Protein–RNA interactions for Protein: Q53RY4

KRTCAP3, Keratinocyte-associated protein 3, humanhuman

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTCAP3Q53RY4 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC26.38■■□□□ 1.81
KRTCAP3Q53RY4 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC26.35■■□□□ 1.81
KRTCAP3Q53RY4 ILK-212ENST00000532063 1617 ntTSL 2 BASIC26.32■■□□□ 1.8
KRTCAP3Q53RY4 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
KRTCAP3Q53RY4 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
KRTCAP3Q53RY4 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC26.29■■□□□ 1.8
KRTCAP3Q53RY4 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
KRTCAP3Q53RY4 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC26.24■■□□□ 1.79
KRTCAP3Q53RY4 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC26.23■■□□□ 1.79
KRTCAP3Q53RY4 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
KRTCAP3Q53RY4 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC26.22■■□□□ 1.79
KRTCAP3Q53RY4 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC26.22■■□□□ 1.79
KRTCAP3Q53RY4 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC26.21■■□□□ 1.79
KRTCAP3Q53RY4 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC26.17■■□□□ 1.78
KRTCAP3Q53RY4 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC26.15■■□□□ 1.78
KRTCAP3Q53RY4 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
KRTCAP3Q53RY4 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
KRTCAP3Q53RY4 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
KRTCAP3Q53RY4 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC26.09■■□□□ 1.77
KRTCAP3Q53RY4 EBPL-203ENST00000378270 579 ntTSL 2 BASIC26.08■■□□□ 1.77
KRTCAP3Q53RY4 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
KRTCAP3Q53RY4 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC26.07■■□□□ 1.76
KRTCAP3Q53RY4 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC26.05■■□□□ 1.76
KRTCAP3Q53RY4 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC26.05■■□□□ 1.76
KRTCAP3Q53RY4 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC26.04■■□□□ 1.76
KRTCAP3Q53RY4 RARRES2P7-201ENST00000567349 469 ntBASIC26.03■■□□□ 1.76
KRTCAP3Q53RY4 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC26.03■■□□□ 1.76
KRTCAP3Q53RY4 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC26■■□□□ 1.75
KRTCAP3Q53RY4 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC25.99■■□□□ 1.75
KRTCAP3Q53RY4 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
KRTCAP3Q53RY4 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC25.97■■□□□ 1.75
KRTCAP3Q53RY4 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC25.96■■□□□ 1.75
KRTCAP3Q53RY4 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.75
KRTCAP3Q53RY4 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC25.95■■□□□ 1.74
KRTCAP3Q53RY4 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC25.92■■□□□ 1.74
KRTCAP3Q53RY4 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC25.92■■□□□ 1.74
KRTCAP3Q53RY4 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
KRTCAP3Q53RY4 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC25.92■■□□□ 1.74
KRTCAP3Q53RY4 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC25.91■■□□□ 1.74
KRTCAP3Q53RY4 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC25.9■■□□□ 1.74
KRTCAP3Q53RY4 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.73
KRTCAP3Q53RY4 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC25.87■■□□□ 1.73
KRTCAP3Q53RY4 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC25.84■■□□□ 1.73
KRTCAP3Q53RY4 KLF16-203ENST00000592313 508 ntTSL 3 BASIC25.82■■□□□ 1.72
KRTCAP3Q53RY4 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
KRTCAP3Q53RY4 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
KRTCAP3Q53RY4 AC097358.2-201ENST00000607541 1159 ntBASIC25.8■■□□□ 1.72
KRTCAP3Q53RY4 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC25.79■■□□□ 1.72
KRTCAP3Q53RY4 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
KRTCAP3Q53RY4 SETD8P1-201ENST00000623146 1180 ntBASIC25.78■■□□□ 1.72
KRTCAP3Q53RY4 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC25.78■■□□□ 1.72
KRTCAP3Q53RY4 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
KRTCAP3Q53RY4 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
KRTCAP3Q53RY4 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC25.73■■□□□ 1.71
KRTCAP3Q53RY4 MVK-208ENST00000539696 608 ntTSL 5 BASIC25.73■■□□□ 1.71
KRTCAP3Q53RY4 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC25.71■■□□□ 1.71
KRTCAP3Q53RY4 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC25.69■■□□□ 1.7
KRTCAP3Q53RY4 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC25.69■■□□□ 1.7
KRTCAP3Q53RY4 AC136428.2-201ENST00000563187 214 ntBASIC25.67■■□□□ 1.7
KRTCAP3Q53RY4 AC145285.7-201ENST00000614819 1539 ntBASIC25.66■■□□□ 1.7
KRTCAP3Q53RY4 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC25.62■■□□□ 1.69
KRTCAP3Q53RY4 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
KRTCAP3Q53RY4 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
KRTCAP3Q53RY4 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
KRTCAP3Q53RY4 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC25.55■■□□□ 1.68
KRTCAP3Q53RY4 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
KRTCAP3Q53RY4 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
KRTCAP3Q53RY4 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC25.54■■□□□ 1.68
KRTCAP3Q53RY4 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
KRTCAP3Q53RY4 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC25.52■■□□□ 1.68
KRTCAP3Q53RY4 SUZ12P1-203ENST00000578195 985 ntBASIC25.52■■□□□ 1.68
KRTCAP3Q53RY4 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC25.51■■□□□ 1.67
KRTCAP3Q53RY4 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
KRTCAP3Q53RY4 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
KRTCAP3Q53RY4 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
KRTCAP3Q53RY4 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC25.49■■□□□ 1.67
KRTCAP3Q53RY4 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
KRTCAP3Q53RY4 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC25.47■■□□□ 1.67
KRTCAP3Q53RY4 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC25.47■■□□□ 1.67
KRTCAP3Q53RY4 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC25.46■■□□□ 1.67
KRTCAP3Q53RY4 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
KRTCAP3Q53RY4 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
KRTCAP3Q53RY4 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC25.45■■□□□ 1.66
KRTCAP3Q53RY4 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
KRTCAP3Q53RY4 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC25.42■■□□□ 1.66
KRTCAP3Q53RY4 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
KRTCAP3Q53RY4 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC25.4■■□□□ 1.66
KRTCAP3Q53RY4 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
KRTCAP3Q53RY4 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC25.37■■□□□ 1.65
KRTCAP3Q53RY4 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
KRTCAP3Q53RY4 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC25.35■■□□□ 1.65
KRTCAP3Q53RY4 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
KRTCAP3Q53RY4 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC25.34■■□□□ 1.65
KRTCAP3Q53RY4 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC25.33■■□□□ 1.65
KRTCAP3Q53RY4 CAHM-201ENST00000604200 896 ntBASIC25.32■■□□□ 1.64
KRTCAP3Q53RY4 RPS2P35-201ENST00000443417 897 ntBASIC25.31■■□□□ 1.64
KRTCAP3Q53RY4 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
KRTCAP3Q53RY4 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
KRTCAP3Q53RY4 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC25.3■■□□□ 1.64
KRTCAP3Q53RY4 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC25.3■■□□□ 1.64
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms