Protein–RNA interactions for Protein: Q8NDX2

SLC17A8, Vesicular glutamate transporter 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC17A8Q8NDX2 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC32.67■■■□□ 2.82
SLC17A8Q8NDX2 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC32.65■■■□□ 2.82
SLC17A8Q8NDX2 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC32.65■■■□□ 2.82
SLC17A8Q8NDX2 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC32.61■■■□□ 2.81
SLC17A8Q8NDX2 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC32.61■■■□□ 2.81
SLC17A8Q8NDX2 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC32.57■■■□□ 2.8
SLC17A8Q8NDX2 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC32.55■■■□□ 2.8
SLC17A8Q8NDX2 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC32.54■■■□□ 2.8
SLC17A8Q8NDX2 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC32.52■■■□□ 2.8
SLC17A8Q8NDX2 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC32.5■■■□□ 2.79
SLC17A8Q8NDX2 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC32.48■■■□□ 2.79
SLC17A8Q8NDX2 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC32.46■■■□□ 2.79
SLC17A8Q8NDX2 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC32.42■■■□□ 2.78
SLC17A8Q8NDX2 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC32.42■■■□□ 2.78
SLC17A8Q8NDX2 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC32.4■■■□□ 2.78
SLC17A8Q8NDX2 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC32.4■■■□□ 2.78
SLC17A8Q8NDX2 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC32.4■■■□□ 2.78
SLC17A8Q8NDX2 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC32.39■■■□□ 2.78
SLC17A8Q8NDX2 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
SLC17A8Q8NDX2 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC32.34■■■□□ 2.77
SLC17A8Q8NDX2 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC32.33■■■□□ 2.77
SLC17A8Q8NDX2 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC32.28■■■□□ 2.76
SLC17A8Q8NDX2 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC32.28■■■□□ 2.76
SLC17A8Q8NDX2 RARRES2P7-201ENST00000567349 469 ntBASIC32.28■■■□□ 2.76
SLC17A8Q8NDX2 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC32.27■■■□□ 2.76
SLC17A8Q8NDX2 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC32.27■■■□□ 2.76
SLC17A8Q8NDX2 DYNLL1-208ENST00000550178 581 ntBASIC32.27■■■□□ 2.76
SLC17A8Q8NDX2 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC32.26■■■□□ 2.75
SLC17A8Q8NDX2 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC32.25■■■□□ 2.75
SLC17A8Q8NDX2 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC32.24■■■□□ 2.75
SLC17A8Q8NDX2 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC32.24■■■□□ 2.75
SLC17A8Q8NDX2 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC32.23■■■□□ 2.75
SLC17A8Q8NDX2 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC32.22■■■□□ 2.75
SLC17A8Q8NDX2 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC32.2■■■□□ 2.75
SLC17A8Q8NDX2 AC097358.2-201ENST00000607541 1159 ntBASIC32.19■■■□□ 2.74
SLC17A8Q8NDX2 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC32.19■■■□□ 2.74
SLC17A8Q8NDX2 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC32.18■■■□□ 2.74
SLC17A8Q8NDX2 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC32.18■■■□□ 2.74
SLC17A8Q8NDX2 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC32.17■■■□□ 2.74
SLC17A8Q8NDX2 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC32.17■■■□□ 2.74
SLC17A8Q8NDX2 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC32.15■■■□□ 2.74
SLC17A8Q8NDX2 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC32.15■■■□□ 2.74
SLC17A8Q8NDX2 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC32.14■■■□□ 2.74
SLC17A8Q8NDX2 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC32.12■■■□□ 2.73
SLC17A8Q8NDX2 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC32.11■■■□□ 2.73
SLC17A8Q8NDX2 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC32.08■■■□□ 2.73
SLC17A8Q8NDX2 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC32.06■■■□□ 2.72
SLC17A8Q8NDX2 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC32.05■■■□□ 2.72
SLC17A8Q8NDX2 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC32.03■■■□□ 2.72
SLC17A8Q8NDX2 AC145285.7-201ENST00000614819 1539 ntBASIC32.02■■■□□ 2.72
SLC17A8Q8NDX2 SUZ12P1-203ENST00000578195 985 ntBASIC32.01■■■□□ 2.71
SLC17A8Q8NDX2 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC31.99■■■□□ 2.71
SLC17A8Q8NDX2 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC31.97■■■□□ 2.71
SLC17A8Q8NDX2 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
SLC17A8Q8NDX2 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC31.97■■■□□ 2.71
SLC17A8Q8NDX2 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC31.97■■■□□ 2.71
SLC17A8Q8NDX2 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC31.96■■■□□ 2.71
SLC17A8Q8NDX2 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC31.96■■■□□ 2.71
SLC17A8Q8NDX2 AL031258.1-201ENST00000623562 325 ntBASIC31.96■■■□□ 2.71
SLC17A8Q8NDX2 MIR7108-201ENST00000614319 87 ntBASIC31.95■■■□□ 2.71
SLC17A8Q8NDX2 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC31.94■■■□□ 2.7
SLC17A8Q8NDX2 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
SLC17A8Q8NDX2 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
SLC17A8Q8NDX2 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC31.87■■■□□ 2.69
SLC17A8Q8NDX2 AC136428.2-201ENST00000563187 214 ntBASIC31.85■■■□□ 2.69
SLC17A8Q8NDX2 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC31.81■■■□□ 2.68
SLC17A8Q8NDX2 PVT1-219ENST00000523427 938 ntTSL 3 BASIC31.81■■■□□ 2.68
SLC17A8Q8NDX2 HLA-V-202ENST00000446817 847 ntBASIC31.79■■■□□ 2.68
SLC17A8Q8NDX2 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC31.77■■■□□ 2.68
SLC17A8Q8NDX2 MBP-237ENST00000579129 1052 ntTSL 5 BASIC31.76■■■□□ 2.67
SLC17A8Q8NDX2 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC31.76■■■□□ 2.67
SLC17A8Q8NDX2 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
SLC17A8Q8NDX2 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC31.74■■■□□ 2.67
SLC17A8Q8NDX2 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC31.69■■■□□ 2.66
SLC17A8Q8NDX2 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC31.69■■■□□ 2.66
SLC17A8Q8NDX2 SETD8P1-201ENST00000623146 1180 ntBASIC31.69■■■□□ 2.66
SLC17A8Q8NDX2 ABHD17AP4-201ENST00000411545 909 ntBASIC31.68■■■□□ 2.66
SLC17A8Q8NDX2 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
SLC17A8Q8NDX2 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC31.67■■■□□ 2.66
SLC17A8Q8NDX2 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC31.66■■■□□ 2.66
SLC17A8Q8NDX2 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC31.65■■■□□ 2.66
SLC17A8Q8NDX2 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC31.65■■■□□ 2.66
SLC17A8Q8NDX2 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
SLC17A8Q8NDX2 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
SLC17A8Q8NDX2 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC31.61■■■□□ 2.65
SLC17A8Q8NDX2 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC31.59■■■□□ 2.65
SLC17A8Q8NDX2 AL162393.1-201ENST00000437852 946 ntBASIC31.58■■■□□ 2.65
SLC17A8Q8NDX2 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
SLC17A8Q8NDX2 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC31.56■■■□□ 2.64
SLC17A8Q8NDX2 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC31.56■■■□□ 2.64
SLC17A8Q8NDX2 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
SLC17A8Q8NDX2 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC31.55■■■□□ 2.64
SLC17A8Q8NDX2 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC31.54■■■□□ 2.64
SLC17A8Q8NDX2 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC31.53■■■□□ 2.64
SLC17A8Q8NDX2 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC31.52■■■□□ 2.64
SLC17A8Q8NDX2 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
SLC17A8Q8NDX2 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC31.48■■■□□ 2.63
SLC17A8Q8NDX2 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
SLC17A8Q8NDX2 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
SLC17A8Q8NDX2 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC31.47■■■□□ 2.63
Retrieved 100 of 98,524 protein–RNA pairs in 16 ms