Protein–RNA interactions for Protein: Q8N813

C3orf56, Putative uncharacterized protein C3orf56, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C3orf56Q8N813 AL031258.1-201ENST00000623562 325 ntBASIC23.29■■□□□ 1.32
C3orf56Q8N813 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC23.29■■□□□ 1.32
C3orf56Q8N813 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
C3orf56Q8N813 RARRES2P7-201ENST00000567349 469 ntBASIC23.28■■□□□ 1.32
C3orf56Q8N813 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC23.24■■□□□ 1.31
C3orf56Q8N813 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
C3orf56Q8N813 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
C3orf56Q8N813 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
C3orf56Q8N813 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
C3orf56Q8N813 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC23.15■■□□□ 1.3
C3orf56Q8N813 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC23.11■■□□□ 1.29
C3orf56Q8N813 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
C3orf56Q8N813 AC097358.2-201ENST00000607541 1159 ntBASIC23.1■■□□□ 1.29
C3orf56Q8N813 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC23.07■■□□□ 1.28
C3orf56Q8N813 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC23.04■■□□□ 1.28
C3orf56Q8N813 RPS2P35-201ENST00000443417 897 ntBASIC23.03■■□□□ 1.28
C3orf56Q8N813 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC23.01■■□□□ 1.27
C3orf56Q8N813 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC22.99■■□□□ 1.27
C3orf56Q8N813 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC22.94■■□□□ 1.26
C3orf56Q8N813 SETD8P1-201ENST00000623146 1180 ntBASIC22.94■■□□□ 1.26
C3orf56Q8N813 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
C3orf56Q8N813 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
C3orf56Q8N813 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC22.92■■□□□ 1.26
C3orf56Q8N813 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC22.91■■□□□ 1.26
C3orf56Q8N813 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
C3orf56Q8N813 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC22.89■■□□□ 1.25
C3orf56Q8N813 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
C3orf56Q8N813 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
C3orf56Q8N813 AC136428.2-201ENST00000563187 214 ntBASIC22.87■■□□□ 1.25
C3orf56Q8N813 SUZ12P1-203ENST00000578195 985 ntBASIC22.84■■□□□ 1.25
C3orf56Q8N813 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC22.83■■□□□ 1.24
C3orf56Q8N813 KLF16-203ENST00000592313 508 ntTSL 3 BASIC22.82■■□□□ 1.24
C3orf56Q8N813 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC22.81■■□□□ 1.24
C3orf56Q8N813 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
C3orf56Q8N813 EBPL-203ENST00000378270 579 ntTSL 2 BASIC22.79■■□□□ 1.24
C3orf56Q8N813 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
C3orf56Q8N813 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
C3orf56Q8N813 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC22.76■■□□□ 1.23
C3orf56Q8N813 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC22.76■■□□□ 1.23
C3orf56Q8N813 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC22.73■■□□□ 1.23
C3orf56Q8N813 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC22.73■■□□□ 1.23
C3orf56Q8N813 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC22.72■■□□□ 1.23
C3orf56Q8N813 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC22.72■■□□□ 1.23
C3orf56Q8N813 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC22.71■■□□□ 1.23
C3orf56Q8N813 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC22.71■■□□□ 1.23
C3orf56Q8N813 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
C3orf56Q8N813 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
C3orf56Q8N813 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC22.68■■□□□ 1.22
C3orf56Q8N813 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC22.66■■□□□ 1.22
C3orf56Q8N813 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC22.65■■□□□ 1.22
C3orf56Q8N813 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC22.65■■□□□ 1.22
C3orf56Q8N813 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC22.64■■□□□ 1.21
C3orf56Q8N813 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC22.64■■□□□ 1.21
C3orf56Q8N813 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
C3orf56Q8N813 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC22.63■■□□□ 1.21
C3orf56Q8N813 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
C3orf56Q8N813 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
C3orf56Q8N813 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
C3orf56Q8N813 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC22.58■■□□□ 1.21
C3orf56Q8N813 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
C3orf56Q8N813 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
C3orf56Q8N813 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC22.56■■□□□ 1.2
C3orf56Q8N813 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
C3orf56Q8N813 AP006261.1-201ENST00000584783 668 ntBASIC22.53■■□□□ 1.2
C3orf56Q8N813 AL162393.1-201ENST00000437852 946 ntBASIC22.52■■□□□ 1.2
C3orf56Q8N813 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC22.51■■□□□ 1.19
C3orf56Q8N813 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
C3orf56Q8N813 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
C3orf56Q8N813 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
C3orf56Q8N813 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC22.45■■□□□ 1.18
C3orf56Q8N813 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC22.43■■□□□ 1.18
C3orf56Q8N813 MIR7108-201ENST00000614319 87 ntBASIC22.43■■□□□ 1.18
C3orf56Q8N813 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
C3orf56Q8N813 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
C3orf56Q8N813 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC22.39■■□□□ 1.18
C3orf56Q8N813 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
C3orf56Q8N813 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC22.39■■□□□ 1.17
C3orf56Q8N813 CAHM-201ENST00000604200 896 ntBASIC22.39■■□□□ 1.17
C3orf56Q8N813 NRG1-221ENST00000614767 762 ntTSL 5 BASIC22.38■■□□□ 1.17
C3orf56Q8N813 ABHD17AP4-201ENST00000411545 909 ntBASIC22.36■■□□□ 1.17
C3orf56Q8N813 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
C3orf56Q8N813 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
C3orf56Q8N813 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC22.35■■□□□ 1.17
C3orf56Q8N813 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
C3orf56Q8N813 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
C3orf56Q8N813 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC22.33■■□□□ 1.17
C3orf56Q8N813 PVT1-219ENST00000523427 938 ntTSL 3 BASIC22.33■■□□□ 1.17
C3orf56Q8N813 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC22.32■■□□□ 1.16
C3orf56Q8N813 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC22.32■■□□□ 1.16
C3orf56Q8N813 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
C3orf56Q8N813 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
C3orf56Q8N813 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
C3orf56Q8N813 HNRNPLP2-201ENST00000568980 1570 ntBASIC22.3■■□□□ 1.16
C3orf56Q8N813 AL391121.1-201ENST00000607967 1349 ntBASIC22.3■■□□□ 1.16
C3orf56Q8N813 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
C3orf56Q8N813 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
C3orf56Q8N813 MVK-208ENST00000539696 608 ntTSL 5 BASIC22.28■■□□□ 1.16
C3orf56Q8N813 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC22.27■■□□□ 1.16
C3orf56Q8N813 MLEC-202ENST00000412616 841 ntTSL 3 BASIC22.27■■□□□ 1.16
C3orf56Q8N813 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC22.27■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 12.3 ms