9 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC32.74■■■□□ 2.83
VTI1AQ96AJ9 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC32.72■■■□□ 2.83
VTI1AQ96AJ9 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC32.71■■■□□ 2.83
VTI1AQ96AJ9 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC32.69■■■□□ 2.82
VTI1AQ96AJ9 RARRES2P7-201ENST00000567349 469 ntBASIC32.67■■■□□ 2.82
VTI1AQ96AJ9 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC32.66■■■□□ 2.82
VTI1AQ96AJ9 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC32.61■■■□□ 2.81
VTI1AQ96AJ9 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC32.59■■■□□ 2.81
VTI1AQ96AJ9 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC32.58■■■□□ 2.81
VTI1AQ96AJ9 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC32.55■■■□□ 2.8
VTI1AQ96AJ9 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC32.54■■■□□ 2.8
VTI1AQ96AJ9 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC32.49■■■□□ 2.79
VTI1AQ96AJ9 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC32.48■■■□□ 2.79
VTI1AQ96AJ9 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC32.46■■■□□ 2.79
VTI1AQ96AJ9 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC32.44■■■□□ 2.78
VTI1AQ96AJ9 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC32.42■■■□□ 2.78
VTI1AQ96AJ9 AC097358.2-201ENST00000607541 1159 ntBASIC32.4■■■□□ 2.78
VTI1AQ96AJ9 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC32.4■■■□□ 2.78
VTI1AQ96AJ9 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC32.39■■■□□ 2.78
VTI1AQ96AJ9 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC32.39■■■□□ 2.78
VTI1AQ96AJ9 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC32.36■■■□□ 2.77
VTI1AQ96AJ9 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC32.35■■■□□ 2.77
VTI1AQ96AJ9 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC32.34■■■□□ 2.77
VTI1AQ96AJ9 EBPL-203ENST00000378270 579 ntTSL 2 BASIC32.33■■■□□ 2.77
VTI1AQ96AJ9 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC32.3■■■□□ 2.76
VTI1AQ96AJ9 SETD8P1-201ENST00000623146 1180 ntBASIC32.3■■■□□ 2.76
VTI1AQ96AJ9 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC32.29■■■□□ 2.76
VTI1AQ96AJ9 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC32.29■■■□□ 2.76
VTI1AQ96AJ9 ILK-212ENST00000532063 1617 ntTSL 2 BASIC32.29■■■□□ 2.76
VTI1AQ96AJ9 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC32.28■■■□□ 2.76
VTI1AQ96AJ9 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC32.28■■■□□ 2.76
VTI1AQ96AJ9 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC32.26■■■□□ 2.75
VTI1AQ96AJ9 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC32.25■■■□□ 2.75
VTI1AQ96AJ9 KLF16-203ENST00000592313 508 ntTSL 3 BASIC32.23■■■□□ 2.75
VTI1AQ96AJ9 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC32.23■■■□□ 2.75
VTI1AQ96AJ9 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC32.22■■■□□ 2.75
VTI1AQ96AJ9 AC136428.2-201ENST00000563187 214 ntBASIC32.18■■■□□ 2.74
VTI1AQ96AJ9 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC32.15■■■□□ 2.74
VTI1AQ96AJ9 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC32.14■■■□□ 2.74
VTI1AQ96AJ9 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC32.11■■■□□ 2.73
VTI1AQ96AJ9 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC32.08■■■□□ 2.73
VTI1AQ96AJ9 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC32.07■■■□□ 2.72
VTI1AQ96AJ9 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC32.06■■■□□ 2.72
VTI1AQ96AJ9 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC32.06■■■□□ 2.72
VTI1AQ96AJ9 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC32.05■■■□□ 2.72
VTI1AQ96AJ9 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC32.04■■■□□ 2.72
VTI1AQ96AJ9 RPS2P35-201ENST00000443417 897 ntBASIC32.04■■■□□ 2.72
VTI1AQ96AJ9 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC32.04■■■□□ 2.72
VTI1AQ96AJ9 SUZ12P1-203ENST00000578195 985 ntBASIC32.04■■■□□ 2.72
VTI1AQ96AJ9 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC32.03■■■□□ 2.72
VTI1AQ96AJ9 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC32.01■■■□□ 2.71
VTI1AQ96AJ9 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC32.01■■■□□ 2.71
VTI1AQ96AJ9 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC32■■■□□ 2.71
VTI1AQ96AJ9 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC32■■■□□ 2.71
VTI1AQ96AJ9 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC32■■■□□ 2.71
VTI1AQ96AJ9 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC31.98■■■□□ 2.71
VTI1AQ96AJ9 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
VTI1AQ96AJ9 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC31.97■■■□□ 2.71
VTI1AQ96AJ9 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC31.97■■■□□ 2.71
VTI1AQ96AJ9 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
VTI1AQ96AJ9 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
VTI1AQ96AJ9 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC31.93■■■□□ 2.7
VTI1AQ96AJ9 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
VTI1AQ96AJ9 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC31.9■■■□□ 2.7
VTI1AQ96AJ9 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC31.89■■■□□ 2.7
VTI1AQ96AJ9 MVK-208ENST00000539696 608 ntTSL 5 BASIC31.83■■■□□ 2.69
VTI1AQ96AJ9 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC31.83■■■□□ 2.69
VTI1AQ96AJ9 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC31.83■■■□□ 2.69
VTI1AQ96AJ9 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
VTI1AQ96AJ9 AC145285.7-201ENST00000614819 1539 ntBASIC31.76■■■□□ 2.68
VTI1AQ96AJ9 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
VTI1AQ96AJ9 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC31.76■■■□□ 2.67
VTI1AQ96AJ9 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC31.74■■■□□ 2.67
VTI1AQ96AJ9 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC31.74■■■□□ 2.67
VTI1AQ96AJ9 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC31.72■■■□□ 2.67
VTI1AQ96AJ9 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC31.7■■■□□ 2.67
VTI1AQ96AJ9 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
VTI1AQ96AJ9 CAHM-201ENST00000604200 896 ntBASIC31.67■■■□□ 2.66
VTI1AQ96AJ9 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
VTI1AQ96AJ9 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC31.63■■■□□ 2.65
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms