RNA–Protein interactions for RNA: ENST00000412206.5

UBA1-204, Transcript of ubiquitin like modifier activating enzyme 1, humanhuman

TSL 5

Gene UBA1, Length 1,148 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA1-204ENST00000412206 NISCHQ9Y2I1 1504 aa34.7■■■■□ 3.14
UBA1-204ENST00000412206 CCDC180Q9P1Z9 1646 aa30.74■■■□□ 2.51
UBA1-204ENST00000412206 ABCC9O60706 1549 aa30.54■■■□□ 2.48
UBA1-204ENST00000412206 DCAF8L2P0C7V8 631 aa29.2■■■□□ 2.26
UBA1-204ENST00000412206 RB1CC1Q8TDY2 1594 aa29.06■■■□□ 2.24
UBA1-204ENST00000412206 NACADO15069 1562 aa29.03■■■□□ 2.24
UBA1-204ENST00000412206 MYO15BQ96JP2 1530 aa28.89■■■□□ 2.21
UBA1-204ENST00000412206 ZCCHC6Q5VYS8 1495 aaKnown RBP28.83■■■□□ 2.21
UBA1-204ENST00000412206 DCAF1Q9Y4B6 1507 aa28.74■■■□□ 2.19
UBA1-204ENST00000412206 UNC13AQ9UPW8 1703 aa28.6■■■□□ 2.17
UBA1-204ENST00000412206 DNAJC5BQ9UF47 199 aa28.56■■■□□ 2.16
UBA1-204ENST00000412206 PABPN1Q86U42 306 aaKnown RBP eCLIP28.44■■■□□ 2.144e-10■□□□□ 11.2
UBA1-204ENST00000412206 BICRAQ9NZM4 1560 aa28.3■■■□□ 2.12
UBA1-204ENST00000412206 SCRIBQ14160 1630 aa28.02■■■□□ 2.08
UBA1-204ENST00000412206 SHROOM4Q9ULL8 1493 aa27.88■■■□□ 2.05
UBA1-204ENST00000412206 CC2D2AQ9P2K1 1620 aa27.61■■■□□ 2.01
UBA1-204ENST00000412206 EIF4G1Q04637 1599 aaKnown RBP27.55■■■□□ 2
UBA1-204ENST00000412206 CECR2Q9BXF3 1484 aa27.45■■□□□ 1.99
UBA1-204ENST00000412206 BAZ1AQ9NRL2 1556 aaPredicted RBP26.88■■□□□ 1.89
UBA1-204ENST00000412206 SMARCA4P51532 1647 aa26.84■■□□□ 1.89
UBA1-204ENST00000412206 NCAPD3P42695 1498 aa26.84■■□□□ 1.89
UBA1-204ENST00000412206 ATAD2BQ9ULI0 1458 aa26.8■■□□□ 1.88
UBA1-204ENST00000412206 SMARCA2P51531 1590 aa26.76■■□□□ 1.87
UBA1-204ENST00000412206 MROH2BQ7Z745 1585 aa26.69■■□□□ 1.86
UBA1-204ENST00000412206 PEG3Q9GZU2 1588 aa26.63■■□□□ 1.85
UBA1-204ENST00000412206 HMGXB3Q12766 1538 aa26.59■■□□□ 1.85
UBA1-204ENST00000412206 BAZ1BQ9UIG0 1483 aaKnown RBP26.55■■□□□ 1.84
UBA1-204ENST00000412206 RSF1Q96T23 1441 aaPredicted RBP26.48■■□□□ 1.83
UBA1-204ENST00000412206 WIZO95785 1651 aa26.35■■□□□ 1.81
UBA1-204ENST00000412206 NESP48681 1621 aa26.31■■□□□ 1.8
UBA1-204ENST00000412206 ERCC6Q03468 1493 aa26.3■■□□□ 1.8
UBA1-204ENST00000412206 CUX2O14529 1486 aa26.17■■□□□ 1.78
UBA1-204ENST00000412206 TOP2AP11388 1531 aaKnown RBP26.11■■□□□ 1.77
UBA1-204ENST00000412206 CADPSQ9ULU8 1353 aa26.08■■□□□ 1.77
UBA1-204ENST00000412206 LAMC3Q9Y6N6 1575 aa26.05■■□□□ 1.76
UBA1-204ENST00000412206 DNAJC5Q9H3Z4 198 aa26.04■■□□□ 1.76
UBA1-204ENST00000412206 KIF21AQ7Z4S6 1674 aa26.03■■□□□ 1.76
UBA1-204ENST00000412206 THOC2Q8NI27 1593 aaKnown RBP26■■□□□ 1.75
UBA1-204ENST00000412206 PDS5BQ9NTI5 1447 aa26■■□□□ 1.75
UBA1-204ENST00000412206 SUPT5HO00267 1087 aaKnown RBP25.9■■□□□ 1.74
UBA1-204ENST00000412206 CCDC88BA6NC98 1476 aa25.9■■□□□ 1.74
UBA1-204ENST00000412206 CFTRP13569 1480 aa25.86■■□□□ 1.73
UBA1-204ENST00000412206 FANCD2Q9BXW9 1451 aa25.7■■□□□ 1.7
UBA1-204ENST00000412206 MRC2Q9UBG0 1479 aa25.66■■□□□ 1.7
UBA1-204ENST00000412206 CEP164Q9UPV0 1460 aa25.65■■□□□ 1.7
UBA1-204ENST00000412206 WDR62O43379 1518 aa25.62■■□□□ 1.69
UBA1-204ENST00000412206 PRDM2Q13029 1718 aa25.47■■□□□ 1.67
UBA1-204ENST00000412206 URB2Q14146 1524 aaKnown RBP25.41■■□□□ 1.66
UBA1-204ENST00000412206 ABCC8Q09428 1581 aa25.39■■□□□ 1.66
UBA1-204ENST00000412206 TOPBP1Q92547 1522 aa25.26■■□□□ 1.63
UBA1-204ENST00000412206 DNMBPQ6XZF7 1577 aa25.2■■□□□ 1.62
UBA1-204ENST00000412206 IFT140Q96RY7 1462 aa25.15■■□□□ 1.62
UBA1-204ENST00000412206 ZNF608Q9ULD9 1512 aaPredicted RBP25.09■■□□□ 1.61
UBA1-204ENST00000412206 SOGA1O94964 1423 aa25.06■■□□□ 1.6
UBA1-204ENST00000412206 POLA1P09884 1462 aaPredicted RBP25.03■■□□□ 1.6
UBA1-204ENST00000412206 CUX1P39880 1505 aa25.03■■□□□ 1.6
UBA1-204ENST00000412206 TRIM41Q8WV44 630 aa25.01■■□□□ 1.59
UBA1-204ENST00000412206 OSCARQ8IYS5 282 aa24.98■■□□□ 1.59
UBA1-204ENST00000412206 EIF4G3O43432 1585 aaKnown RBP24.97■■□□□ 1.59
UBA1-204ENST00000412206 FGD5Q6ZNL6 1462 aa24.96■■□□□ 1.59
UBA1-204ENST00000412206 WRNQ14191 1432 aaPredicted RBP eCLIP24.96■■□□□ 1.594e-7■■■□□ 16.7
UBA1-204ENST00000412206 RAD54L2Q9Y4B4 1467 aa24.95■■□□□ 1.58
UBA1-204ENST00000412206 TARBP1Q13395 1621 aaKnown RBP24.94■■□□□ 1.58
UBA1-204ENST00000412206 AQRO60306 1485 aaKnown RBP eCLIP24.9■■□□□ 1.582e-7■■■□□ 14.8
UBA1-204ENST00000412206 TDRD9Q8NDG6 1382 aaKnown RBP24.89■■□□□ 1.57
UBA1-204ENST00000412206 TOP2BQ02880 1626 aa24.83■■□□□ 1.56
UBA1-204ENST00000412206 CHD1O14646 1710 aa24.82■■□□□ 1.56
UBA1-204ENST00000412206 WDR97A6NE52 1622 aa24.79■■□□□ 1.56
UBA1-204ENST00000412206 RIMBP3CA6NJZ7 1639 aa24.79■■□□□ 1.56
UBA1-204ENST00000412206 RIMBP3BA6NNM3 1639 aa24.79■■□□□ 1.56
UBA1-204ENST00000412206 RIMBP3Q9UFD9 1639 aa24.79■■□□□ 1.56
UBA1-204ENST00000412206 BIVM-ERCC5R4GMW8 1640 aa24.77■■□□□ 1.56
UBA1-204ENST00000412206 ABCA10Q8WWZ4 1543 aa24.76■■□□□ 1.55
UBA1-204ENST00000412206 SYNJ1O43426 1573 aa24.76■■□□□ 1.55
UBA1-204ENST00000412206 FBLN2P98095 1184 aa24.72■■□□□ 1.55
UBA1-204ENST00000412206 GRIN2BQ13224 1484 aa24.71■■□□□ 1.55
UBA1-204ENST00000412206 GAPVD1Q14C86 1478 aa24.71■■□□□ 1.55
UBA1-204ENST00000412206 CHMP7Q8WUX9 453 aaPredicted RBP24.69■■□□□ 1.54
UBA1-204ENST00000412206 ARHGEF11O15085 1522 aa24.67■■□□□ 1.54
UBA1-204ENST00000412206 MAGI1Q96QZ7 1491 aaPredicted RBP24.63■■□□□ 1.53
UBA1-204ENST00000412206 SNAPC4Q5SXM2 1469 aa24.6■■□□□ 1.53
UBA1-204ENST00000412206 ABCA5Q8WWZ7 1642 aa24.55■■□□□ 1.52
UBA1-204ENST00000412206 PBRM1Q86U86 1689 aa24.54■■□□□ 1.52
UBA1-204ENST00000412206 SYNJ2O15056 1496 aa24.53■■□□□ 1.52
UBA1-204ENST00000412206 KIF27Q86VH2 1401 aa24.49■■□□□ 1.51
UBA1-204ENST00000412206 ERICH3Q5RHP9 1530 aa24.47■■□□□ 1.51
UBA1-204ENST00000412206 FHAD1B1AJZ9 1412 aa24.45■■□□□ 1.51
UBA1-204ENST00000412206 CYB5RLQ6IPT4 315 aa24.45■■□□□ 1.5
UBA1-204ENST00000412206 CLASP1Q7Z460 1538 aa24.45■■□□□ 1.5
UBA1-204ENST00000412206 ARAP1Q96P48 1450 aa24.45■■□□□ 1.5
UBA1-204ENST00000412206 IGF1RP08069 1367 aa24.43■■□□□ 1.5
UBA1-204ENST00000412206 GRIN2AQ12879 1464 aa24.34■■□□□ 1.49
UBA1-204ENST00000412206 ADAMTS12P58397 1594 aa24.31■■□□□ 1.48
UBA1-204ENST00000412206 CARMIL1Q5VZK9 1371 aa24.28■■□□□ 1.48
UBA1-204ENST00000412206 NUP160Q12769 1436 aa24.25■■□□□ 1.47
UBA1-204ENST00000412206 CHIC1Q5VXU3 224 aa24.19■■□□□ 1.46
UBA1-204ENST00000412206 JPH4Q96JJ6 628 aa24.19■■□□□ 1.46
UBA1-204ENST00000412206 CUL7Q14999 1698 aa24.18■■□□□ 1.46
UBA1-204ENST00000412206 CEP170Q5SW79 1584 aa24.18■■□□□ 1.46
UBA1-204ENST00000412206 RUSC2Q8N2Y8 1516 aa24.15■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms