Protein–RNA interactions for Protein: Q8N139

ABCA6, ATP-binding cassette sub-family A member 6, humanhuman

Predictions only

Length 1,617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA6Q8N139 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC44.83■■■■■ 4.77
ABCA6Q8N139 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC44.77■■■■■ 4.76
ABCA6Q8N139 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC44.77■■■■■ 4.76
ABCA6Q8N139 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC44.75■■■■■ 4.75
ABCA6Q8N139 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC44.73■■■■■ 4.75
ABCA6Q8N139 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC44.67■■■■■ 4.74
ABCA6Q8N139 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC44.64■■■■■ 4.74
ABCA6Q8N139 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC44.63■■■■■ 4.74
ABCA6Q8N139 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC44.62■■■■■ 4.73
ABCA6Q8N139 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC44.59■■■■■ 4.73
ABCA6Q8N139 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC44.57■■■■■ 4.73
ABCA6Q8N139 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC44.55■■■■■ 4.72
ABCA6Q8N139 RARRES2P7-201ENST00000567349 469 ntBASIC44.54■■■■■ 4.72
ABCA6Q8N139 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC44.5■■■■■ 4.71
ABCA6Q8N139 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC44.5■■■■■ 4.71
ABCA6Q8N139 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC44.49■■■■■ 4.71
ABCA6Q8N139 AC136428.2-201ENST00000563187 214 ntBASIC44.39■■■■■ 4.7
ABCA6Q8N139 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC44.34■■■■■ 4.69
ABCA6Q8N139 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC44.32■■■■■ 4.69
ABCA6Q8N139 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC44.28■■■■■ 4.68
ABCA6Q8N139 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC44.27■■■■■ 4.68
ABCA6Q8N139 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC44.26■■■■■ 4.68
ABCA6Q8N139 SUZ12P1-203ENST00000578195 985 ntBASIC44.22■■■■■ 4.67
ABCA6Q8N139 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC44.22■■■■■ 4.67
ABCA6Q8N139 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC44.21■■■■■ 4.67
ABCA6Q8N139 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC44.18■■■■■ 4.66
ABCA6Q8N139 AC097358.2-201ENST00000607541 1159 ntBASIC44.14■■■■■ 4.66
ABCA6Q8N139 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC44.12■■■■■ 4.65
ABCA6Q8N139 SETD8P1-201ENST00000623146 1180 ntBASIC44.1■■■■■ 4.65
ABCA6Q8N139 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC44.08■■■■■ 4.65
ABCA6Q8N139 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC44.05■■■■■ 4.64
ABCA6Q8N139 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC44.02■■■■■ 4.64
ABCA6Q8N139 EBPL-203ENST00000378270 579 ntTSL 2 BASIC44.02■■■■■ 4.64
ABCA6Q8N139 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC44.01■■■■■ 4.64
ABCA6Q8N139 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC43.99■■■■■ 4.63
ABCA6Q8N139 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC43.98■■■■■ 4.63
ABCA6Q8N139 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC43.97■■■■■ 4.63
ABCA6Q8N139 RPS2P35-201ENST00000443417 897 ntBASIC43.95■■■■■ 4.63
ABCA6Q8N139 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC43.94■■■■■ 4.62
ABCA6Q8N139 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC43.94■■■■■ 4.62
ABCA6Q8N139 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC43.92■■■■■ 4.62
ABCA6Q8N139 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC43.91■■■■■ 4.62
ABCA6Q8N139 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC43.87■■■■■ 4.61
ABCA6Q8N139 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC43.84■■■■■ 4.61
ABCA6Q8N139 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC43.81■■■■■ 4.6
ABCA6Q8N139 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC43.8■■■■■ 4.6
ABCA6Q8N139 KLF16-203ENST00000592313 508 ntTSL 3 BASIC43.8■■■■■ 4.6
ABCA6Q8N139 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC43.75■■■■■ 4.59
ABCA6Q8N139 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC43.74■■■■■ 4.59
