Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
CPNE3O75131 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC27.71■■■□□ 2.03
CPNE3O75131 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC27.68■■■□□ 2.02
CPNE3O75131 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC27.67■■■□□ 2.02
CPNE3O75131 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
CPNE3O75131 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
CPNE3O75131 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC27.63■■■□□ 2.01
CPNE3O75131 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC27.62■■■□□ 2.01
CPNE3O75131 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
CPNE3O75131 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
CPNE3O75131 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC27.55■■■□□ 2
CPNE3O75131 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC27.55■■■□□ 2
CPNE3O75131 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC27.55■■■□□ 2
CPNE3O75131 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC27.53■■■□□ 2
CPNE3O75131 AL031258.1-201ENST00000623562 325 ntBASIC27.53■■■□□ 2
CPNE3O75131 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
CPNE3O75131 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
CPNE3O75131 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC27.5■■□□□ 1.99
CPNE3O75131 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC27.47■■□□□ 1.99
CPNE3O75131 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC27.41■■□□□ 1.98
CPNE3O75131 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
CPNE3O75131 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC27.38■■□□□ 1.97
CPNE3O75131 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
CPNE3O75131 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC27.37■■□□□ 1.97
CPNE3O75131 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC27.37■■□□□ 1.97
CPNE3O75131 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC27.36■■□□□ 1.97
CPNE3O75131 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
CPNE3O75131 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC27.33■■□□□ 1.97
CPNE3O75131 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
CPNE3O75131 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC27.3■■□□□ 1.96
CPNE3O75131 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC27.27■■□□□ 1.96
CPNE3O75131 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC27.25■■□□□ 1.95
CPNE3O75131 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
CPNE3O75131 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
CPNE3O75131 EBPL-203ENST00000378270 579 ntTSL 2 BASIC27.23■■□□□ 1.95
CPNE3O75131 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC27.22■■□□□ 1.95
CPNE3O75131 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC27.21■■□□□ 1.95
CPNE3O75131 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
CPNE3O75131 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC27.19■■□□□ 1.94
CPNE3O75131 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
CPNE3O75131 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC27.16■■□□□ 1.94
CPNE3O75131 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
CPNE3O75131 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC27.14■■□□□ 1.94
CPNE3O75131 AC145285.7-201ENST00000614819 1539 ntBASIC27.13■■□□□ 1.93
CPNE3O75131 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC27.1■■□□□ 1.93
CPNE3O75131 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC27.09■■□□□ 1.93
CPNE3O75131 RARRES2P7-201ENST00000567349 469 ntBASIC27.09■■□□□ 1.93
CPNE3O75131 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC27.09■■□□□ 1.93
CPNE3O75131 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
CPNE3O75131 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC27.05■■□□□ 1.92
CPNE3O75131 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
CPNE3O75131 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
CPNE3O75131 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
CPNE3O75131 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC26.98■■□□□ 1.91
CPNE3O75131 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC26.97■■□□□ 1.91
CPNE3O75131 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
CPNE3O75131 MVK-208ENST00000539696 608 ntTSL 5 BASIC26.97■■□□□ 1.91
CPNE3O75131 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC26.95■■□□□ 1.9
CPNE3O75131 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC26.95■■□□□ 1.9
CPNE3O75131 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC26.95■■□□□ 1.9
CPNE3O75131 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC26.94■■□□□ 1.9
CPNE3O75131 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC26.94■■□□□ 1.9
CPNE3O75131 KLF16-203ENST00000592313 508 ntTSL 3 BASIC26.94■■□□□ 1.9
CPNE3O75131 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
CPNE3O75131 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC26.93■■□□□ 1.9
CPNE3O75131 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC26.92■■□□□ 1.9
CPNE3O75131 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC26.92■■□□□ 1.9
CPNE3O75131 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
CPNE3O75131 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC26.88■■□□□ 1.89
CPNE3O75131 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC26.87■■□□□ 1.89
CPNE3O75131 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC26.87■■□□□ 1.89
CPNE3O75131 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC26.86■■□□□ 1.89
CPNE3O75131 SETD8P1-201ENST00000623146 1180 ntBASIC26.86■■□□□ 1.89
CPNE3O75131 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC26.83■■□□□ 1.89
CPNE3O75131 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
CPNE3O75131 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC26.82■■□□□ 1.88
CPNE3O75131 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
CPNE3O75131 AC097358.2-201ENST00000607541 1159 ntBASIC26.81■■□□□ 1.88
CPNE3O75131 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
CPNE3O75131 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
CPNE3O75131 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC26.79■■□□□ 1.88
CPNE3O75131 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
CPNE3O75131 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC26.79■■□□□ 1.88
CPNE3O75131 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
CPNE3O75131 AC136428.2-201ENST00000563187 214 ntBASIC26.73■■□□□ 1.87
CPNE3O75131 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC26.73■■□□□ 1.87
CPNE3O75131 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
CPNE3O75131 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC26.7■■□□□ 1.86
CPNE3O75131 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
CPNE3O75131 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
CPNE3O75131 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC26.67■■□□□ 1.86
CPNE3O75131 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC26.65■■□□□ 1.86
CPNE3O75131 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
CPNE3O75131 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
CPNE3O75131 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC26.62■■□□□ 1.85
CPNE3O75131 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
CPNE3O75131 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC26.6■■□□□ 1.85
CPNE3O75131 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
CPNE3O75131 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC26.59■■□□□ 1.85
CPNE3O75131 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
Retrieved 100 of 98,524 protein–RNA pairs in 71.5 ms