RNA–Protein interactions for RNA: ENST00000369109.7

APH1A-203, Transcript of aph-1 homolog A, gamma-secretase subunit, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene APH1A, Length 1,713 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APH1A-203ENST00000369109 NISCHQ9Y2I1 1504 aa37.63■■■■□ 3.62
APH1A-203ENST00000369109 CCDC180Q9P1Z9 1646 aa32.92■■■□□ 2.86
APH1A-203ENST00000369109 ZCCHC6Q5VYS8 1495 aaKnown RBP31.56■■■□□ 2.64
APH1A-203ENST00000369109 ABCC9O60706 1549 aa31.25■■■□□ 2.59
APH1A-203ENST00000369109 DCAF1Q9Y4B6 1507 aa31.19■■■□□ 2.58
APH1A-203ENST00000369109 DCAF8L2P0C7V8 631 aa31.04■■■□□ 2.56
APH1A-203ENST00000369109 MYO15BQ96JP2 1530 aa30.94■■■□□ 2.54
APH1A-203ENST00000369109 NACADO15069 1562 aa30.74■■■□□ 2.51
APH1A-203ENST00000369109 RB1CC1Q8TDY2 1594 aa30.5■■■□□ 2.47
APH1A-203ENST00000369109 SHROOM4Q9ULL8 1493 aa30.37■■■□□ 2.45
APH1A-203ENST00000369109 SCRIBQ14160 1630 aa30.13■■■□□ 2.41
APH1A-203ENST00000369109 UNC13AQ9UPW8 1703 aa29.78■■■□□ 2.36
APH1A-203ENST00000369109 BICRAQ9NZM4 1560 aa29.57■■■□□ 2.32
APH1A-203ENST00000369109 PABPN1Q86U42 306 aaKnown RBP eCLIP29.42■■■□□ 2.3
APH1A-203ENST00000369109 CECR2Q9BXF3 1484 aa29.21■■■□□ 2.27
APH1A-203ENST00000369109 SUPT5HO00267 1087 aaKnown RBP29.16■■■□□ 2.26
APH1A-203ENST00000369109 RSF1Q96T23 1441 aaPredicted RBP29.1■■■□□ 2.25
APH1A-203ENST00000369109 BAZ1AQ9NRL2 1556 aaPredicted RBP29.07■■■□□ 2.24
APH1A-203ENST00000369109 MROH2BQ7Z745 1585 aa29.02■■■□□ 2.24
APH1A-203ENST00000369109 SMARCA4P51532 1647 aa28.94■■■□□ 2.22
APH1A-203ENST00000369109 WIZO95785 1651 aa28.73■■■□□ 2.19
APH1A-203ENST00000369109 EIF4G1Q04637 1599 aaKnown RBP28.69■■■□□ 2.18
APH1A-203ENST00000369109 PEG3Q9GZU2 1588 aa28.67■■■□□ 2.18
APH1A-203ENST00000369109 ATAD2BQ9ULI0 1458 aa28.56■■■□□ 2.16
APH1A-203ENST00000369109 SMARCA2P51531 1590 aa28.54■■■□□ 2.16
APH1A-203ENST00000369109 TOP2AP11388 1531 aaKnown RBP28.49■■■□□ 2.15
APH1A-203ENST00000369109 NCAPD3P42695 1498 aa28.4■■■□□ 2.14
APH1A-203ENST00000369109 BAZ1BQ9UIG0 1483 aaKnown RBP28.35■■■□□ 2.13
APH1A-203ENST00000369109 HMGXB3Q12766 1538 aa28.31■■■□□ 2.12
APH1A-203ENST00000369109 CC2D2AQ9P2K1 1620 aa28.3■■■□□ 2.12
APH1A-203ENST00000369109 CCDC88BA6NC98 1476 aa28.19■■■□□ 2.1
APH1A-203ENST00000369109 CHIC1Q5VXU3 224 aa27.87■■■□□ 2.05
APH1A-203ENST00000369109 DNAJC5BQ9UF47 199 aa27.8■■■□□ 2.04
APH1A-203ENST00000369109 CFTRP13569 1480 aa27.68■■■□□ 2.02
APH1A-203ENST00000369109 CADPSQ9ULU8 1353 aa27.63■■■□□ 2.01
APH1A-203ENST00000369109 TRIM41Q8WV44 630 aa27.5■■□□□ 1.99
APH1A-203ENST00000369109 ABCC8Q09428 1581 aa27.45■■□□□ 1.98
APH1A-203ENST00000369109 PRDM2Q13029 1718 aa27.44■■□□□ 1.98
APH1A-203ENST00000369109 LAMC3Q9Y6N6 1575 aa27.43■■□□□ 1.98
APH1A-203ENST00000369109 WRNQ14191 1432 aaPredicted RBP eCLIP27.39■■□□□ 1.97
APH1A-203ENST00000369109 NESP48681 1621 aa27.37■■□□□ 1.97
APH1A-203ENST00000369109 FANCD2Q9BXW9 1451 aa27.28■■□□□ 1.96
APH1A-203ENST00000369109 PDS5BQ9NTI5 1447 aa27.24■■□□□ 1.95
APH1A-203ENST00000369109 SYNJ1O43426 1573 aa27.23■■□□□ 1.95
APH1A-203ENST00000369109 TOP2BQ02880 1626 aa27.19■■□□□ 1.94
APH1A-203ENST00000369109 BIVM-ERCC5R4GMW8 1640 aa27.15■■□□□ 1.94
APH1A-203ENST00000369109 CUX1P39880 1505 aa27.15■■□□□ 1.94
APH1A-203ENST00000369109 CEP164Q9UPV0 1460 aa27.13■■□□□ 1.93
APH1A-203ENST00000369109 KIF21AQ7Z4S6 1674 aa27.01■■□□□ 1.91
APH1A-203ENST00000369109 DNMBPQ6XZF7 1577 aa27■■□□□ 1.91
APH1A-203ENST00000369109 TOPBP1Q92547 1522 aa26.96■■□□□ 1.91
APH1A-203ENST00000369109 URB2Q14146 1524 aaKnown RBP26.94■■□□□ 1.9
APH1A-203ENST00000369109 SOGA1O94964 1423 aa26.93■■□□□ 1.9
APH1A-203ENST00000369109 EEA1Q15075 1411 aa26.93■■□□□ 1.9
APH1A-203ENST00000369109 FAM9AQ8IZU1 332 aaPredicted RBP26.89■■□□□ 1.9
APH1A-203ENST00000369109 FGD5Q6ZNL6 1462 aa26.89■■□□□ 1.89
APH1A-203ENST00000369109 MRC2Q9UBG0 1479 aa26.87■■□□□ 1.89
APH1A-203ENST00000369109 ERCC6Q03468 1493 aa26.83■■□□□ 1.89
APH1A-203ENST00000369109 RUSC2Q8N2Y8 1516 aa26.83■■□□□ 1.88
APH1A-203ENST00000369109 POLA1P09884 1462 aaPredicted RBP26.82■■□□□ 1.88
APH1A-203ENST00000369109 CSRNP3Q8WYN3 585 aa26.77■■□□□ 1.88
APH1A-203ENST00000369109 WDR62O43379 1518 aa26.75■■□□□ 1.87
APH1A-203ENST00000369109 KIF27Q86VH2 1401 aa26.73■■□□□ 1.87
APH1A-203ENST00000369109 LOC105371045A0A1W2PR82 267 aa26.73■■□□□ 1.87
APH1A-203ENST00000369109 ABCA10Q8WWZ4 1543 aa26.7■■□□□ 1.86
APH1A-203ENST00000369109 RAD54L2Q9Y4B4 1467 aa26.69■■□□□ 1.86
APH1A-203ENST00000369109 THOC2Q8NI27 1593 aaKnown RBP26.68■■□□□ 1.86
APH1A-203ENST00000369109 CUX2O14529 1486 aa26.67■■□□□ 1.86
APH1A-203ENST00000369109 TARBP1Q13395 1621 aaKnown RBP26.57■■□□□ 1.84
APH1A-203ENST00000369109 WDR97A6NE52 1622 aa26.57■■□□□ 1.84
APH1A-203ENST00000369109 IFT140Q96RY7 1462 aa26.53■■□□□ 1.84
APH1A-203ENST00000369109 IGF1RP08069 1367 aa26.53■■□□□ 1.84
APH1A-203ENST00000369109 KIF21BO75037 1637 aa26.53■■□□□ 1.84
APH1A-203ENST00000369109 PRXQ9BXM0 1461 aa26.51■■□□□ 1.83
APH1A-203ENST00000369109 GOLGA3Q08378 1498 aa26.48■■□□□ 1.83
APH1A-203ENST00000369109 TDRD9Q8NDG6 1382 aaKnown RBP26.46■■□□□ 1.83
APH1A-203ENST00000369109 ABCA5Q8WWZ7 1642 aa26.46■■□□□ 1.83
APH1A-203ENST00000369109 EHMT2Q96KQ7 1210 aa26.44■■□□□ 1.82
APH1A-203ENST00000369109 GAPVD1Q14C86 1478 aa26.43■■□□□ 1.82
APH1A-203ENST00000369109 ERICH3Q5RHP9 1530 aa26.42■■□□□ 1.82
APH1A-203ENST00000369109 TNIKQ9UKE5 1360 aa26.39■■□□□ 1.82
APH1A-203ENST00000369109 RAPGEF2Q9Y4G8 1499 aa26.39■■□□□ 1.82
APH1A-203ENST00000369109 CARMIL1Q5VZK9 1371 aa26.37■■□□□ 1.81
APH1A-203ENST00000369109 UBTFP17480 764 aaKnown RBP26.34■■□□□ 1.81
APH1A-203ENST00000369109 AQRO60306 1485 aaKnown RBP eCLIP26.34■■□□□ 1.81
APH1A-203ENST00000369109 ZNF608Q9ULD9 1512 aaPredicted RBP26.33■■□□□ 1.8
APH1A-203ENST00000369109 CUL7Q14999 1698 aa26.31■■□□□ 1.8
APH1A-203ENST00000369109 GRIN2BQ13224 1484 aa26.28■■□□□ 1.8
APH1A-203ENST00000369109 PBRM1Q86U86 1689 aa26.23■■□□□ 1.79
APH1A-203ENST00000369109 EIF4G3O43432 1585 aaKnown RBP26.23■■□□□ 1.79
APH1A-203ENST00000369109 CEP162Q5TB80 1403 aa26.18■■□□□ 1.78
APH1A-203ENST00000369109 FHAD1B1AJZ9 1412 aa26.17■■□□□ 1.78
APH1A-203ENST00000369109 ADAMTS12P58397 1594 aa26.12■■□□□ 1.77
APH1A-203ENST00000369109 MAGI1Q96QZ7 1491 aaPredicted RBP26.09■■□□□ 1.77
APH1A-203ENST00000369109 SNAPC4Q5SXM2 1469 aa26.08■■□□□ 1.77
APH1A-203ENST00000369109 CLIP1P30622 1438 aa26.04■■□□□ 1.76
APH1A-203ENST00000369109 SYNJ2O15056 1496 aa25.98■■□□□ 1.75
APH1A-203ENST00000369109 GRIN2AQ12879 1464 aa25.94■■□□□ 1.74
APH1A-203ENST00000369109 CTTNBP2Q8WZ74 1663 aa25.93■■□□□ 1.74
APH1A-203ENST00000369109 CHMP7Q8WUX9 453 aaPredicted RBP25.91■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms