Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC33.7■■■□□ 2.99
ATP2A1O14983 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC33.69■■■□□ 2.98
ATP2A1O14983 AL031258.1-201ENST00000623562 325 ntBASIC33.69■■■□□ 2.98
ATP2A1O14983 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC33.63■■■□□ 2.97
ATP2A1O14983 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC33.59■■■□□ 2.97
ATP2A1O14983 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC33.56■■■□□ 2.96
ATP2A1O14983 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC33.55■■■□□ 2.96
ATP2A1O14983 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC33.51■■■□□ 2.95
ATP2A1O14983 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC33.51■■■□□ 2.95
ATP2A1O14983 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC33.48■■■□□ 2.95
ATP2A1O14983 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC33.46■■■□□ 2.95
ATP2A1O14983 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC33.42■■■□□ 2.94
ATP2A1O14983 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC33.39■■■□□ 2.94
ATP2A1O14983 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC33.39■■■□□ 2.94
ATP2A1O14983 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC33.39■■■□□ 2.94
ATP2A1O14983 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC33.36■■■□□ 2.93
ATP2A1O14983 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC33.35■■■□□ 2.93
ATP2A1O14983 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC33.34■■■□□ 2.93
ATP2A1O14983 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC33.33■■■□□ 2.93
ATP2A1O14983 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC33.29■■■□□ 2.92
ATP2A1O14983 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC33.29■■■□□ 2.92
ATP2A1O14983 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC33.27■■■□□ 2.92
ATP2A1O14983 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC33.26■■■□□ 2.91
ATP2A1O14983 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC33.26■■■□□ 2.91
ATP2A1O14983 EBPL-203ENST00000378270 579 ntTSL 2 BASIC33.24■■■□□ 2.91
ATP2A1O14983 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC33.23■■■□□ 2.91
ATP2A1O14983 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC33.21■■■□□ 2.91
ATP2A1O14983 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC33.18■■■□□ 2.9
ATP2A1O14983 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC33.15■■■□□ 2.9
ATP2A1O14983 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC33.13■■■□□ 2.89
ATP2A1O14983 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC33.13■■■□□ 2.89
ATP2A1O14983 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC33.12■■■□□ 2.89
ATP2A1O14983 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC33.11■■■□□ 2.89
ATP2A1O14983 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC33.06■■■□□ 2.88
ATP2A1O14983 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC33.06■■■□□ 2.88
ATP2A1O14983 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC33.04■■■□□ 2.88
ATP2A1O14983 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC33.03■■■□□ 2.88
ATP2A1O14983 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC33.03■■■□□ 2.88
ATP2A1O14983 RARRES2P7-201ENST00000567349 469 ntBASIC33■■■□□ 2.87
ATP2A1O14983 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC33■■■□□ 2.87
ATP2A1O14983 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC32.94■■■□□ 2.86
ATP2A1O14983 AC145285.7-201ENST00000614819 1539 ntBASIC32.94■■■□□ 2.86
ATP2A1O14983 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC32.94■■■□□ 2.86
ATP2A1O14983 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC32.92■■■□□ 2.86
ATP2A1O14983 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC32.91■■■□□ 2.86
ATP2A1O14983 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC32.9■■■□□ 2.86
ATP2A1O14983 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC32.88■■■□□ 2.85
ATP2A1O14983 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC32.87■■■□□ 2.85
ATP2A1O14983 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC32.87■■■□□ 2.85
ATP2A1O14983 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC32.86■■■□□ 2.85
ATP2A1O14983 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC32.86■■■□□ 2.85
ATP2A1O14983 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC32.85■■■□□ 2.85
ATP2A1O14983 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC32.84■■■□□ 2.85
ATP2A1O14983 KLF16-203ENST00000592313 508 ntTSL 3 BASIC32.83■■■□□ 2.85
ATP2A1O14983 MVK-208ENST00000539696 608 ntTSL 5 BASIC32.81■■■□□ 2.84
ATP2A1O14983 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC32.78■■■□□ 2.84
ATP2A1O14983 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC32.76■■■□□ 2.84
ATP2A1O14983 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC32.76■■■□□ 2.83
ATP2A1O14983 SETD8P1-201ENST00000623146 1180 ntBASIC32.75■■■□□ 2.83
ATP2A1O14983 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC32.75■■■□□ 2.83
ATP2A1O14983 AC097358.2-201ENST00000607541 1159 ntBASIC32.74■■■□□ 2.83
ATP2A1O14983 AC136428.2-201ENST00000563187 214 ntBASIC32.73■■■□□ 2.83
ATP2A1O14983 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC32.7■■■□□ 2.83
ATP2A1O14983 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC32.7■■■□□ 2.83
ATP2A1O14983 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC32.69■■■□□ 2.82
ATP2A1O14983 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC32.65■■■□□ 2.82
ATP2A1O14983 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC32.63■■■□□ 2.81
ATP2A1O14983 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC32.63■■■□□ 2.81
ATP2A1O14983 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC32.6■■■□□ 2.81
ATP2A1O14983 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC32.59■■■□□ 2.81
ATP2A1O14983 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC32.58■■■□□ 2.81
ATP2A1O14983 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC32.58■■■□□ 2.81
ATP2A1O14983 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC32.57■■■□□ 2.8
ATP2A1O14983 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC32.57■■■□□ 2.8
ATP2A1O14983 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC32.57■■■□□ 2.8
ATP2A1O14983 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC32.54■■■□□ 2.8
ATP2A1O14983 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC32.53■■■□□ 2.8
ATP2A1O14983 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC32.53■■■□□ 2.8
ATP2A1O14983 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC32.51■■■□□ 2.8
ATP2A1O14983 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC32.51■■■□□ 2.8
ATP2A1O14983 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC32.51■■■□□ 2.79
ATP2A1O14983 SUZ12P1-203ENST00000578195 985 ntBASIC32.51■■■□□ 2.79
ATP2A1O14983 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC32.5■■■□□ 2.79
ATP2A1O14983 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC32.48■■■□□ 2.79
ATP2A1O14983 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC32.47■■■□□ 2.79
ATP2A1O14983 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC32.44■■■□□ 2.78
ATP2A1O14983 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC32.42■■■□□ 2.78
ATP2A1O14983 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC32.39■■■□□ 2.78
ATP2A1O14983 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC32.39■■■□□ 2.78
ATP2A1O14983 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC32.39■■■□□ 2.78
ATP2A1O14983 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC32.39■■■□□ 2.78
ATP2A1O14983 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
ATP2A1O14983 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC32.37■■■□□ 2.77
ATP2A1O14983 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC32.36■■■□□ 2.77
ATP2A1O14983 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC32.35■■■□□ 2.77
ATP2A1O14983 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC32.34■■■□□ 2.77
ATP2A1O14983 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC32.34■■■□□ 2.77
ATP2A1O14983 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC32.34■■■□□ 2.77
ATP2A1O14983 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC32.34■■■□□ 2.77
ATP2A1O14983 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC32.32■■■□□ 2.76
Retrieved 100 of 98,524 protein–RNA pairs in 61.6 ms