Protein–RNA interactions for Protein: Q86VI4

LAPTM4B, Lysosomal-associated transmembrane protein 4B, humanhuman

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4BQ86VI4 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC27.34■■□□□ 1.97
LAPTM4BQ86VI4 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC27.33■■□□□ 1.97
LAPTM4BQ86VI4 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
LAPTM4BQ86VI4 DYNLL1-208ENST00000550178 581 ntBASIC27.33■■□□□ 1.97
LAPTM4BQ86VI4 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
LAPTM4BQ86VI4 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC27.33■■□□□ 1.97
LAPTM4BQ86VI4 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
LAPTM4BQ86VI4 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC27.31■■□□□ 1.96
LAPTM4BQ86VI4 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
LAPTM4BQ86VI4 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC27.26■■□□□ 1.95
LAPTM4BQ86VI4 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC27.26■■□□□ 1.95
LAPTM4BQ86VI4 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
LAPTM4BQ86VI4 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC27.24■■□□□ 1.95
LAPTM4BQ86VI4 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC27.23■■□□□ 1.95
LAPTM4BQ86VI4 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
LAPTM4BQ86VI4 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC27.19■■□□□ 1.94
LAPTM4BQ86VI4 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC27.18■■□□□ 1.94
LAPTM4BQ86VI4 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
LAPTM4BQ86VI4 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC27.16■■□□□ 1.94
LAPTM4BQ86VI4 AL031258.1-201ENST00000623562 325 ntBASIC27.13■■□□□ 1.93
LAPTM4BQ86VI4 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC27.13■■□□□ 1.93
LAPTM4BQ86VI4 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC27.12■■□□□ 1.93
LAPTM4BQ86VI4 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC27.11■■□□□ 1.93
LAPTM4BQ86VI4 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
LAPTM4BQ86VI4 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC27.1■■□□□ 1.93
LAPTM4BQ86VI4 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
LAPTM4BQ86VI4 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC27.09■■□□□ 1.93
LAPTM4BQ86VI4 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
LAPTM4BQ86VI4 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
LAPTM4BQ86VI4 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
LAPTM4BQ86VI4 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC27.05■■□□□ 1.92
LAPTM4BQ86VI4 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC27.04■■□□□ 1.92
LAPTM4BQ86VI4 AC145285.7-201ENST00000614819 1539 ntBASIC27.04■■□□□ 1.92
LAPTM4BQ86VI4 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
LAPTM4BQ86VI4 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC27.01■■□□□ 1.92
LAPTM4BQ86VI4 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
LAPTM4BQ86VI4 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
LAPTM4BQ86VI4 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
LAPTM4BQ86VI4 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC26.97■■□□□ 1.91
LAPTM4BQ86VI4 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
LAPTM4BQ86VI4 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
LAPTM4BQ86VI4 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC26.95■■□□□ 1.9
LAPTM4BQ86VI4 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC26.94■■□□□ 1.9
LAPTM4BQ86VI4 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
LAPTM4BQ86VI4 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC26.93■■□□□ 1.9
LAPTM4BQ86VI4 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
LAPTM4BQ86VI4 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC26.9■■□□□ 1.9
LAPTM4BQ86VI4 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC26.85■■□□□ 1.89
LAPTM4BQ86VI4 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC26.85■■□□□ 1.89
LAPTM4BQ86VI4 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC26.84■■□□□ 1.89
LAPTM4BQ86VI4 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC26.84■■□□□ 1.89
LAPTM4BQ86VI4 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
LAPTM4BQ86VI4 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC26.8■■□□□ 1.88
LAPTM4BQ86VI4 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
LAPTM4BQ86VI4 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
LAPTM4BQ86VI4 EBPL-203ENST00000378270 579 ntTSL 2 BASIC26.75■■□□□ 1.87
LAPTM4BQ86VI4 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
LAPTM4BQ86VI4 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC26.73■■□□□ 1.87
LAPTM4BQ86VI4 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC26.72■■□□□ 1.87
LAPTM4BQ86VI4 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC26.71■■□□□ 1.87
LAPTM4BQ86VI4 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC26.7■■□□□ 1.86
LAPTM4BQ86VI4 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC26.67■■□□□ 1.86
LAPTM4BQ86VI4 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC26.67■■□□□ 1.86
LAPTM4BQ86VI4 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
LAPTM4BQ86VI4 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
LAPTM4BQ86VI4 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC26.63■■□□□ 1.85
LAPTM4BQ86VI4 MVK-208ENST00000539696 608 ntTSL 5 BASIC26.61■■□□□ 1.85
LAPTM4BQ86VI4 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
LAPTM4BQ86VI4 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
LAPTM4BQ86VI4 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
LAPTM4BQ86VI4 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC26.6■■□□□ 1.85
LAPTM4BQ86VI4 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC26.59■■□□□ 1.85
LAPTM4BQ86VI4 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC26.58■■□□□ 1.85
LAPTM4BQ86VI4 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC26.56■■□□□ 1.84
LAPTM4BQ86VI4 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC26.54■■□□□ 1.84
LAPTM4BQ86VI4 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC26.54■■□□□ 1.84
LAPTM4BQ86VI4 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
LAPTM4BQ86VI4 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
LAPTM4BQ86VI4 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC26.52■■□□□ 1.84
LAPTM4BQ86VI4 RARRES2P7-201ENST00000567349 469 ntBASIC26.51■■□□□ 1.83
LAPTM4BQ86VI4 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC26.5■■□□□ 1.83
LAPTM4BQ86VI4 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
LAPTM4BQ86VI4 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC26.49■■□□□ 1.83
LAPTM4BQ86VI4 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
LAPTM4BQ86VI4 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
LAPTM4BQ86VI4 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
LAPTM4BQ86VI4 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC26.44■■□□□ 1.82
LAPTM4BQ86VI4 KLF16-203ENST00000592313 508 ntTSL 3 BASIC26.44■■□□□ 1.82
LAPTM4BQ86VI4 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
LAPTM4BQ86VI4 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
LAPTM4BQ86VI4 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC26.4■■□□□ 1.82
LAPTM4BQ86VI4 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC26.39■■□□□ 1.82
LAPTM4BQ86VI4 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC26.38■■□□□ 1.81
LAPTM4BQ86VI4 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC26.38■■□□□ 1.81
LAPTM4BQ86VI4 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC26.38■■□□□ 1.81
LAPTM4BQ86VI4 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC26.38■■□□□ 1.81
LAPTM4BQ86VI4 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC26.38■■□□□ 1.81
LAPTM4BQ86VI4 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
LAPTM4BQ86VI4 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
LAPTM4BQ86VI4 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Retrieved 100 of 98,524 protein–RNA pairs in 14 ms