RNA–Protein interactions for RNA: ENST00000441182.1

CDCA4P2-201, Transcript of cell division cycle associated 4 pseudogene 2, humanhuman

BASIC

Gene CDCA4P2, Length 718 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA4P2-201ENST00000441182 NISCHQ9Y2I1 1504 aa52.45■■■■■ 5.99
CDCA4P2-201ENST00000441182 CCDC180Q9P1Z9 1646 aa46.91■■■■■ 5.1
CDCA4P2-201ENST00000441182 ABCC9O60706 1549 aa46.8■■■■■ 5.08
CDCA4P2-201ENST00000441182 RB1CC1Q8TDY2 1594 aa44.58■■■■■ 4.73
CDCA4P2-201ENST00000441182 NACADO15069 1562 aa44.35■■■■■ 4.69
CDCA4P2-201ENST00000441182 DCAF8L2P0C7V8 631 aa44.16■■■■■ 4.66
CDCA4P2-201ENST00000441182 DNAJC5BQ9UF47 199 aa43.87■■■■■ 4.61
CDCA4P2-201ENST00000441182 MYO15BQ96JP2 1530 aa43.83■■■■■ 4.61
CDCA4P2-201ENST00000441182 PABPN1Q86U42 306 aaKnown RBP eCLIP43.65■■■■■ 4.58
CDCA4P2-201ENST00000441182 UNC13AQ9UPW8 1703 aa43.59■■■■■ 4.57
CDCA4P2-201ENST00000441182 ZCCHC6Q5VYS8 1495 aaKnown RBP43.51■■■■■ 4.56
CDCA4P2-201ENST00000441182 BICRAQ9NZM4 1560 aa43.37■■■■■ 4.53
CDCA4P2-201ENST00000441182 DCAF1Q9Y4B6 1507 aa43.33■■■■■ 4.53
CDCA4P2-201ENST00000441182 SCRIBQ14160 1630 aa42.79■■■■■ 4.44
CDCA4P2-201ENST00000441182 SHROOM4Q9ULL8 1493 aa42.72■■■■■ 4.43
CDCA4P2-201ENST00000441182 CC2D2AQ9P2K1 1620 aa42.28■■■■■ 4.36
CDCA4P2-201ENST00000441182 EIF4G1Q04637 1599 aaKnown RBP42.24■■■■■ 4.35
CDCA4P2-201ENST00000441182 CECR2Q9BXF3 1484 aa42.14■■■■■ 4.34
CDCA4P2-201ENST00000441182 NCAPD3P42695 1498 aa40.99■■■■■ 4.15
CDCA4P2-201ENST00000441182 ATAD2BQ9ULI0 1458 aa40.89■■■■■ 4.14
CDCA4P2-201ENST00000441182 SMARCA4P51532 1647 aa40.85■■■■■ 4.13
CDCA4P2-201ENST00000441182 SMARCA2P51531 1590 aa40.72■■■■■ 4.11
CDCA4P2-201ENST00000441182 HMGXB3Q12766 1538 aa40.66■■■■■ 4.1
CDCA4P2-201ENST00000441182 BAZ1AQ9NRL2 1556 aaPredicted RBP40.65■■■■■ 4.1
CDCA4P2-201ENST00000441182 PEG3Q9GZU2 1588 aa40.48■■■■■ 4.07
CDCA4P2-201ENST00000441182 BAZ1BQ9UIG0 1483 aaKnown RBP40.45■■■■■ 4.07
CDCA4P2-201ENST00000441182 MROH2BQ7Z745 1585 aa40.44■■■■■ 4.06
CDCA4P2-201ENST00000441182 ERCC6Q03468 1493 aa40.34■■■■■ 4.05
CDCA4P2-201ENST00000441182 NESP48681 1621 aa40.29■■■■■ 4.04
CDCA4P2-201ENST00000441182 CUX2O14529 1486 aa40.25■■■■■ 4.03
CDCA4P2-201ENST00000441182 DNAJC5Q9H3Z4 198 aa40.09■■■■■ 4.01
CDCA4P2-201ENST00000441182 LAMC3Q9Y6N6 1575 aa39.97■■■■□ 3.99
CDCA4P2-201ENST00000441182 WIZO95785 1651 aa39.92■■■■□ 3.98
CDCA4P2-201ENST00000441182 THOC2Q8NI27 1593 aaKnown RBP39.8■■■■□ 3.96
CDCA4P2-201ENST00000441182 PDS5BQ9NTI5 1447 aa39.75■■■■□ 3.95
CDCA4P2-201ENST00000441182 CADPSQ9ULU8 1353 aa39.75■■■■□ 3.95
CDCA4P2-201ENST00000441182 KIF21AQ7Z4S6 1674 aa39.71■■■■□ 3.95
CDCA4P2-201ENST00000441182 RSF1Q96T23 1441 aaPredicted RBP39.68■■■■□ 3.94
CDCA4P2-201ENST00000441182 TOP2AP11388 1531 aaKnown RBP39.42■■■■□ 3.9
CDCA4P2-201ENST00000441182 MRC2Q9UBG0 1479 aa39.4■■■■□ 3.9
CDCA4P2-201ENST00000441182 CFTRP13569 1480 aa39.34■■■■□ 3.89
CDCA4P2-201ENST00000441182 WDR62O43379 1518 aa39.31■■■■□ 3.88
CDCA4P2-201ENST00000441182 FANCD2Q9BXW9 1451 aa39.27■■■■□ 3.88
CDCA4P2-201ENST00000441182 CEP164Q9UPV0 1460 aa39.26■■■■□ 3.88
CDCA4P2-201ENST00000441182 CCDC88BA6NC98 1476 aa39.02■■■■□ 3.84
CDCA4P2-201ENST00000441182 URB2Q14146 1524 aaKnown RBP38.96■■■■□ 3.83
CDCA4P2-201ENST00000441182 PRDM2Q13029 1718 aa38.85■■■■□ 3.81
CDCA4P2-201ENST00000441182 TOPBP1Q92547 1522 aa38.55■■■■□ 3.76
CDCA4P2-201ENST00000441182 IFT140Q96RY7 1462 aa38.49■■■■□ 3.75
CDCA4P2-201ENST00000441182 OSCARQ8IYS5 282 aa38.46■■■■□ 3.75
CDCA4P2-201ENST00000441182 ZNF608Q9ULD9 1512 aaPredicted RBP38.46■■■■□ 3.75
CDCA4P2-201ENST00000441182 ABCC8Q09428 1581 aa38.44■■■■□ 3.74
CDCA4P2-201ENST00000441182 DNMBPQ6XZF7 1577 aa38.4■■■■□ 3.74
CDCA4P2-201ENST00000441182 TRIM41Q8WV44 630 aa38.34■■■■□ 3.73
CDCA4P2-201ENST00000441182 TARBP1Q13395 1621 aaKnown RBP38.2■■■■□ 3.71
CDCA4P2-201ENST00000441182 EIF4G3O43432 1585 aaKnown RBP38.19■■■■□ 3.7
CDCA4P2-201ENST00000441182 POLA1P09884 1462 aaPredicted RBP38.18■■■■□ 3.7
CDCA4P2-201ENST00000441182 AQRO60306 1485 aaKnown RBP eCLIP38.14■■■■□ 3.7
CDCA4P2-201ENST00000441182 RAD54L2Q9Y4B4 1467 aa38.06■■■■□ 3.68
CDCA4P2-201ENST00000441182 SUPT5HO00267 1087 aaKnown RBP38.01■■■■□ 3.68
CDCA4P2-201ENST00000441182 SOGA1O94964 1423 aa38■■■■□ 3.67
CDCA4P2-201ENST00000441182 CUX1P39880 1505 aa37.97■■■■□ 3.67
CDCA4P2-201ENST00000441182 FGD5Q6ZNL6 1462 aa37.95■■■■□ 3.67
CDCA4P2-201ENST00000441182 TDRD9Q8NDG6 1382 aaKnown RBP37.93■■■■□ 3.66
CDCA4P2-201ENST00000441182 RIMBP3CA6NJZ7 1639 aa37.92■■■■□ 3.66
CDCA4P2-201ENST00000441182 RIMBP3BA6NNM3 1639 aa37.92■■■■□ 3.66
CDCA4P2-201ENST00000441182 RIMBP3Q9UFD9 1639 aa37.92■■■■□ 3.66
CDCA4P2-201ENST00000441182 CHD1O14646 1710 aa37.86■■■■□ 3.65
CDCA4P2-201ENST00000441182 ARHGEF11O15085 1522 aa37.83■■■■□ 3.65
CDCA4P2-201ENST00000441182 FBLN2P98095 1184 aa37.79■■■■□ 3.64
CDCA4P2-201ENST00000441182 WDR97A6NE52 1622 aa37.77■■■■□ 3.64
CDCA4P2-201ENST00000441182 SNAPC4Q5SXM2 1469 aa37.71■■■■□ 3.63
CDCA4P2-201ENST00000441182 GRIN2BQ13224 1484 aa37.64■■■■□ 3.62
CDCA4P2-201ENST00000441182 MAGI1Q96QZ7 1491 aaPredicted RBP37.61■■■■□ 3.61
CDCA4P2-201ENST00000441182 CYB5RLQ6IPT4 315 aa37.56■■■■□ 3.6
CDCA4P2-201ENST00000441182 CHMP7Q8WUX9 453 aaPredicted RBP37.56■■■■□ 3.6
CDCA4P2-201ENST00000441182 ABCA10Q8WWZ4 1543 aa37.55■■■■□ 3.6
CDCA4P2-201ENST00000441182 GAPVD1Q14C86 1478 aa37.53■■■■□ 3.6
CDCA4P2-201ENST00000441182 ARAP1Q96P48 1450 aa37.5■■■■□ 3.59
CDCA4P2-201ENST00000441182 SYNJ2O15056 1496 aa37.49■■■■□ 3.59
CDCA4P2-201ENST00000441182 CLASP1Q7Z460 1538 aa37.48■■■■□ 3.59
CDCA4P2-201ENST00000441182 PBRM1Q86U86 1689 aa37.45■■■■□ 3.59
CDCA4P2-201ENST00000441182 ABCA5Q8WWZ7 1642 aa37.45■■■■□ 3.59
CDCA4P2-201ENST00000441182 SYNJ1O43426 1573 aa37.42■■■■□ 3.58
CDCA4P2-201ENST00000441182 WRNQ14191 1432 aaPredicted RBP eCLIP37.41■■■■□ 3.58
CDCA4P2-201ENST00000441182 TOP2BQ02880 1626 aa37.38■■■■□ 3.57
CDCA4P2-201ENST00000441182 BIVM-ERCC5R4GMW8 1640 aa37.36■■■■□ 3.57
CDCA4P2-201ENST00000441182 GRIN2AQ12879 1464 aa37.15■■■■□ 3.54
CDCA4P2-201ENST00000441182 ADAMTS12P58397 1594 aa37.14■■■■□ 3.54
CDCA4P2-201ENST00000441182 FHAD1B1AJZ9 1412 aa37.07■■■■□ 3.52
CDCA4P2-201ENST00000441182 NUP160Q12769 1436 aa37.06■■■■□ 3.52
CDCA4P2-201ENST00000441182 ERICH3Q5RHP9 1530 aa37.05■■■■□ 3.52
CDCA4P2-201ENST00000441182 TRHP20396 242 aaPredicted RBP37.03■■■■□ 3.52
CDCA4P2-201ENST00000441182 CEP170Q5SW79 1584 aa37.03■■■■□ 3.52
CDCA4P2-201ENST00000441182 ERCC6L2Q5T890 1561 aa36.95■■■■□ 3.51
CDCA4P2-201ENST00000441182 SHROOM2Q13796 1616 aa36.85■■■■□ 3.49
CDCA4P2-201ENST00000441182 IGF1RP08069 1367 aa36.69■■■■□ 3.46
CDCA4P2-201ENST00000441182 JPH4Q96JJ6 628 aa36.69■■■■□ 3.46
CDCA4P2-201ENST00000441182 PRG4Q92954 1404 aaPredicted RBP36.67■■■■□ 3.46
CDCA4P2-201ENST00000441182 KIF27Q86VH2 1401 aa36.65■■■■□ 3.46
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms