Protein–RNA interactions for Protein: P35269

GTF2F1, General transcription factor IIF subunit 1, humanhuman

Known RBP eCLIP

Length 517 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1P35269 ST3GAL3-226ENST00000490502 592 ntTSL 315.18■□□□□ 0.026e-9■□□□□ 10.1
GTF2F1P35269 RBM12-204ENST00000424458 1068 ntTSL 227.55■■■□□ 22e-12■□□□□ 10
GTF2F1P35269 CPNE1-223ENST00000475146 627 ntTSL 326.48■■□□□ 1.832e-12■□□□□ 10
GTF2F1P35269 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC18.83■□□□□ 0.62e-12■□□□□ 10
GTF2F1P35269 CPNE1-208ENST00000414711 673 ntTSL 518.76■□□□□ 0.592e-12■□□□□ 10
GTF2F1P35269 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.472e-12■□□□□ 10
GTF2F1P35269 CPNE1-215ENST00000437100 826 ntTSL 515.81■□□□□ 0.122e-12■□□□□ 10
GTF2F1P35269 RBM12-202ENST00000374104 5213 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.122e-12■□□□□ 10
GTF2F1P35269 RBM12-206ENST00000435161 565 ntTSL 412.51□□□□□ -0.412e-12■□□□□ 10
GTF2F1P35269 CPNE1-214ENST00000435747 400 ntTSL 312.36□□□□□ -0.432e-12■□□□□ 10
GTF2F1P35269 RBM12-205ENST00000431148 583 ntTSL 412.24□□□□□ -0.452e-12■□□□□ 10
GTF2F1P35269 AL109827.1-202ENST00000441563 611 ntAPPRIS ALT2 TSL 210.93□□□□□ -0.662e-12■□□□□ 10
GTF2F1P35269 AL109827.1-201ENST00000454607 679 ntAPPRIS ALT2 TSL 210.93□□□□□ -0.662e-12■□□□□ 10
GTF2F1P35269 RBM12-203ENST00000374114 6662 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.712e-12■□□□□ 10
GTF2F1P35269 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.63e-7■□□□□ 10
GTF2F1P35269 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.533e-7■□□□□ 10
GTF2F1P35269 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC29.09■■■□□ 2.252e-6■□□□□ 10
GTF2F1P35269 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.612e-6■□□□□ 10
GTF2F1P35269 F2-202ENST00000442468 1031 ntTSL 323.35■■□□□ 1.332e-6■□□□□ 10
GTF2F1P35269 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC22.58■■□□□ 1.212e-6■□□□□ 10
GTF2F1P35269 DGKD-204ENST00000430834 5379 ntTSL 1 (best)16.75■□□□□ 0.272e-6■□□□□ 10
GTF2F1P35269 HIST1H2BN-202ENST00000449538 715 ntTSL 1 (best)19.15■□□□□ 0.662e-6■□□□□ 10
GTF2F1P35269 HIST1H2BN-201ENST00000396980 432 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.222e-6■□□□□ 10
GTF2F1P35269 HIST1H2BN-203ENST00000606613 4137 ntTSL 1 (best) BASIC9.74□□□□□ -0.852e-6■□□□□ 10
GTF2F1P35269 FTX-216ENST00000638985 1367 ntTSL 5 BASIC15.29■□□□□ 0.041e-7■□□□□ 10
GTF2F1P35269 FTX-209ENST00000602812 2356 ntTSL 1 (best)12.29□□□□□ -0.441e-7■□□□□ 10
GTF2F1P35269 FTX-215ENST00000638681 9771 ntTSL 5 BASIC11.41□□□□□ -0.581e-7■□□□□ 10
GTF2F1P35269 FTX-206ENST00000602420 751 ntTSL 36.39□□□□□ -1.391e-7■□□□□ 10
GTF2F1P35269 FTX-210ENST00000603037 8347 ntTSL 5 BASIC5.43□□□□□ -1.541e-7■□□□□ 10
GTF2F1P35269 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC27.33■■□□□ 1.976e-6■□□□□ 10
GTF2F1P35269 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC24.08■■□□□ 1.446e-6■□□□□ 10
GTF2F1P35269 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC22.43■■□□□ 1.186e-6■□□□□ 10
GTF2F1P35269 SPIRE2-206ENST00000564878 663 ntTSL 320.04■□□□□ 0.86e-6■□□□□ 10
GTF2F1P35269 FGFR3-206ENST00000469068 821 ntTSL 317.62■□□□□ 0.416e-8■□□□□ 10
GTF2F1P35269 AC016205.1-201ENST00000591629 2306 ntTSL 2 BASIC9.86□□□□□ -0.835e-8■□□□□ 10
GTF2F1P35269 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC24.46■■□□□ 1.514e-9■□□□□ 10
GTF2F1P35269 LYRM1-208ENST00000567954 460 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.944e-9■□□□□ 10
GTF2F1P35269 MFGE8-214ENST00000560937 801 ntTSL 219.27■□□□□ 0.683e-7■□□□□ 10
GTF2F1P35269 TOX3-205ENST00000568436 548 ntTSL 322.29■■□□□ 1.162e-6■□□□□ 9.9
GTF2F1P35269 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.062e-6■□□□□ 9.9
GTF2F1P35269 GDF15-203ENST00000595973 890 ntTSL 521.21■□□□□ 0.992e-6■□□□□ 9.9
GTF2F1P35269 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.32e-6■□□□□ 9.9
GTF2F1P35269 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.292e-6■□□□□ 9.9
GTF2F1P35269 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC16.81■□□□□ 0.282e-6■□□□□ 9.9
GTF2F1P35269 SLC2A1-209ENST00000630821 591 ntTSL 216.33■□□□□ 0.25e-6■□□□□ 9.9
GTF2F1P35269 AC215219.1-201ENST00000400706 1817 ntBASIC15.99■□□□□ 0.152e-6■□□□□ 9.9
GTF2F1P35269 TGFBR3-201ENST00000212355 6465 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.122e-6■□□□□ 9.9
GTF2F1P35269 AC092139.4-201ENST00000624318 2794 ntBASIC15.64■□□□□ 0.092e-6■□□□□ 9.9
GTF2F1P35269 ITPR2-201ENST00000242737 581 ntTSL 1 (best) BASIC11.89□□□□□ -0.512e-6■□□□□ 9.9
GTF2F1P35269 MGAT5-201ENST00000281923 8144 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.762e-6■□□□□ 9.9
GTF2F1P35269 ITPR2-209ENST00000545235 540 ntTSL 1 (best)9.73□□□□□ -0.852e-6■□□□□ 9.9
GTF2F1P35269 TOX3-203ENST00000563091 572 ntTSL 49.16□□□□□ -0.942e-6■□□□□ 9.9
GTF2F1P35269 TGFBR3-210ENST00000533089 6455 ntTSL 1 (best)8.41□□□□□ -1.062e-6■□□□□ 9.9
GTF2F1P35269 TGFBR3-207ENST00000525962 3927 ntAPPRIS P3 TSL 1 (best) BASIC8.19□□□□□ -1.12e-6■□□□□ 9.9
GTF2F1P35269 TGFBR3-209ENST00000532540 3913 ntTSL 1 (best)8.12□□□□□ -1.112e-6■□□□□ 9.9
GTF2F1P35269 TGFBR3-202ENST00000370399 4550 ntAPPRIS ALT1 TSL 1 (best) BASIC7.81□□□□□ -1.162e-6■□□□□ 9.9
GTF2F1P35269 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC7.45□□□□□ -1.222e-6■□□□□ 9.9
GTF2F1P35269 FAM83H-202ENST00000395103 3611 ntTSL 218.65■□□□□ 0.581e-6■□□□□ 9.9
GTF2F1P35269 COLGALT1-202ENST00000593832 2941 ntTSL 217.15■□□□□ 0.341e-6■□□□□ 9.9
GTF2F1P35269 HLF-204ENST00000572002 1251 ntTSL 313.77□□□□□ -0.219e-8■□□□□ 9.9
GTF2F1P35269 HLF-203ENST00000570962 1310 ntTSL 212.97□□□□□ -0.339e-8■□□□□ 9.9
GTF2F1P35269 HLF-208ENST00000573945 2977 ntTSL 5 BASIC10.71□□□□□ -0.699e-8■□□□□ 9.9
GTF2F1P35269 HLF-210ENST00000575345 3589 ntTSL 2 BASIC9.16□□□□□ -0.949e-8■□□□□ 9.9
GTF2F1P35269 U2AF2-205ENST00000588850 637 ntTSL 216.68■□□□□ 0.264e-9■□□□□ 9.9
GTF2F1P35269 NIPA1-203ENST00000557930 582 ntTSL 214.5□□□□□ -0.092e-7■□□□□ 9.9
GTF2F1P35269 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.95□□□□□ -1.783e-8■□□□□ 9.9
GTF2F1P35269 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC21.7■■□□□ 1.071e-8■□□□□ 9.9
GTF2F1P35269 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC18.68■□□□□ 0.581e-8■□□□□ 9.9
GTF2F1P35269 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.351e-8■□□□□ 9.9
GTF2F1P35269 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC20.3■□□□□ 0.842e-7■□□□□ 9.9
GTF2F1P35269 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.822e-7■□□□□ 9.9
GTF2F1P35269 ETV4-210ENST00000590236 616 ntTSL 317.97■□□□□ 0.472e-7■□□□□ 9.9
GTF2F1P35269 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC16.94■□□□□ 0.32e-7■□□□□ 9.9
GTF2F1P35269 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.142e-7■□□□□ 9.9
GTF2F1P35269 GALNT7-201ENST00000265000 4307 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.181e-7■□□□□ 9.8
GTF2F1P35269 GALNT7-206ENST00000512285 1567 ntTSL 5 BASIC10.73□□□□□ -0.691e-7■□□□□ 9.8
GTF2F1P35269 ARFGEF1-206ENST00000519436 571 ntTSL 323.73■■□□□ 1.396e-6■□□□□ 9.8
GTF2F1P35269 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC21.22■□□□□ 0.991e-6■□□□□ 9.8
GTF2F1P35269 TP73-AS1-210ENST00000637775 1455 ntBASIC19.33■□□□□ 0.681e-6■□□□□ 9.8
GTF2F1P35269 TP73-AS1-209ENST00000636630 2529 ntTSL 518.59■□□□□ 0.571e-6■□□□□ 9.8
GTF2F1P35269 TP73-AS1-204ENST00000452079 6358 ntTSL 1 (best)16.79■□□□□ 0.281e-6■□□□□ 9.8
GTF2F1P35269 ARFGEF1-201ENST00000262215 7225 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.086e-6■□□□□ 9.8
GTF2F1P35269 TP73-AS1-205ENST00000587071 737 ntTSL 413.71□□□□□ -0.211e-6■□□□□ 9.8
GTF2F1P35269 TP73-AS1-201ENST00000418088 3329 ntTSL 1 (best)13.7□□□□□ -0.221e-6■□□□□ 9.8
GTF2F1P35269 TP73-AS1-206ENST00000608600 597 ntTSL 513□□□□□ -0.331e-6■□□□□ 9.8
GTF2F1P35269 UBA1-206ENST00000442035 1054 ntTSL 523.54■■□□□ 1.362e-6■□□□□ 9.8
GTF2F1P35269 UBA1-208ENST00000457753 809 ntTSL 519.47■□□□□ 0.712e-6■□□□□ 9.8
GTF2F1P35269 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.332e-6■□□□□ 9.8
GTF2F1P35269 UBA1-204ENST00000412206 1148 ntTSL 515.67■□□□□ 0.12e-6■□□□□ 9.8
GTF2F1P35269 UBA1-205ENST00000427561 671 ntTSL 515.59■□□□□ 0.092e-6■□□□□ 9.8
GTF2F1P35269 UBA1-203ENST00000377351 3466 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.562e-6■□□□□ 9.8
GTF2F1P35269 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC19.62■□□□□ 0.735e-6■□□□□ 9.8
GTF2F1P35269 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.215e-6■□□□□ 9.8
GTF2F1P35269 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC20.36■□□□□ 0.851e-6■□□□□ 9.8
GTF2F1P35269 PTTG1IP-205ENST00000474737 580 ntTSL 317.89■□□□□ 0.454e-7■□□□□ 9.8
GTF2F1P35269 PTTG1IP-202ENST00000397886 755 ntTSL 4 BASIC15.21■□□□□ 0.034e-7■□□□□ 9.8
GTF2F1P35269 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC22.92■■□□□ 1.261e-7■□□□□ 9.8
GTF2F1P35269 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.831e-7■□□□□ 9.8
GTF2F1P35269 SEMA3B-211ENST00000612509 1061 ntTSL 519.8■□□□□ 0.761e-7■□□□□ 9.8
GTF2F1P35269 SEMA3B-207ENST00000441915 2710 ntTSL 1 (best)19.44■□□□□ 0.71e-7■□□□□ 9.8
Retrieved 100 of 18,214 protein–RNA pairs in 189.8 ms