RNA–Protein interactions for RNA: ENST00000590236.5

ETV4-210, Transcript of ETS variant 4, humanhuman

TSL 3

Gene ETV4, Length 616 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ETV4-210ENST00000590236 NISCHQ9Y2I1 1504 aa39.55■■■■□ 3.92
ETV4-210ENST00000590236 ABCC9O60706 1549 aa35.45■■■■□ 3.27
ETV4-210ENST00000590236 CCDC180Q9P1Z9 1646 aa35.39■■■■□ 3.26
ETV4-210ENST00000590236 RB1CC1Q8TDY2 1594 aa33.68■■■□□ 2.98
ETV4-210ENST00000590236 DCAF8L2P0C7V8 631 aa33.45■■■□□ 2.95
ETV4-210ENST00000590236 NACADO15069 1562 aa33.44■■■□□ 2.94
ETV4-210ENST00000590236 DNAJC5BQ9UF47 199 aa33.15■■■□□ 2.9
ETV4-210ENST00000590236 PABPN1Q86U42 306 aaKnown RBP eCLIP33.04■■■□□ 2.88
ETV4-210ENST00000590236 MYO15BQ96JP2 1530 aa32.97■■■□□ 2.87
ETV4-210ENST00000590236 UNC13AQ9UPW8 1703 aa32.88■■■□□ 2.85
ETV4-210ENST00000590236 ZCCHC6Q5VYS8 1495 aaKnown RBP32.82■■■□□ 2.84
ETV4-210ENST00000590236 BICRAQ9NZM4 1560 aa32.72■■■□□ 2.83
ETV4-210ENST00000590236 DCAF1Q9Y4B6 1507 aa32.61■■■□□ 2.81
ETV4-210ENST00000590236 SCRIBQ14160 1630 aa32.4■■■□□ 2.78
ETV4-210ENST00000590236 SHROOM4Q9ULL8 1493 aa32.2■■■□□ 2.75
ETV4-210ENST00000590236 CC2D2AQ9P2K1 1620 aa31.97■■■□□ 2.71
ETV4-210ENST00000590236 EIF4G1Q04637 1599 aaKnown RBP31.92■■■□□ 2.7
ETV4-210ENST00000590236 CECR2Q9BXF3 1484 aa31.88■■■□□ 2.69
ETV4-210ENST00000590236 NCAPD3P42695 1498 aa30.89■■■□□ 2.53
ETV4-210ENST00000590236 ATAD2BQ9ULI0 1458 aa30.86■■■□□ 2.53
ETV4-210ENST00000590236 SMARCA4P51532 1647 aa30.84■■■□□ 2.53
ETV4-210ENST00000590236 SMARCA2P51531 1590 aa30.74■■■□□ 2.51
ETV4-210ENST00000590236 BAZ1AQ9NRL2 1556 aaPredicted RBP30.69■■■□□ 2.5
ETV4-210ENST00000590236 HMGXB3Q12766 1538 aa30.68■■■□□ 2.5
ETV4-210ENST00000590236 BAZ1BQ9UIG0 1483 aaKnown RBP30.58■■■□□ 2.49
ETV4-210ENST00000590236 ERCC6Q03468 1493 aa30.57■■■□□ 2.48
ETV4-210ENST00000590236 MROH2BQ7Z745 1585 aa30.53■■■□□ 2.48
ETV4-210ENST00000590236 PEG3Q9GZU2 1588 aa30.49■■■□□ 2.47
ETV4-210ENST00000590236 NESP48681 1621 aa30.48■■■□□ 2.47
ETV4-210ENST00000590236 CUX2O14529 1486 aa30.41■■■□□ 2.46
ETV4-210ENST00000590236 DNAJC5Q9H3Z4 198 aa30.28■■■□□ 2.44
ETV4-210ENST00000590236 LAMC3Q9Y6N6 1575 aa30.17■■■□□ 2.42
ETV4-210ENST00000590236 WIZO95785 1651 aa30.15■■■□□ 2.42
ETV4-210ENST00000590236 THOC2Q8NI27 1593 aaKnown RBP30.1■■■□□ 2.41
ETV4-210ENST00000590236 KIF21AQ7Z4S6 1674 aa30.02■■■□□ 2.4
ETV4-210ENST00000590236 PDS5BQ9NTI5 1447 aa30.02■■■□□ 2.4
ETV4-210ENST00000590236 CADPSQ9ULU8 1353 aa29.98■■■□□ 2.39
ETV4-210ENST00000590236 RSF1Q96T23 1441 aaPredicted RBP29.92■■■□□ 2.38
ETV4-210ENST00000590236 MRC2Q9UBG0 1479 aa29.79■■■□□ 2.36
ETV4-210ENST00000590236 TOP2AP11388 1531 aaKnown RBP29.77■■■□□ 2.36
ETV4-210ENST00000590236 CEP164Q9UPV0 1460 aa29.7■■■□□ 2.35
ETV4-210ENST00000590236 WDR62O43379 1518 aa29.69■■■□□ 2.34
ETV4-210ENST00000590236 FANCD2Q9BXW9 1451 aa29.68■■■□□ 2.34
ETV4-210ENST00000590236 CFTRP13569 1480 aa29.66■■■□□ 2.34
ETV4-210ENST00000590236 CCDC88BA6NC98 1476 aa29.45■■■□□ 2.31
ETV4-210ENST00000590236 URB2Q14146 1524 aaKnown RBP29.45■■■□□ 2.3
ETV4-210ENST00000590236 PRDM2Q13029 1718 aa29.29■■■□□ 2.28
ETV4-210ENST00000590236 TRIM41Q8WV44 630 aa29.13■■■□□ 2.25
ETV4-210ENST00000590236 TOPBP1Q92547 1522 aa29.12■■■□□ 2.25
ETV4-210ENST00000590236 ZNF608Q9ULD9 1512 aaPredicted RBP29.09■■■□□ 2.25
ETV4-210ENST00000590236 IFT140Q96RY7 1462 aa29.07■■■□□ 2.24
ETV4-210ENST00000590236 OSCARQ8IYS5 282 aa29.04■■■□□ 2.24
ETV4-210ENST00000590236 DNMBPQ6XZF7 1577 aa29.01■■■□□ 2.23
ETV4-210ENST00000590236 ABCC8Q09428 1581 aa28.97■■■□□ 2.23
ETV4-210ENST00000590236 EIF4G3O43432 1585 aaKnown RBP28.91■■■□□ 2.22
ETV4-210ENST00000590236 POLA1P09884 1462 aaPredicted RBP28.85■■■□□ 2.21
ETV4-210ENST00000590236 AQRO60306 1485 aaKnown RBP eCLIP28.83■■■□□ 2.213e-7■■■□□ 16.9
ETV4-210ENST00000590236 TARBP1Q13395 1621 aaKnown RBP28.83■■■□□ 2.21
ETV4-210ENST00000590236 RAD54L2Q9Y4B4 1467 aa28.78■■■□□ 2.2
ETV4-210ENST00000590236 SUPT5HO00267 1087 aaKnown RBP28.75■■■□□ 2.19
ETV4-210ENST00000590236 SOGA1O94964 1423 aa28.69■■■□□ 2.18
ETV4-210ENST00000590236 RIMBP3CA6NJZ7 1639 aa28.69■■■□□ 2.18
ETV4-210ENST00000590236 RIMBP3BA6NNM3 1639 aa28.69■■■□□ 2.18
ETV4-210ENST00000590236 RIMBP3Q9UFD9 1639 aa28.69■■■□□ 2.18
ETV4-210ENST00000590236 FGD5Q6ZNL6 1462 aa28.69■■■□□ 2.18
ETV4-210ENST00000590236 CUX1P39880 1505 aa28.68■■■□□ 2.18
ETV4-210ENST00000590236 TDRD9Q8NDG6 1382 aaKnown RBP28.67■■■□□ 2.18
ETV4-210ENST00000590236 FBLN2P98095 1184 aa28.65■■■□□ 2.18
ETV4-210ENST00000590236 CHD1O14646 1710 aa28.63■■■□□ 2.17
ETV4-210ENST00000590236 ARHGEF11O15085 1522 aa28.63■■■□□ 2.17
ETV4-210ENST00000590236 SNAPC4Q5SXM2 1469 aa28.54■■■□□ 2.16
ETV4-210ENST00000590236 WDR97A6NE52 1622 aa28.47■■■□□ 2.15
ETV4-210ENST00000590236 GRIN2BQ13224 1484 aa28.43■■■□□ 2.14
ETV4-210ENST00000590236 CYB5RLQ6IPT4 315 aa28.42■■■□□ 2.14
ETV4-210ENST00000590236 MAGI1Q96QZ7 1491 aaPredicted RBP28.4■■■□□ 2.14
ETV4-210ENST00000590236 CHMP7Q8WUX9 453 aaPredicted RBP28.39■■■□□ 2.14
ETV4-210ENST00000590236 ARAP1Q96P48 1450 aa28.38■■■□□ 2.13
ETV4-210ENST00000590236 GAPVD1Q14C86 1478 aa28.34■■■□□ 2.13
ETV4-210ENST00000590236 ABCA10Q8WWZ4 1543 aa28.33■■■□□ 2.13
ETV4-210ENST00000590236 SYNJ2O15056 1496 aa28.32■■■□□ 2.12
ETV4-210ENST00000590236 CLASP1Q7Z460 1538 aa28.32■■■□□ 2.12
ETV4-210ENST00000590236 PBRM1Q86U86 1689 aa28.31■■■□□ 2.12
ETV4-210ENST00000590236 SYNJ1O43426 1573 aa28.29■■■□□ 2.12
ETV4-210ENST00000590236 ABCA5Q8WWZ7 1642 aa28.29■■■□□ 2.12
ETV4-210ENST00000590236 WRNQ14191 1432 aaPredicted RBP eCLIP28.24■■■□□ 2.11
ETV4-210ENST00000590236 TOP2BQ02880 1626 aa28.19■■■□□ 2.1
ETV4-210ENST00000590236 BIVM-ERCC5R4GMW8 1640 aa28.18■■■□□ 2.1
ETV4-210ENST00000590236 TRHP20396 242 aaPredicted RBP28.1■■■□□ 2.09
ETV4-210ENST00000590236 ADAMTS12P58397 1594 aa28.09■■■□□ 2.09
ETV4-210ENST00000590236 GRIN2AQ12879 1464 aa28.08■■■□□ 2.09
ETV4-210ENST00000590236 CEP170Q5SW79 1584 aa27.99■■■□□ 2.07
ETV4-210ENST00000590236 FHAD1B1AJZ9 1412 aa27.98■■■□□ 2.07
ETV4-210ENST00000590236 NUP160Q12769 1436 aa27.96■■■□□ 2.07
ETV4-210ENST00000590236 ERCC6L2Q5T890 1561 aa27.95■■■□□ 2.07
ETV4-210ENST00000590236 ERICH3Q5RHP9 1530 aa27.95■■■□□ 2.06
ETV4-210ENST00000590236 SHROOM2Q13796 1616 aa27.8■■■□□ 2.04
ETV4-210ENST00000590236 PRG4Q92954 1404 aaPredicted RBP27.72■■■□□ 2.03
ETV4-210ENST00000590236 RUSC2Q8N2Y8 1516 aa27.69■■■□□ 2.02
ETV4-210ENST00000590236 JPH4Q96JJ6 628 aa27.67■■■□□ 2.02
ETV4-210ENST00000590236 KIF27Q86VH2 1401 aa27.67■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms