Protein–RNA interactions for Protein: Q8NDX5

PHC3, Polyhomeotic-like protein 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3Q8NDX5 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC28.52■■■□□ 2.16
PHC3Q8NDX5 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC28.51■■■□□ 2.15
PHC3Q8NDX5 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
PHC3Q8NDX5 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
PHC3Q8NDX5 ST7-205ENST00000393446 2114 ntTSL 5 BASIC28.48■■■□□ 2.15
PHC3Q8NDX5 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC28.47■■■□□ 2.15
PHC3Q8NDX5 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC28.46■■■□□ 2.15
PHC3Q8NDX5 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
PHC3Q8NDX5 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC28.44■■■□□ 2.14
PHC3Q8NDX5 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC28.4■■■□□ 2.14
PHC3Q8NDX5 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC28.4■■■□□ 2.14
PHC3Q8NDX5 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC28.39■■■□□ 2.14
PHC3Q8NDX5 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.13
PHC3Q8NDX5 ST7-202ENST00000323984 2142 ntTSL 5 BASIC28.38■■■□□ 2.13
PHC3Q8NDX5 ST7-207ENST00000393449 2127 ntTSL 5 BASIC28.38■■■□□ 2.13
PHC3Q8NDX5 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
PHC3Q8NDX5 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
PHC3Q8NDX5 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
PHC3Q8NDX5 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC28.34■■■□□ 2.13
PHC3Q8NDX5 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC28.34■■■□□ 2.13
PHC3Q8NDX5 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
PHC3Q8NDX5 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC28.31■■■□□ 2.12
PHC3Q8NDX5 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC28.25■■■□□ 2.11
PHC3Q8NDX5 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC28.25■■■□□ 2.11
PHC3Q8NDX5 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
PHC3Q8NDX5 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC28.21■■■□□ 2.11
PHC3Q8NDX5 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC28.21■■■□□ 2.11
PHC3Q8NDX5 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC28.21■■■□□ 2.11
PHC3Q8NDX5 AC145285.7-201ENST00000614819 1539 ntBASIC28.21■■■□□ 2.11
PHC3Q8NDX5 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC28.21■■■□□ 2.11
PHC3Q8NDX5 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC28.21■■■□□ 2.11
PHC3Q8NDX5 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC28.19■■■□□ 2.1
PHC3Q8NDX5 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
PHC3Q8NDX5 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
PHC3Q8NDX5 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
PHC3Q8NDX5 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC28.16■■■□□ 2.1
PHC3Q8NDX5 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
PHC3Q8NDX5 AP002365.1-201ENST00000603448 772 ntBASIC28.14■■■□□ 2.1
PHC3Q8NDX5 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
PHC3Q8NDX5 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC28.09■■■□□ 2.09
PHC3Q8NDX5 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC28.08■■■□□ 2.09
PHC3Q8NDX5 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC28.08■■■□□ 2.09
PHC3Q8NDX5 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC28.06■■■□□ 2.08
PHC3Q8NDX5 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
PHC3Q8NDX5 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC28.04■■■□□ 2.08
PHC3Q8NDX5 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
PHC3Q8NDX5 DYNLL1-208ENST00000550178 581 ntBASIC28.04■■■□□ 2.08
PHC3Q8NDX5 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC28.04■■■□□ 2.08
PHC3Q8NDX5 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
PHC3Q8NDX5 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC28.01■■■□□ 2.07
PHC3Q8NDX5 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC27.99■■■□□ 2.07
PHC3Q8NDX5 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC27.97■■■□□ 2.07
PHC3Q8NDX5 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC27.97■■■□□ 2.07
PHC3Q8NDX5 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
PHC3Q8NDX5 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC27.96■■■□□ 2.07
PHC3Q8NDX5 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC27.96■■■□□ 2.07
PHC3Q8NDX5 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC27.96■■■□□ 2.07
PHC3Q8NDX5 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
PHC3Q8NDX5 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC27.94■■■□□ 2.06
PHC3Q8NDX5 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC27.94■■■□□ 2.06
PHC3Q8NDX5 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC27.94■■■□□ 2.06
PHC3Q8NDX5 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC27.91■■■□□ 2.06
PHC3Q8NDX5 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC27.91■■■□□ 2.06
PHC3Q8NDX5 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC27.91■■■□□ 2.06
PHC3Q8NDX5 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC27.9■■■□□ 2.06
PHC3Q8NDX5 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC27.89■■■□□ 2.06
PHC3Q8NDX5 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC27.89■■■□□ 2.06
PHC3Q8NDX5 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC27.87■■■□□ 2.05
PHC3Q8NDX5 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC27.86■■■□□ 2.05
PHC3Q8NDX5 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC27.86■■■□□ 2.05
PHC3Q8NDX5 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
PHC3Q8NDX5 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC27.84■■■□□ 2.05
PHC3Q8NDX5 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC27.84■■■□□ 2.05
PHC3Q8NDX5 AL031258.1-201ENST00000623562 325 ntBASIC27.83■■■□□ 2.05
PHC3Q8NDX5 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC27.82■■■□□ 2.04
PHC3Q8NDX5 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC27.82■■■□□ 2.04
PHC3Q8NDX5 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC27.81■■■□□ 2.04
PHC3Q8NDX5 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
PHC3Q8NDX5 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
PHC3Q8NDX5 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC27.79■■■□□ 2.04
PHC3Q8NDX5 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC27.76■■■□□ 2.04
PHC3Q8NDX5 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC27.76■■■□□ 2.03
PHC3Q8NDX5 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
PHC3Q8NDX5 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
PHC3Q8NDX5 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC27.71■■■□□ 2.03
PHC3Q8NDX5 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC27.66■■■□□ 2.02
PHC3Q8NDX5 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
PHC3Q8NDX5 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC27.65■■■□□ 2.02
PHC3Q8NDX5 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC27.64■■■□□ 2.02
PHC3Q8NDX5 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC27.64■■■□□ 2.01
PHC3Q8NDX5 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
PHC3Q8NDX5 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
PHC3Q8NDX5 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
PHC3Q8NDX5 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC27.61■■■□□ 2.01
PHC3Q8NDX5 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
PHC3Q8NDX5 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC27.57■■■□□ 2
PHC3Q8NDX5 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
PHC3Q8NDX5 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC27.53■■■□□ 2
PHC3Q8NDX5 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC27.52■■■□□ 2
PHC3Q8NDX5 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC27.52■■■□□ 2
Retrieved 100 of 98,524 protein–RNA pairs in 64.5 ms