Protein–RNA interactions for Protein: Q8TD43

TRPM4, Transient receptor potential cation channel subfamily M member 4, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM4Q8TD43 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC35.7■■■■□ 3.31
TRPM4Q8TD43 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC35.67■■■■□ 3.3
TRPM4Q8TD43 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC35.64■■■■□ 3.3
TRPM4Q8TD43 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC35.61■■■■□ 3.29
TRPM4Q8TD43 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC35.6■■■■□ 3.29
TRPM4Q8TD43 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC35.6■■■■□ 3.29
TRPM4Q8TD43 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC35.59■■■■□ 3.29
TRPM4Q8TD43 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC35.59■■■■□ 3.29
TRPM4Q8TD43 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC35.58■■■■□ 3.29
TRPM4Q8TD43 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC35.57■■■■□ 3.28
TRPM4Q8TD43 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC35.55■■■■□ 3.28
TRPM4Q8TD43 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC35.53■■■■□ 3.28
TRPM4Q8TD43 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC35.52■■■■□ 3.28
TRPM4Q8TD43 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC35.5■■■■□ 3.27
TRPM4Q8TD43 RARRES2P7-201ENST00000567349 469 ntBASIC35.48■■■■□ 3.27
TRPM4Q8TD43 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC35.45■■■■□ 3.27
TRPM4Q8TD43 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC35.44■■■■□ 3.26
TRPM4Q8TD43 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC35.42■■■■□ 3.26
TRPM4Q8TD43 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC35.36■■■■□ 3.25
TRPM4Q8TD43 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC35.31■■■■□ 3.24
TRPM4Q8TD43 AC097358.2-201ENST00000607541 1159 ntBASIC35.27■■■■□ 3.24
TRPM4Q8TD43 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC35.26■■■■□ 3.24
TRPM4Q8TD43 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC35.24■■■■□ 3.23
TRPM4Q8TD43 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC35.23■■■■□ 3.23
TRPM4Q8TD43 AC136428.2-201ENST00000563187 214 ntBASIC35.22■■■■□ 3.23
TRPM4Q8TD43 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC35.18■■■■□ 3.22
TRPM4Q8TD43 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC35.13■■■■□ 3.21
TRPM4Q8TD43 SUZ12P1-203ENST00000578195 985 ntBASIC35.12■■■■□ 3.21
TRPM4Q8TD43 SETD8P1-201ENST00000623146 1180 ntBASIC35.12■■■■□ 3.21
TRPM4Q8TD43 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC35.11■■■■□ 3.21
TRPM4Q8TD43 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC35.11■■■■□ 3.21
TRPM4Q8TD43 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC35.11■■■■□ 3.21
TRPM4Q8TD43 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC35.1■■■■□ 3.21
TRPM4Q8TD43 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC35.09■■■■□ 3.21
TRPM4Q8TD43 RPS2P35-201ENST00000443417 897 ntBASIC35.08■■■■□ 3.21
TRPM4Q8TD43 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC35.06■■■■□ 3.2
TRPM4Q8TD43 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC35.04■■■■□ 3.2
TRPM4Q8TD43 EBPL-203ENST00000378270 579 ntTSL 2 BASIC35.03■■■■□ 3.2
TRPM4Q8TD43 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC35■■■■□ 3.19
TRPM4Q8TD43 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC34.99■■■■□ 3.19
TRPM4Q8TD43 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC34.98■■■■□ 3.19
TRPM4Q8TD43 KLF16-203ENST00000592313 508 ntTSL 3 BASIC34.96■■■■□ 3.19
TRPM4Q8TD43 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC34.96■■■■□ 3.19
TRPM4Q8TD43 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC34.94■■■■□ 3.18
TRPM4Q8TD43 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC34.93■■■■□ 3.18
TRPM4Q8TD43 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC34.91■■■■□ 3.18
TRPM4Q8TD43 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC34.9■■■■□ 3.18
TRPM4Q8TD43 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC34.89■■■■□ 3.18
TRPM4Q8TD43 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC34.86■■■■□ 3.17
