Protein–RNA interactions for Protein: Q8IZH2

XRN1, 5'-3' exoribonuclease 1, humanhuman

Known RBP Predictions only

Length 1,706 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1Q8IZH2 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC41.9■■■■■ 4.3
XRN1Q8IZH2 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC41.87■■■■■ 4.29
XRN1Q8IZH2 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC41.86■■■■■ 4.29
XRN1Q8IZH2 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC41.82■■■■■ 4.29
XRN1Q8IZH2 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC41.79■■■■■ 4.28
XRN1Q8IZH2 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC41.79■■■■■ 4.28
XRN1Q8IZH2 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC41.77■■■■■ 4.28
XRN1Q8IZH2 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC41.75■■■■■ 4.27
XRN1Q8IZH2 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC41.75■■■■■ 4.27
XRN1Q8IZH2 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC41.72■■■■■ 4.27
XRN1Q8IZH2 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC41.72■■■■■ 4.27
XRN1Q8IZH2 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC41.71■■■■■ 4.27
XRN1Q8IZH2 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC41.7■■■■■ 4.27
XRN1Q8IZH2 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC41.62■■■■■ 4.25
XRN1Q8IZH2 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC41.62■■■■■ 4.25
XRN1Q8IZH2 RARRES2P7-201ENST00000567349 469 ntBASIC41.61■■■■■ 4.25
XRN1Q8IZH2 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC41.61■■■■■ 4.25
XRN1Q8IZH2 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC41.55■■■■■ 4.24
XRN1Q8IZH2 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC41.55■■■■■ 4.24
XRN1Q8IZH2 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC41.52■■■■■ 4.24
XRN1Q8IZH2 AC136428.2-201ENST00000563187 214 ntBASIC41.49■■■■■ 4.23
XRN1Q8IZH2 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC41.45■■■■■ 4.23
XRN1Q8IZH2 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC41.45■■■■■ 4.23
XRN1Q8IZH2 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC41.39■■■■■ 4.22
XRN1Q8IZH2 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC41.34■■■■■ 4.21
XRN1Q8IZH2 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC41.3■■■■■ 4.2
XRN1Q8IZH2 SUZ12P1-203ENST00000578195 985 ntBASIC41.3■■■■■ 4.2
XRN1Q8IZH2 EBPL-203ENST00000378270 579 ntTSL 2 BASIC41.29■■■■■ 4.2
XRN1Q8IZH2 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC41.28■■■■■ 4.2
XRN1Q8IZH2 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC41.27■■■■■ 4.2
XRN1Q8IZH2 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC41.27■■■■■ 4.2
XRN1Q8IZH2 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC41.27■■■■■ 4.2
XRN1Q8IZH2 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC41.24■■■■■ 4.19
XRN1Q8IZH2 AC097358.2-201ENST00000607541 1159 ntBASIC41.22■■■■■ 4.19
XRN1Q8IZH2 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC41.22■■■■■ 4.19
XRN1Q8IZH2 SETD8P1-201ENST00000623146 1180 ntBASIC41.21■■■■■ 4.19
XRN1Q8IZH2 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC41.12■■■■■ 4.17
XRN1Q8IZH2 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC41.11■■■■■ 4.17
XRN1Q8IZH2 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC41.1■■■■■ 4.17
XRN1Q8IZH2 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC41.08■■■■■ 4.17
XRN1Q8IZH2 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC41.07■■■■■ 4.16
XRN1Q8IZH2 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC41.05■■■■■ 4.16
XRN1Q8IZH2 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC41.01■■■■■ 4.16
XRN1Q8IZH2 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC41.01■■■■■ 4.16
XRN1Q8IZH2 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC41.01■■■■■ 4.16
XRN1Q8IZH2 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC41■■■■■ 4.15
XRN1Q8IZH2 KLF16-203ENST00000592313 508 ntTSL 3 BASIC40.98■■■■■ 4.15
XRN1Q8IZH2 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC40.98■■■■■ 4.15
XRN1Q8IZH2 RPS2P35-201ENST00000443417 897 ntBASIC40.94■■■■■ 4.14
XRN1Q8IZH2 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC40.93■■■■■ 4.14
XRN1Q8IZH2 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC40.89■■■■■ 4.14
XRN1Q8IZH2 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC40.87■■■■■ 4.13
XRN1Q8IZH2 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC40.87■■■■■ 4.13
XRN1Q8IZH2 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC40.87■■■■■ 4.13
XRN1Q8IZH2 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC40.87■■■■■ 4.13
XRN1Q8IZH2 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC40.85■■■■■ 4.13
XRN1Q8IZH2 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC40.84■■■■■ 4.13
XRN1Q8IZH2 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC40.78■■■■■ 4.12
XRN1Q8IZH2 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC40.67■■■■■ 4.1
XRN1Q8IZH2 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC40.66■■■■■ 4.1
XRN1Q8IZH2 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC40.65■■■■■ 4.1
XRN1Q8IZH2 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC40.63■■■■■ 4.09
XRN1Q8IZH2 AL162393.1-201ENST00000437852 946 ntBASIC40.62■■■■■ 4.09
XRN1Q8IZH2 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC40.61■■■■■ 4.09
XRN1Q8IZH2 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC40.57■■■■■ 4.09
XRN1Q8IZH2 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC40.56■■■■■ 4.08
XRN1Q8IZH2 ILK-212ENST00000532063 1617 ntTSL 2 BASIC40.54■■■■■ 4.08
XRN1Q8IZH2 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC40.52■■■■■ 4.08
XRN1Q8IZH2 CAHM-201ENST00000604200 896 ntBASIC40.47■■■■■ 4.07
XRN1Q8IZH2 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC40.46■■■■■ 4.07
XRN1Q8IZH2 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC40.46■■■■■ 4.07
XRN1Q8IZH2 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC40.46■■■■■ 4.07
XRN1Q8IZH2 NRG1-221ENST00000614767 762 ntTSL 5 BASIC40.46■■■■■ 4.07
XRN1Q8IZH2 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC40.45■■■■■ 4.07
XRN1Q8IZH2 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC40.44■■■■■ 4.06
XRN1Q8IZH2 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC40.42■■■■■ 4.06
XRN1Q8IZH2 AC145285.7-201ENST00000614819 1539 ntBASIC40.41■■■■■ 4.06
XRN1Q8IZH2 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC40.4■■■■■ 4.06
XRN1Q8IZH2 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC40.39■■■■■ 4.06
XRN1Q8IZH2 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC40.39■■■■■ 4.06
XRN1Q8IZH2 AL391121.1-201ENST00000607967 1349 ntBASIC40.34■■■■■ 4.05
XRN1Q8IZH2 MVK-208ENST00000539696 608 ntTSL 5 BASIC40.33■■■■■ 4.05
XRN1Q8IZH2 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC40.32■■■■■ 4.05
XRN1Q8IZH2 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC40.31■■■■■ 4.04
XRN1Q8IZH2 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC40.29■■■■■ 4.04
XRN1Q8IZH2 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC40.28■■■■■ 4.04
XRN1Q8IZH2 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC40.27■■■■■ 4.04
XRN1Q8IZH2 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC40.26■■■■■ 4.04
XRN1Q8IZH2 AP006261.1-201ENST00000584783 668 ntBASIC40.25■■■■■ 4.03
XRN1Q8IZH2 AL133380.1-201ENST00000506013 324 ntBASIC40.25■■■■■ 4.03
XRN1Q8IZH2 HNRNPLP2-201ENST00000568980 1570 ntBASIC40.24■■■■■ 4.03
XRN1Q8IZH2 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC40.23■■■■■ 4.03
XRN1Q8IZH2 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC40.23■■■■■ 4.03
XRN1Q8IZH2 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC40.19■■■■■ 4.02
XRN1Q8IZH2 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC40.18■■■■■ 4.02
XRN1Q8IZH2 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC40.18■■■■■ 4.02
XRN1Q8IZH2 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC40.17■■■■■ 4.02
XRN1Q8IZH2 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC40.16■■■■■ 4.02
XRN1Q8IZH2 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC40.12■■■■■ 4.01
XRN1Q8IZH2 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC40.11■■■■■ 4.01
Retrieved 100 of 98,524 protein–RNA pairs in 14.5 ms