ABCA6Q8N139 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC43.74■■■■■ 4.59
ABCA6Q8N139 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC43.73■■■■■ 4.59
ABCA6Q8N139 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC43.73■■■■■ 4.59
ABCA6Q8N139 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC43.7■■■■■ 4.59
ABCA6Q8N139 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC43.67■■■■■ 4.58
ABCA6Q8N139 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC43.64■■■■■ 4.58
ABCA6Q8N139 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC43.63■■■■■ 4.58
ABCA6Q8N139 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC43.61■■■■■ 4.57
ABCA6Q8N139 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC43.55■■■■■ 4.56
ABCA6Q8N139 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC43.52■■■■■ 4.56
ABCA6Q8N139 AL162393.1-201ENST00000437852 946 ntBASIC43.51■■■■■ 4.56
ABCA6Q8N139 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC43.44■■■■■ 4.55
ABCA6Q8N139 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC43.36■■■■■ 4.53
ABCA6Q8N139 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC43.35■■■■■ 4.53
ABCA6Q8N139 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC43.33■■■■■ 4.53
ABCA6Q8N139 NRG1-221ENST00000614767 762 ntTSL 5 BASIC43.33■■■■■ 4.53
ABCA6Q8N139 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC43.3■■■■■ 4.52
ABCA6Q8N139 CAHM-201ENST00000604200 896 ntBASIC43.29■■■■■ 4.52
ABCA6Q8N139 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC43.27■■■■■ 4.52
ABCA6Q8N139 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC43.26■■■■■ 4.52
ABCA6Q8N139 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC43.24■■■■■ 4.51
ABCA6Q8N139 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC43.24■■■■■ 4.51
ABCA6Q8N139 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC43.18■■■■■ 4.5
ABCA6Q8N139 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC43.16■■■■■ 4.5
ABCA6Q8N139 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC43.16■■■■■ 4.5
ABCA6Q8N139 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC43.16■■■■■ 4.5
ABCA6Q8N139 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC43.15■■■■■ 4.5
ABCA6Q8N139 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC43.15■■■■■ 4.5
ABCA6Q8N139 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC43.13■■■■■ 4.49
ABCA6Q8N139 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC43.11■■■■■ 4.49
ABCA6Q8N139 AL391121.1-201ENST00000607967 1349 ntBASIC43.11■■■■■ 4.49
ABCA6Q8N139 AC145285.7-201ENST00000614819 1539 ntBASIC43.11■■■■■ 4.49
ABCA6Q8N139 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC43.07■■■■■ 4.48
ABCA6Q8N139 AP006261.1-201ENST00000584783 668 ntBASIC43.06■■■■■ 4.48
ABCA6Q8N139 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC43.05■■■■■ 4.48
ABCA6Q8N139 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC43.04■■■■■ 4.48
ABCA6Q8N139 ILK-212ENST00000532063 1617 ntTSL 2 BASIC43.04■■■■■ 4.48
ABCA6Q8N139 HNRNPLP2-201ENST00000568980 1570 ntBASIC43.03■■■■■ 4.48
ABCA6Q8N139 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC43.01■■■■■ 4.48
ABCA6Q8N139 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC43■■■■■ 4.47
ABCA6Q8N139 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC42.99■■■■■ 4.47
ABCA6Q8N139 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC42.97■■■■■ 4.47
ABCA6Q8N139 MVK-208ENST00000539696 608 ntTSL 5 BASIC42.97■■■■■ 4.47
ABCA6Q8N139 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC42.97■■■■■ 4.47
ABCA6Q8N139 AL133380.1-201ENST00000506013 324 ntBASIC42.96■■■■■ 4.47
ABCA6Q8N139 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC42.94■■■■■ 4.46
ABCA6Q8N139 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC42.94■■■■■ 4.46
ABCA6Q8N139 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC42.92■■■■■ 4.46
ABCA6Q8N139 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC42.91■■■■■ 4.46
ABCA6Q8N139 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC42.88■■■■■ 4.46
ABCA6Q8N139 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC42.87■■■■■ 4.45
Retrieved 100 of 98,524 protein–RNA pairs in 67.7 ms