TRPM4Q8TD43 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC34.85■■■■□ 3.17
TRPM4Q8TD43 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC34.85■■■■□ 3.17
TRPM4Q8TD43 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC34.84■■■■□ 3.17
TRPM4Q8TD43 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC34.83■■■■□ 3.17
TRPM4Q8TD43 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC34.81■■■■□ 3.16
TRPM4Q8TD43 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC34.8■■■■□ 3.16
TRPM4Q8TD43 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC34.77■■■■□ 3.16
TRPM4Q8TD43 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC34.76■■■■□ 3.16
TRPM4Q8TD43 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC34.72■■■■□ 3.15
TRPM4Q8TD43 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC34.7■■■■□ 3.15
TRPM4Q8TD43 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC34.68■■■■□ 3.14
TRPM4Q8TD43 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC34.63■■■■□ 3.13
TRPM4Q8TD43 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC34.59■■■■□ 3.13
TRPM4Q8TD43 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC34.58■■■■□ 3.13
TRPM4Q8TD43 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC34.57■■■■□ 3.12
TRPM4Q8TD43 CAHM-201ENST00000604200 896 ntBASIC34.56■■■■□ 3.12
TRPM4Q8TD43 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC34.55■■■■□ 3.12
TRPM4Q8TD43 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC34.54■■■■□ 3.12
TRPM4Q8TD43 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC34.53■■■■□ 3.12
TRPM4Q8TD43 AL162393.1-201ENST00000437852 946 ntBASIC34.51■■■■□ 3.12
TRPM4Q8TD43 NRG1-221ENST00000614767 762 ntTSL 5 BASIC34.47■■■■□ 3.11
TRPM4Q8TD43 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC34.47■■■■□ 3.11
TRPM4Q8TD43 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC34.45■■■■□ 3.1
TRPM4Q8TD43 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC34.43■■■■□ 3.1
TRPM4Q8TD43 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC34.43■■■■□ 3.1
TRPM4Q8TD43 ILK-212ENST00000532063 1617 ntTSL 2 BASIC34.42■■■■□ 3.1
TRPM4Q8TD43 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC34.42■■■■□ 3.1
TRPM4Q8TD43 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC34.41■■■■□ 3.1
TRPM4Q8TD43 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC34.4■■■■□ 3.1
TRPM4Q8TD43 AC145285.7-201ENST00000614819 1539 ntBASIC34.38■■■■□ 3.09
TRPM4Q8TD43 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC34.37■■■■□ 3.09
TRPM4Q8TD43 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC34.37■■■■□ 3.09
TRPM4Q8TD43 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC34.36■■■■□ 3.09
TRPM4Q8TD43 AL391121.1-201ENST00000607967 1349 ntBASIC34.3■■■■□ 3.08
TRPM4Q8TD43 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC34.3■■■■□ 3.08
TRPM4Q8TD43 AP006261.1-201ENST00000584783 668 ntBASIC34.3■■■■□ 3.08
TRPM4Q8TD43 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC34.3■■■■□ 3.08
TRPM4Q8TD43 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC34.29■■■■□ 3.08
TRPM4Q8TD43 MVK-208ENST00000539696 608 ntTSL 5 BASIC34.27■■■■□ 3.08
TRPM4Q8TD43 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC34.26■■■■□ 3.08
TRPM4Q8TD43 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC34.26■■■■□ 3.08
TRPM4Q8TD43 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC34.26■■■■□ 3.08
TRPM4Q8TD43 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC34.26■■■■□ 3.08
TRPM4Q8TD43 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC34.25■■■■□ 3.07
TRPM4Q8TD43 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC34.24■■■■□ 3.07
TRPM4Q8TD43 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC34.24■■■■□ 3.07
TRPM4Q8TD43 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC34.24■■■■□ 3.07
TRPM4Q8TD43 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC34.23■■■■□ 3.07
TRPM4Q8TD43 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC34.21■■■■□ 3.07
TRPM4Q8TD43 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC34.17■■■■□ 3.06
TRPM4Q8TD43 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC34.17■■■■□ 3.06
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms