RNA–Protein interactions for RNA: ENST00000557147.1

LINC01578-208, Transcript of long intergenic non-protein coding RNA 1578, humanhuman

TSL 3 BASIC

Gene LINC01578, Length 490 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01578-208ENST00000557147 NISCHQ9Y2I1 1504 aa50.07■■■■■ 5.61
LINC01578-208ENST00000557147 CCDC180Q9P1Z9 1646 aa44.75■■■■■ 4.75
LINC01578-208ENST00000557147 ABCC9O60706 1549 aa44.4■■■■■ 4.7
LINC01578-208ENST00000557147 RB1CC1Q8TDY2 1594 aa42.47■■■■■ 4.39
LINC01578-208ENST00000557147 NACADO15069 1562 aa42.31■■■■■ 4.36
LINC01578-208ENST00000557147 DCAF8L2P0C7V8 631 aa42.06■■■■■ 4.32
LINC01578-208ENST00000557147 MYO15BQ96JP2 1530 aa41.93■■■■■ 4.3
LINC01578-208ENST00000557147 ZCCHC6Q5VYS8 1495 aaKnown RBP41.56■■■■■ 4.24
LINC01578-208ENST00000557147 DCAF1Q9Y4B6 1507 aa41.47■■■■■ 4.23
LINC01578-208ENST00000557147 PABPN1Q86U42 306 aaKnown RBP eCLIP41.4■■■■■ 4.22
LINC01578-208ENST00000557147 DNAJC5BQ9UF47 199 aa41.38■■■■■ 4.21
LINC01578-208ENST00000557147 UNC13AQ9UPW8 1703 aa41.3■■■■■ 4.2
LINC01578-208ENST00000557147 BICRAQ9NZM4 1560 aa41.16■■■■■ 4.18
LINC01578-208ENST00000557147 SHROOM4Q9ULL8 1493 aa40.84■■■■■ 4.13
LINC01578-208ENST00000557147 SCRIBQ14160 1630 aa40.7■■■■■ 4.11
LINC01578-208ENST00000557147 EIF4G1Q04637 1599 aaKnown RBP40.14■■■■■ 4.02
LINC01578-208ENST00000557147 CC2D2AQ9P2K1 1620 aa40.12■■■■■ 4.01
LINC01578-208ENST00000557147 CECR2Q9BXF3 1484 aa40.01■■■■■ 4
LINC01578-208ENST00000557147 NCAPD3P42695 1498 aa39.1■■■■□ 3.85
LINC01578-208ENST00000557147 ATAD2BQ9ULI0 1458 aa38.97■■■■□ 3.83
LINC01578-208ENST00000557147 SMARCA4P51532 1647 aa38.92■■■■□ 3.82
LINC01578-208ENST00000557147 SMARCA2P51531 1590 aa38.88■■■■□ 3.81
LINC01578-208ENST00000557147 BAZ1AQ9NRL2 1556 aaPredicted RBP38.86■■■■□ 3.81
LINC01578-208ENST00000557147 HMGXB3Q12766 1538 aa38.78■■■■□ 3.8
LINC01578-208ENST00000557147 PEG3Q9GZU2 1588 aa38.64■■■■□ 3.78
LINC01578-208ENST00000557147 BAZ1BQ9UIG0 1483 aaKnown RBP38.58■■■■□ 3.77
LINC01578-208ENST00000557147 MROH2BQ7Z745 1585 aa38.53■■■■□ 3.76
LINC01578-208ENST00000557147 ERCC6Q03468 1493 aa38.35■■■■□ 3.73
LINC01578-208ENST00000557147 CUX2O14529 1486 aa38.25■■■■□ 3.71
LINC01578-208ENST00000557147 NESP48681 1621 aa38.2■■■■□ 3.7
LINC01578-208ENST00000557147 LAMC3Q9Y6N6 1575 aa38.09■■■■□ 3.69
LINC01578-208ENST00000557147 WIZO95785 1651 aa38■■■■□ 3.67
LINC01578-208ENST00000557147 PDS5BQ9NTI5 1447 aa37.93■■■■□ 3.66
LINC01578-208ENST00000557147 CADPSQ9ULU8 1353 aa37.92■■■■□ 3.66
LINC01578-208ENST00000557147 RSF1Q96T23 1441 aaPredicted RBP37.91■■■■□ 3.66
LINC01578-208ENST00000557147 DNAJC5Q9H3Z4 198 aa37.88■■■■□ 3.65
LINC01578-208ENST00000557147 THOC2Q8NI27 1593 aaKnown RBP37.76■■■■□ 3.63
LINC01578-208ENST00000557147 TOP2AP11388 1531 aaKnown RBP37.66■■■■□ 3.62
LINC01578-208ENST00000557147 KIF21AQ7Z4S6 1674 aa37.64■■■■□ 3.62
LINC01578-208ENST00000557147 CFTRP13569 1480 aa37.53■■■■□ 3.6
LINC01578-208ENST00000557147 MRC2Q9UBG0 1479 aa37.52■■■■□ 3.6
LINC01578-208ENST00000557147 CEP164Q9UPV0 1460 aa37.42■■■■□ 3.58
LINC01578-208ENST00000557147 FANCD2Q9BXW9 1451 aa37.41■■■■□ 3.58
LINC01578-208ENST00000557147 WDR62O43379 1518 aa37.4■■■■□ 3.58
LINC01578-208ENST00000557147 CCDC88BA6NC98 1476 aa37.24■■■■□ 3.55
LINC01578-208ENST00000557147 URB2Q14146 1524 aaKnown RBP37.05■■■■□ 3.52
LINC01578-208ENST00000557147 PRDM2Q13029 1718 aa36.99■■■■□ 3.51
LINC01578-208ENST00000557147 ABCC8Q09428 1581 aa36.78■■■■□ 3.48
LINC01578-208ENST00000557147 TOPBP1Q92547 1522 aa36.73■■■■□ 3.47
LINC01578-208ENST00000557147 IFT140Q96RY7 1462 aa36.71■■■■□ 3.47
LINC01578-208ENST00000557147 DNMBPQ6XZF7 1577 aa36.61■■■■□ 3.45
LINC01578-208ENST00000557147 OSCARQ8IYS5 282 aa36.59■■■■□ 3.45
LINC01578-208ENST00000557147 ZNF608Q9ULD9 1512 aaPredicted RBP36.51■■■■□ 3.44
LINC01578-208ENST00000557147 SUPT5HO00267 1087 aaKnown RBP36.41■■■■□ 3.42
LINC01578-208ENST00000557147 POLA1P09884 1462 aaPredicted RBP36.37■■■■□ 3.41
LINC01578-208ENST00000557147 TARBP1Q13395 1621 aaKnown RBP36.34■■■■□ 3.41
LINC01578-208ENST00000557147 EIF4G3O43432 1585 aaKnown RBP36.3■■■■□ 3.4
LINC01578-208ENST00000557147 SOGA1O94964 1423 aa36.26■■■■□ 3.4
LINC01578-208ENST00000557147 AQRO60306 1485 aaKnown RBP eCLIP36.25■■■■□ 3.392e-20■■■■□ 22
LINC01578-208ENST00000557147 TRIM41Q8WV44 630 aa36.21■■■■□ 3.39
LINC01578-208ENST00000557147 RAD54L2Q9Y4B4 1467 aa36.19■■■■□ 3.38
LINC01578-208ENST00000557147 CUX1P39880 1505 aa36.18■■■■□ 3.38
LINC01578-208ENST00000557147 FGD5Q6ZNL6 1462 aa36.18■■■■□ 3.38
LINC01578-208ENST00000557147 WDR97A6NE52 1622 aa36.11■■■■□ 3.37
LINC01578-208ENST00000557147 TDRD9Q8NDG6 1382 aaKnown RBP36.1■■■■□ 3.37
LINC01578-208ENST00000557147 FBLN2P98095 1184 aa35.95■■■■□ 3.35
LINC01578-208ENST00000557147 GRIN2BQ13224 1484 aa35.92■■■■□ 3.34
LINC01578-208ENST00000557147 RIMBP3CA6NJZ7 1639 aa35.9■■■■□ 3.34
LINC01578-208ENST00000557147 RIMBP3BA6NNM3 1639 aa35.9■■■■□ 3.34
LINC01578-208ENST00000557147 RIMBP3Q9UFD9 1639 aa35.9■■■■□ 3.34
LINC01578-208ENST00000557147 CHD1O14646 1710 aa35.89■■■■□ 3.34
LINC01578-208ENST00000557147 SNAPC4Q5SXM2 1469 aa35.89■■■■□ 3.34
LINC01578-208ENST00000557147 MAGI1Q96QZ7 1491 aaPredicted RBP35.89■■■■□ 3.34
LINC01578-208ENST00000557147 ARHGEF11O15085 1522 aa35.88■■■■□ 3.33
LINC01578-208ENST00000557147 ABCA10Q8WWZ4 1543 aa35.85■■■■□ 3.33
LINC01578-208ENST00000557147 CHMP7Q8WUX9 453 aaPredicted RBP35.82■■■■□ 3.32
LINC01578-208ENST00000557147 GAPVD1Q14C86 1478 aa35.8■■■■□ 3.32
LINC01578-208ENST00000557147 WRNQ14191 1432 aaPredicted RBP eCLIP35.8■■■■□ 3.32
LINC01578-208ENST00000557147 SYNJ2O15056 1496 aa35.75■■■■□ 3.31
LINC01578-208ENST00000557147 TOP2BQ02880 1626 aa35.71■■■■□ 3.31
LINC01578-208ENST00000557147 ABCA5Q8WWZ7 1642 aa35.68■■■■□ 3.3
LINC01578-208ENST00000557147 BIVM-ERCC5R4GMW8 1640 aa35.67■■■■□ 3.3
LINC01578-208ENST00000557147 SYNJ1O43426 1573 aa35.65■■■■□ 3.3
LINC01578-208ENST00000557147 CYB5RLQ6IPT4 315 aa35.63■■■■□ 3.29
LINC01578-208ENST00000557147 CLASP1Q7Z460 1538 aa35.62■■■■□ 3.29
LINC01578-208ENST00000557147 PBRM1Q86U86 1689 aa35.61■■■■□ 3.29
LINC01578-208ENST00000557147 ARAP1Q96P48 1450 aa35.55■■■■□ 3.28
LINC01578-208ENST00000557147 GRIN2AQ12879 1464 aa35.41■■■■□ 3.26
LINC01578-208ENST00000557147 ERICH3Q5RHP9 1530 aa35.41■■■■□ 3.26
LINC01578-208ENST00000557147 FHAD1B1AJZ9 1412 aa35.4■■■■□ 3.26
LINC01578-208ENST00000557147 ADAMTS12P58397 1594 aa35.38■■■■□ 3.25
LINC01578-208ENST00000557147 NUP160Q12769 1436 aa35.32■■■■□ 3.25
LINC01578-208ENST00000557147 CEP170Q5SW79 1584 aa35.2■■■■□ 3.23
LINC01578-208ENST00000557147 TRHP20396 242 aaPredicted RBP35.11■■■■□ 3.21
LINC01578-208ENST00000557147 KIF27Q86VH2 1401 aa35.1■■■■□ 3.21
LINC01578-208ENST00000557147 IGF1RP08069 1367 aa35.06■■■■□ 3.2
LINC01578-208ENST00000557147 SHROOM2Q13796 1616 aa35.06■■■■□ 3.2
LINC01578-208ENST00000557147 ERCC6L2Q5T890 1561 aa35■■■■□ 3.19
LINC01578-208ENST00000557147 JPH4Q96JJ6 628 aa35■■■■□ 3.19
LINC01578-208ENST00000557147 PRG4Q92954 1404 aaPredicted RBP34.92■■■■□ 3.18
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms