RNA–Protein interactions for RNA: ENST00000522940.5

COX6C-208, Transcript of cytochrome c oxidase subunit 6C, humanhuman

APPRIS P1 TSL 3 BASIC

Gene COX6C, Length 694 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COX6C-208ENST00000522940 NISCHQ9Y2I1 1504 aa50.6■■■■■ 5.69
COX6C-208ENST00000522940 ABCC9O60706 1549 aa45.82■■■■■ 4.92
COX6C-208ENST00000522940 CCDC180Q9P1Z9 1646 aa45.37■■■■■ 4.85
COX6C-208ENST00000522940 DNAJC5BQ9UF47 199 aa43.45■■■■■ 4.55
COX6C-208ENST00000522940 RB1CC1Q8TDY2 1594 aa43.36■■■■■ 4.53
COX6C-208ENST00000522940 NACADO15069 1562 aa43.02■■■■■ 4.48
COX6C-208ENST00000522940 DCAF8L2P0C7V8 631 aa42.87■■■■■ 4.45
COX6C-208ENST00000522940 PABPN1Q86U42 306 aaKnown RBP eCLIP42.71■■■■■ 4.43
COX6C-208ENST00000522940 UNC13AQ9UPW8 1703 aa42.41■■■■■ 4.38
COX6C-208ENST00000522940 MYO15BQ96JP2 1530 aa42.35■■■■■ 4.37
COX6C-208ENST00000522940 BICRAQ9NZM4 1560 aa42.27■■■■■ 4.36
COX6C-208ENST00000522940 ZCCHC6Q5VYS8 1495 aaKnown RBP41.85■■■■■ 4.29
COX6C-208ENST00000522940 DCAF1Q9Y4B6 1507 aa41.72■■■■■ 4.27
COX6C-208ENST00000522940 SHROOM4Q9ULL8 1493 aa41.47■■■■■ 4.23
COX6C-208ENST00000522940 SCRIBQ14160 1630 aa41.42■■■■■ 4.22
COX6C-208ENST00000522940 CC2D2AQ9P2K1 1620 aa41.33■■■■■ 4.21
COX6C-208ENST00000522940 CECR2Q9BXF3 1484 aa41.28■■■■■ 4.2
COX6C-208ENST00000522940 EIF4G1Q04637 1599 aaKnown RBP41.16■■■■■ 4.18
COX6C-208ENST00000522940 DNAJC5Q9H3Z4 198 aa39.96■■■■□ 3.99
COX6C-208ENST00000522940 NCAPD3P42695 1498 aa39.81■■■■□ 3.96
COX6C-208ENST00000522940 ATAD2BQ9ULI0 1458 aa39.66■■■■□ 3.94
COX6C-208ENST00000522940 CUX2O14529 1486 aa39.5■■■■□ 3.91
COX6C-208ENST00000522940 SMARCA4P51532 1647 aa39.48■■■■□ 3.91
COX6C-208ENST00000522940 ERCC6Q03468 1493 aa39.47■■■■□ 3.91
COX6C-208ENST00000522940 SMARCA2P51531 1590 aa39.41■■■■□ 3.9
COX6C-208ENST00000522940 HMGXB3Q12766 1538 aa39.4■■■■□ 3.9
COX6C-208ENST00000522940 NESP48681 1621 aa39.33■■■■□ 3.89
COX6C-208ENST00000522940 BAZ1AQ9NRL2 1556 aaPredicted RBP39.21■■■■□ 3.87
COX6C-208ENST00000522940 BAZ1BQ9UIG0 1483 aaKnown RBP39.17■■■■□ 3.86
COX6C-208ENST00000522940 PEG3Q9GZU2 1588 aa39.11■■■■□ 3.85
COX6C-208ENST00000522940 MROH2BQ7Z745 1585 aa39.04■■■■□ 3.84
COX6C-208ENST00000522940 THOC2Q8NI27 1593 aaKnown RBP38.87■■■■□ 3.81
COX6C-208ENST00000522940 LAMC3Q9Y6N6 1575 aa38.85■■■■□ 3.81
COX6C-208ENST00000522940 KIF21AQ7Z4S6 1674 aa38.68■■■■□ 3.78
COX6C-208ENST00000522940 PDS5BQ9NTI5 1447 aa38.67■■■■□ 3.78
COX6C-208ENST00000522940 CADPSQ9ULU8 1353 aa38.58■■■■□ 3.77
COX6C-208ENST00000522940 WIZO95785 1651 aa38.51■■■■□ 3.76
COX6C-208ENST00000522940 MRC2Q9UBG0 1479 aa38.36■■■■□ 3.73
COX6C-208ENST00000522940 WDR62O43379 1518 aa38.28■■■■□ 3.72
COX6C-208ENST00000522940 RSF1Q96T23 1441 aaPredicted RBP38.13■■■■□ 3.7
COX6C-208ENST00000522940 CEP164Q9UPV0 1460 aa38.13■■■■□ 3.69
COX6C-208ENST00000522940 FANCD2Q9BXW9 1451 aa38.12■■■■□ 3.69
COX6C-208ENST00000522940 CFTRP13569 1480 aa38.09■■■■□ 3.69
COX6C-208ENST00000522940 TRIM41Q8WV44 630 aa38.04■■■■□ 3.68
COX6C-208ENST00000522940 TOP2AP11388 1531 aaKnown RBP37.94■■■■□ 3.66
COX6C-208ENST00000522940 URB2Q14146 1524 aaKnown RBP37.88■■■■□ 3.65
COX6C-208ENST00000522940 OSCARQ8IYS5 282 aa37.75■■■■□ 3.63
COX6C-208ENST00000522940 CCDC88BA6NC98 1476 aa37.62■■■■□ 3.61
COX6C-208ENST00000522940 ZNF608Q9ULD9 1512 aaPredicted RBP37.48■■■■□ 3.59
COX6C-208ENST00000522940 PRDM2Q13029 1718 aa37.47■■■■□ 3.59
COX6C-208ENST00000522940 IFT140Q96RY7 1462 aa37.39■■■■□ 3.58
COX6C-208ENST00000522940 TOPBP1Q92547 1522 aa37.37■■■■□ 3.57
COX6C-208ENST00000522940 RIMBP3CA6NJZ7 1639 aa37.24■■■■□ 3.55
COX6C-208ENST00000522940 RIMBP3BA6NNM3 1639 aa37.24■■■■□ 3.55
COX6C-208ENST00000522940 RIMBP3Q9UFD9 1639 aa37.24■■■■□ 3.55
COX6C-208ENST00000522940 ABCC8Q09428 1581 aa37.18■■■■□ 3.54
COX6C-208ENST00000522940 DNMBPQ6XZF7 1577 aa37.15■■■■□ 3.54
COX6C-208ENST00000522940 EIF4G3O43432 1585 aaKnown RBP37.13■■■■□ 3.53
COX6C-208ENST00000522940 AQRO60306 1485 aaKnown RBP eCLIP37.11■■■■□ 3.53
COX6C-208ENST00000522940 ARHGEF11O15085 1522 aa37.1■■■■□ 3.53
COX6C-208ENST00000522940 TARBP1Q13395 1621 aaKnown RBP37.07■■■■□ 3.53
COX6C-208ENST00000522940 POLA1P09884 1462 aaPredicted RBP36.99■■■■□ 3.51
COX6C-208ENST00000522940 CYB5RLQ6IPT4 315 aa36.93■■■■□ 3.5
COX6C-208ENST00000522940 RAD54L2Q9Y4B4 1467 aa36.92■■■■□ 3.5
COX6C-208ENST00000522940 CHD1O14646 1710 aa36.89■■■■□ 3.5
COX6C-208ENST00000522940 FBLN2P98095 1184 aa36.86■■■■□ 3.49
COX6C-208ENST00000522940 TDRD9Q8NDG6 1382 aaKnown RBP36.84■■■■□ 3.49
COX6C-208ENST00000522940 SOGA1O94964 1423 aa36.83■■■■□ 3.49
COX6C-208ENST00000522940 ARAP1Q96P48 1450 aa36.75■■■■□ 3.47
COX6C-208ENST00000522940 FGD5Q6ZNL6 1462 aa36.7■■■■□ 3.47
COX6C-208ENST00000522940 CUX1P39880 1505 aa36.67■■■■□ 3.46
COX6C-208ENST00000522940 SNAPC4Q5SXM2 1469 aa36.63■■■■□ 3.45
COX6C-208ENST00000522940 CLASP1Q7Z460 1538 aa36.54■■■■□ 3.44
COX6C-208ENST00000522940 CHMP7Q8WUX9 453 aaPredicted RBP36.53■■■■□ 3.44
COX6C-208ENST00000522940 WDR97A6NE52 1622 aa36.52■■■■□ 3.44
COX6C-208ENST00000522940 TRHP20396 242 aaPredicted RBP36.52■■■■□ 3.44
COX6C-208ENST00000522940 GRIN2BQ13224 1484 aa36.48■■■■□ 3.43
COX6C-208ENST00000522940 MAGI1Q96QZ7 1491 aaPredicted RBP36.48■■■■□ 3.43
COX6C-208ENST00000522940 SYNJ2O15056 1496 aa36.4■■■■□ 3.42
COX6C-208ENST00000522940 SYNJ1O43426 1573 aa36.38■■■■□ 3.41
COX6C-208ENST00000522940 GAPVD1Q14C86 1478 aa36.34■■■■□ 3.41
COX6C-208ENST00000522940 ABCA10Q8WWZ4 1543 aa36.26■■■■□ 3.4
COX6C-208ENST00000522940 PBRM1Q86U86 1689 aa36.24■■■■□ 3.39
COX6C-208ENST00000522940 SUPT5HO00267 1087 aaKnown RBP36.24■■■■□ 3.39
COX6C-208ENST00000522940 ABCA5Q8WWZ7 1642 aa36.21■■■■□ 3.39
COX6C-208ENST00000522940 WRNQ14191 1432 aaPredicted RBP eCLIP36.04■■■■□ 3.36
COX6C-208ENST00000522940 ERCC6L2Q5T890 1561 aa36.03■■■■□ 3.36
COX6C-208ENST00000522940 GRIN2AQ12879 1464 aa36.03■■■■□ 3.36
COX6C-208ENST00000522940 NUP160Q12769 1436 aa35.94■■■■□ 3.34
COX6C-208ENST00000522940 ADAMTS12P58397 1594 aa35.93■■■■□ 3.34
COX6C-208ENST00000522940 CEP170Q5SW79 1584 aa35.93■■■■□ 3.34
COX6C-208ENST00000522940 TOP2BQ02880 1626 aa35.93■■■■□ 3.34
COX6C-208ENST00000522940 BIVM-ERCC5R4GMW8 1640 aa35.91■■■■□ 3.34
COX6C-208ENST00000522940 FHAD1B1AJZ9 1412 aa35.85■■■■□ 3.33
COX6C-208ENST00000522940 SHROOM2Q13796 1616 aa35.78■■■■□ 3.32
COX6C-208ENST00000522940 ERICH3Q5RHP9 1530 aa35.76■■■■□ 3.31
COX6C-208ENST00000522940 JPH4Q96JJ6 628 aa35.63■■■■□ 3.29
COX6C-208ENST00000522940 PRG4Q92954 1404 aaPredicted RBP35.63■■■■□ 3.29
COX6C-208ENST00000522940 AEBP2Q6ZN18 517 aaPredicted RBP35.59■■■■□ 3.29
COX6C-208ENST00000522940 RUSC2Q8N2Y8 1516 aa35.44■■■■□ 3.26
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms