Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC25.02■■□□□ 1.6
SHKBP1Q8TBC3 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC25.01■■□□□ 1.59
SHKBP1Q8TBC3 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
SHKBP1Q8TBC3 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC25.01■■□□□ 1.59
SHKBP1Q8TBC3 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC25.01■■□□□ 1.59
SHKBP1Q8TBC3 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC25.01■■□□□ 1.59
SHKBP1Q8TBC3 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC25.01■■□□□ 1.59
SHKBP1Q8TBC3 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
SHKBP1Q8TBC3 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC25■■□□□ 1.59
SHKBP1Q8TBC3 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
SHKBP1Q8TBC3 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
SHKBP1Q8TBC3 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC25■■□□□ 1.59
SHKBP1Q8TBC3 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
SHKBP1Q8TBC3 BX664725.1-201ENST00000438252 379 ntBASIC25■■□□□ 1.59
SHKBP1Q8TBC3 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC25■■□□□ 1.59
SHKBP1Q8TBC3 KRT125P-201ENST00000546827 989 ntBASIC25■■□□□ 1.59
SHKBP1Q8TBC3 AC120024.1-201ENST00000562672 995 ntBASIC25■■□□□ 1.59
SHKBP1Q8TBC3 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC25■■□□□ 1.59
SHKBP1Q8TBC3 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC25■■□□□ 1.59
SHKBP1Q8TBC3 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC24.99■■□□□ 1.59
SHKBP1Q8TBC3 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC24.99■■□□□ 1.59
SHKBP1Q8TBC3 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC24.99■■□□□ 1.59
SHKBP1Q8TBC3 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
SHKBP1Q8TBC3 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
SHKBP1Q8TBC3 MIR4787-201ENST00000607364 84 ntBASIC24.99■■□□□ 1.59
SHKBP1Q8TBC3 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
SHKBP1Q8TBC3 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC24.98■■□□□ 1.59
SHKBP1Q8TBC3 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC24.98■■□□□ 1.59
SHKBP1Q8TBC3 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC24.98■■□□□ 1.59
SHKBP1Q8TBC3 MTURN-203ENST00000409688 843 ntTSL 2 BASIC24.98■■□□□ 1.59
SHKBP1Q8TBC3 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
SHKBP1Q8TBC3 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC24.98■■□□□ 1.59
SHKBP1Q8TBC3 CREM-210ENST00000374721 2020 ntTSL 5 BASIC24.98■■□□□ 1.59
SHKBP1Q8TBC3 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
SHKBP1Q8TBC3 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC24.97■■□□□ 1.59
SHKBP1Q8TBC3 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
SHKBP1Q8TBC3 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC24.97■■□□□ 1.59
SHKBP1Q8TBC3 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC24.97■■□□□ 1.59
SHKBP1Q8TBC3 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC24.97■■□□□ 1.59
SHKBP1Q8TBC3 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC24.97■■□□□ 1.59
SHKBP1Q8TBC3 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
SHKBP1Q8TBC3 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC24.96■■□□□ 1.59
SHKBP1Q8TBC3 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
SHKBP1Q8TBC3 GRAMD4P7-201ENST00000578182 1232 ntBASIC24.96■■□□□ 1.59
SHKBP1Q8TBC3 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC24.96■■□□□ 1.59
SHKBP1Q8TBC3 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC24.95■■□□□ 1.59
SHKBP1Q8TBC3 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC24.95■■□□□ 1.59
SHKBP1Q8TBC3 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
SHKBP1Q8TBC3 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
SHKBP1Q8TBC3 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC24.95■■□□□ 1.58
SHKBP1Q8TBC3 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
SHKBP1Q8TBC3 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
SHKBP1Q8TBC3 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC24.95■■□□□ 1.58
SHKBP1Q8TBC3 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC24.95■■□□□ 1.58
SHKBP1Q8TBC3 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC24.95■■□□□ 1.58
SHKBP1Q8TBC3 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC24.95■■□□□ 1.58
SHKBP1Q8TBC3 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
SHKBP1Q8TBC3 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
SHKBP1Q8TBC3 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
SHKBP1Q8TBC3 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
SHKBP1Q8TBC3 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC24.94■■□□□ 1.58
SHKBP1Q8TBC3 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC24.94■■□□□ 1.58
SHKBP1Q8TBC3 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
SHKBP1Q8TBC3 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC24.94■■□□□ 1.58
SHKBP1Q8TBC3 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC24.94■■□□□ 1.58
SHKBP1Q8TBC3 AC137630.3-201ENST00000607245 391 ntBASIC24.94■■□□□ 1.58
SHKBP1Q8TBC3 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC24.94■■□□□ 1.58
SHKBP1Q8TBC3 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC24.93■■□□□ 1.58
SHKBP1Q8TBC3 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
SHKBP1Q8TBC3 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
SHKBP1Q8TBC3 UNC93B8-201ENST00000511903 705 ntBASIC24.93■■□□□ 1.58
SHKBP1Q8TBC3 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC24.93■■□□□ 1.58
SHKBP1Q8TBC3 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC24.93■■□□□ 1.58
SHKBP1Q8TBC3 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC24.93■■□□□ 1.58
SHKBP1Q8TBC3 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
SHKBP1Q8TBC3 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC24.92■■□□□ 1.58
SHKBP1Q8TBC3 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC24.92■■□□□ 1.58
SHKBP1Q8TBC3 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC24.92■■□□□ 1.58
SHKBP1Q8TBC3 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
SHKBP1Q8TBC3 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
SHKBP1Q8TBC3 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC24.92■■□□□ 1.58
SHKBP1Q8TBC3 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC24.91■■□□□ 1.58
SHKBP1Q8TBC3 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC24.91■■□□□ 1.58
SHKBP1Q8TBC3 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC24.91■■□□□ 1.58
SHKBP1Q8TBC3 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC24.91■■□□□ 1.58
SHKBP1Q8TBC3 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC24.91■■□□□ 1.58
SHKBP1Q8TBC3 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC24.91■■□□□ 1.58
SHKBP1Q8TBC3 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC24.9■■□□□ 1.58
SHKBP1Q8TBC3 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC24.9■■□□□ 1.58
SHKBP1Q8TBC3 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC24.9■■□□□ 1.58
SHKBP1Q8TBC3 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC24.9■■□□□ 1.58
SHKBP1Q8TBC3 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC24.89■■□□□ 1.58
SHKBP1Q8TBC3 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC24.89■■□□□ 1.58
SHKBP1Q8TBC3 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC24.89■■□□□ 1.58
SHKBP1Q8TBC3 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
SHKBP1Q8TBC3 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC24.89■■□□□ 1.58
SHKBP1Q8TBC3 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC24.89■■□□□ 1.58
SHKBP1Q8TBC3 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
SHKBP1Q8TBC3 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC24.89■■□□□ 1.57
SHKBP1Q8TBC3 AC021242.3-201ENST00000607598 1377 ntBASIC24.89■■□□□ 1.57
Retrieved 100 of 98,524 protein–RNA pairs in 154.9 ms