Protein–RNA interactions for Protein: Q5T4S7

UBR4, E3 ubiquitin-protein ligase UBR4, humanhuman

Predictions only

Length 5,183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4Q5T4S7 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
UBR4Q5T4S7 AC120024.1-201ENST00000562672 995 ntBASIC13.45□□□□□ -0.26
UBR4Q5T4S7 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
UBR4Q5T4S7 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
UBR4Q5T4S7 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC13.44□□□□□ -0.26
UBR4Q5T4S7 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
UBR4Q5T4S7 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC13.44□□□□□ -0.26
UBR4Q5T4S7 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC13.44□□□□□ -0.26
UBR4Q5T4S7 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
UBR4Q5T4S7 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
UBR4Q5T4S7 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
UBR4Q5T4S7 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC13.43□□□□□ -0.26
UBR4Q5T4S7 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC13.43□□□□□ -0.26
UBR4Q5T4S7 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC13.43□□□□□ -0.26
UBR4Q5T4S7 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC13.43□□□□□ -0.26
UBR4Q5T4S7 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC13.43□□□□□ -0.26
UBR4Q5T4S7 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
UBR4Q5T4S7 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
UBR4Q5T4S7 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
UBR4Q5T4S7 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
UBR4Q5T4S7 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
UBR4Q5T4S7 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC13.43□□□□□ -0.26
UBR4Q5T4S7 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
UBR4Q5T4S7 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC13.43□□□□□ -0.26
UBR4Q5T4S7 AC104771.1-201ENST00000603335 964 ntBASIC13.43□□□□□ -0.26
UBR4Q5T4S7 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
UBR4Q5T4S7 MAP2K4P1-201ENST00000438453 1195 ntBASIC13.42□□□□□ -0.26
UBR4Q5T4S7 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
UBR4Q5T4S7 MEST-211ENST00000437945 1455 ntTSL 5 BASIC13.42□□□□□ -0.26
UBR4Q5T4S7 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
UBR4Q5T4S7 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
UBR4Q5T4S7 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC13.41□□□□□ -0.26
UBR4Q5T4S7 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
UBR4Q5T4S7 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
UBR4Q5T4S7 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC13.41□□□□□ -0.26
UBR4Q5T4S7 TFPT-201ENST00000391757 774 ntTSL 5 BASIC13.41□□□□□ -0.26
UBR4Q5T4S7 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
UBR4Q5T4S7 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
UBR4Q5T4S7 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC13.41□□□□□ -0.26
UBR4Q5T4S7 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
UBR4Q5T4S7 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC13.41□□□□□ -0.26
UBR4Q5T4S7 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC13.41□□□□□ -0.26
UBR4Q5T4S7 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
UBR4Q5T4S7 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
UBR4Q5T4S7 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
UBR4Q5T4S7 MAX-217ENST00000557277 728 ntTSL 3 BASIC13.41□□□□□ -0.26
UBR4Q5T4S7 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
UBR4Q5T4S7 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
UBR4Q5T4S7 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
UBR4Q5T4S7 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
UBR4Q5T4S7 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC13.4□□□□□ -0.26
UBR4Q5T4S7 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
UBR4Q5T4S7 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
UBR4Q5T4S7 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC13.4□□□□□ -0.26
UBR4Q5T4S7 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC13.4□□□□□ -0.26
UBR4Q5T4S7 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.27
UBR4Q5T4S7 DUX4L2-201ENST00000561772 1275 ntBASIC13.4□□□□□ -0.27
UBR4Q5T4S7 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC13.4□□□□□ -0.27
UBR4Q5T4S7 DUX4L6-201ENST00000626483 1275 ntBASIC13.4□□□□□ -0.27
UBR4Q5T4S7 DUX4L1-201ENST00000627662 1275 ntBASIC13.4□□□□□ -0.27
UBR4Q5T4S7 DUX4L8-201ENST00000629013 1275 ntBASIC13.4□□□□□ -0.27
UBR4Q5T4S7 DUX4L3-201ENST00000630187 1275 ntBASIC13.4□□□□□ -0.27
UBR4Q5T4S7 DUX4L7-201ENST00000630678 1275 ntBASIC13.4□□□□□ -0.27
UBR4Q5T4S7 DUX4L5-201ENST00000630834 1275 ntBASIC13.4□□□□□ -0.27
UBR4Q5T4S7 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
UBR4Q5T4S7 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
UBR4Q5T4S7 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
UBR4Q5T4S7 CDCA4P2-201ENST00000441182 718 ntBASIC13.39□□□□□ -0.27
UBR4Q5T4S7 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC13.39□□□□□ -0.27
UBR4Q5T4S7 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
UBR4Q5T4S7 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
UBR4Q5T4S7 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC13.38□□□□□ -0.27
UBR4Q5T4S7 YBX1P1-201ENST00000445822 960 ntBASIC13.38□□□□□ -0.27
UBR4Q5T4S7 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
UBR4Q5T4S7 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
UBR4Q5T4S7 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC13.38□□□□□ -0.27
UBR4Q5T4S7 SRD5A1P1-201ENST00000442297 786 ntBASIC13.38□□□□□ -0.27
UBR4Q5T4S7 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
UBR4Q5T4S7 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
UBR4Q5T4S7 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
UBR4Q5T4S7 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
UBR4Q5T4S7 AL499627.2-201ENST00000606283 725 ntBASIC13.37□□□□□ -0.27
UBR4Q5T4S7 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
UBR4Q5T4S7 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC13.37□□□□□ -0.27
UBR4Q5T4S7 MIR4281-201ENST00000580852 62 ntBASIC13.37□□□□□ -0.27
UBR4Q5T4S7 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC13.37□□□□□ -0.27
UBR4Q5T4S7 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
UBR4Q5T4S7 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
UBR4Q5T4S7 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
UBR4Q5T4S7 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC13.36□□□□□ -0.27
UBR4Q5T4S7 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC13.36□□□□□ -0.27
UBR4Q5T4S7 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
UBR4Q5T4S7 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC13.36□□□□□ -0.27
UBR4Q5T4S7 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
UBR4Q5T4S7 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC13.35□□□□□ -0.27
UBR4Q5T4S7 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
UBR4Q5T4S7 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC13.35□□□□□ -0.27
UBR4Q5T4S7 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
UBR4Q5T4S7 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC13.35□□□□□ -0.27
UBR4Q5T4S7 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms