RNA–Protein interactions for RNA: ENST00000567954.5

LYRM1-208, Transcript of LYR motif containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYRM1, Length 460 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYRM1-208ENST00000567954 NISCHQ9Y2I1 1504 aa19.71■□□□□ 0.75
LYRM1-208ENST00000567954 DNAJC5BQ9UF47 199 aa19.48■□□□□ 0.71
LYRM1-208ENST00000567954 ABCC9O60706 1549 aa19.44■□□□□ 0.7
LYRM1-208ENST00000567954 DNAJC5Q9H3Z4 198 aa18.84■□□□□ 0.61
LYRM1-208ENST00000567954 CCDC180Q9P1Z9 1646 aa18.05■□□□□ 0.48
LYRM1-208ENST00000567954 PABPN1Q86U42 306 aaKnown RBP eCLIP18■□□□□ 0.47
LYRM1-208ENST00000567954 RB1CC1Q8TDY2 1594 aa17.9■□□□□ 0.46
LYRM1-208ENST00000567954 CECR2Q9BXF3 1484 aa17.68■□□□□ 0.42
LYRM1-208ENST00000567954 NACADO15069 1562 aa17.51■□□□□ 0.39
LYRM1-208ENST00000567954 TRIM41Q8WV44 630 aa17.43■□□□□ 0.38
LYRM1-208ENST00000567954 CC2D2AQ9P2K1 1620 aa17.43■□□□□ 0.38
LYRM1-208ENST00000567954 BICRAQ9NZM4 1560 aa17.41■□□□□ 0.38
LYRM1-208ENST00000567954 CUX2O14529 1486 aa17.31■□□□□ 0.36
LYRM1-208ENST00000567954 DCAF8L2P0C7V8 631 aa17.28■□□□□ 0.36
LYRM1-208ENST00000567954 UNC13AQ9UPW8 1703 aa17.24■□□□□ 0.35
LYRM1-208ENST00000567954 SHROOM4Q9ULL8 1493 aa17.13■□□□□ 0.33
LYRM1-208ENST00000567954 EIF4G1Q04637 1599 aaKnown RBP17.11■□□□□ 0.33
LYRM1-208ENST00000567954 MYO15BQ96JP2 1530 aa16.91■□□□□ 0.3
LYRM1-208ENST00000567954 ERCC6Q03468 1493 aa16.89■□□□□ 0.29
LYRM1-208ENST00000567954 AEBP2Q6ZN18 517 aaPredicted RBP16.76■□□□□ 0.27
LYRM1-208ENST00000567954 SCRIBQ14160 1630 aa16.54■□□□□ 0.24
LYRM1-208ENST00000567954 OSCARQ8IYS5 282 aa16.4■□□□□ 0.22
LYRM1-208ENST00000567954 NESP48681 1621 aa16.33■□□□□ 0.2
LYRM1-208ENST00000567954 THOC2Q8NI27 1593 aaKnown RBP16.32■□□□□ 0.2
LYRM1-208ENST00000567954 ILDR1Q86SU0 546 aaPredicted RBP16.31■□□□□ 0.2
LYRM1-208ENST00000567954 TRHP20396 242 aaPredicted RBP16.3■□□□□ 0.2
LYRM1-208ENST00000567954 NCAPD3P42695 1498 aa16.28■□□□□ 0.2
LYRM1-208ENST00000567954 DCAF1Q9Y4B6 1507 aa16.21■□□□□ 0.19
LYRM1-208ENST00000567954 BAZ1AQ9NRL2 1556 aaPredicted RBP16.13■□□□□ 0.17
LYRM1-208ENST00000567954 SMARCA2P51531 1590 aa16.12■□□□□ 0.17
LYRM1-208ENST00000567954 RIMBP3CA6NJZ7 1639 aa16.11■□□□□ 0.17
LYRM1-208ENST00000567954 RIMBP3BA6NNM3 1639 aa16.11■□□□□ 0.17
LYRM1-208ENST00000567954 RIMBP3Q9UFD9 1639 aa16.11■□□□□ 0.17
LYRM1-208ENST00000567954 CYB5RLQ6IPT4 315 aa16.09■□□□□ 0.17
LYRM1-208ENST00000567954 PDS5BQ9NTI5 1447 aa16.05■□□□□ 0.16
LYRM1-208ENST00000567954 ZCCHC6Q5VYS8 1495 aaKnown RBP16.04■□□□□ 0.16
LYRM1-208ENST00000567954 ARHGEF11O15085 1522 aa16.01■□□□□ 0.15
LYRM1-208ENST00000567954 ATAD2BQ9ULI0 1458 aa16.01■□□□□ 0.15
LYRM1-208ENST00000567954 LAMC3Q9Y6N6 1575 aa15.98■□□□□ 0.15
LYRM1-208ENST00000567954 HMGXB3Q12766 1538 aa15.93■□□□□ 0.14
LYRM1-208ENST00000567954 MRC2Q9UBG0 1479 aa15.92■□□□□ 0.14
LYRM1-208ENST00000567954 WDR62O43379 1518 aa15.89■□□□□ 0.13
LYRM1-208ENST00000567954 KIF21AQ7Z4S6 1674 aa15.89■□□□□ 0.13
LYRM1-208ENST00000567954 ARAP1Q96P48 1450 aa15.78■□□□□ 0.12
LYRM1-208ENST00000567954 BAZ1BQ9UIG0 1483 aaKnown RBP15.74■□□□□ 0.11
LYRM1-208ENST00000567954 CADPSQ9ULU8 1353 aa15.74■□□□□ 0.11
LYRM1-208ENST00000567954 CEP164Q9UPV0 1460 aa15.59■□□□□ 0.09
LYRM1-208ENST00000567954 RSF1Q96T23 1441 aaPredicted RBP15.59■□□□□ 0.09
LYRM1-208ENST00000567954 SMARCA4P51532 1647 aa15.54■□□□□ 0.08
LYRM1-208ENST00000567954 KDM4FA0A1W2PPD8 638 aa15.52■□□□□ 0.08
LYRM1-208ENST00000567954 FANCD2Q9BXW9 1451 aa15.49■□□□□ 0.07
LYRM1-208ENST00000567954 PEG3Q9GZU2 1588 aa15.46■□□□□ 0.07
LYRM1-208ENST00000567954 ZNF608Q9ULD9 1512 aaPredicted RBP15.44■□□□□ 0.06
LYRM1-208ENST00000567954 FBXO41Q8TF61 875 aa15.44■□□□□ 0.06
LYRM1-208ENST00000567954 URB2Q14146 1524 aaKnown RBP15.42■□□□□ 0.06
LYRM1-208ENST00000567954 FBLN2P98095 1184 aa15.37■□□□□ 0.05
LYRM1-208ENST00000567954 IFT140Q96RY7 1462 aa15.37■□□□□ 0.05
LYRM1-208ENST00000567954 LMTK3Q96Q04 1460 aa15.36■□□□□ 0.05
LYRM1-208ENST00000567954 SOCS7O14512 581 aa15.36■□□□□ 0.05
LYRM1-208ENST00000567954 CFTRP13569 1480 aa15.26■□□□□ 0.03
LYRM1-208ENST00000567954 ERCC6L2Q5T890 1561 aa15.25■□□□□ 0.03
LYRM1-208ENST00000567954 ILDR2Q71H61 639 aa15.2■□□□□ 0.02
LYRM1-208ENST00000567954 CHD1O14646 1710 aa15.2■□□□□ 0.02
LYRM1-208ENST00000567954 AQRO60306 1485 aaKnown RBP eCLIP15.19■□□□□ 0.02
LYRM1-208ENST00000567954 GAPVD1Q14C86 1478 aa15.18■□□□□ 0.02
LYRM1-208ENST00000567954 EIF4G3O43432 1585 aaKnown RBP15.18■□□□□ 0.02
LYRM1-208ENST00000567954 CLASP1Q7Z460 1538 aa15.17■□□□□ 0.02
LYRM1-208ENST00000567954 MROH2BQ7Z745 1585 aa15.15■□□□□ 0.02
LYRM1-208ENST00000567954 HECW2Q9P2P5 1572 aa15.12■□□□□ 0.01
LYRM1-208ENST00000567954 CHMP7Q8WUX9 453 aaPredicted RBP15.08■□□□□ 0
LYRM1-208ENST00000567954 SYNJ2O15056 1496 aa15.05■□□□□ -0
LYRM1-208ENST00000567954 SYNJ1O43426 1573 aa15.03■□□□□ -0
LYRM1-208ENST00000567954 TOPBP1Q92547 1522 aa15.03■□□□□ -0
LYRM1-208ENST00000567954 DISP3Q9P2K9 1392 aa15.03■□□□□ -0
LYRM1-208ENST00000567954 FAM69CQ0P6D2 419 aa15.03■□□□□ -0
LYRM1-208ENST00000567954 ADGRL1O94910 1474 aa14.97□□□□□ -0.01
LYRM1-208ENST00000567954 ABCC8Q09428 1581 aa14.95□□□□□ -0.02
LYRM1-208ENST00000567954 SNAPC4Q5SXM2 1469 aa14.95□□□□□ -0.02
LYRM1-208ENST00000567954 KIF13AQ9H1H9 1805 aa14.92□□□□□ -0.02
LYRM1-208ENST00000567954 TDRD9Q8NDG6 1382 aaKnown RBP14.92□□□□□ -0.02
LYRM1-208ENST00000567954 ABCC10Q5T3U5 1492 aa14.92□□□□□ -0.02
LYRM1-208ENST00000567954 KDM6BO15054 1643 aa14.92□□□□□ -0.02
LYRM1-208ENST00000567954 TARBP1Q13395 1621 aaKnown RBP14.92□□□□□ -0.02
LYRM1-208ENST00000567954 MAGI1Q96QZ7 1491 aaPredicted RBP14.87□□□□□ -0.03
LYRM1-208ENST00000567954 DNMBPQ6XZF7 1577 aa14.81□□□□□ -0.04
LYRM1-208ENST00000567954 POLA1P09884 1462 aaPredicted RBP14.81□□□□□ -0.04
LYRM1-208ENST00000567954 WIZO95785 1651 aa14.8□□□□□ -0.04
LYRM1-208ENST00000567954 RAD54L2Q9Y4B4 1467 aa14.79□□□□□ -0.04
LYRM1-208ENST00000567954 SOGA1O94964 1423 aa14.78□□□□□ -0.04
LYRM1-208ENST00000567954 NPM1P06748 294 aaKnown RBP eCLIP14.78□□□□□ -0.04
LYRM1-208ENST00000567954 GRIN2BQ13224 1484 aa14.76□□□□□ -0.05
LYRM1-208ENST00000567954 DIP2BQ9P265 1576 aa14.73□□□□□ -0.05
LYRM1-208ENST00000567954 MAPKBP1O60336 1514 aa14.71□□□□□ -0.06
LYRM1-208ENST00000567954 WDR97A6NE52 1622 aa14.7□□□□□ -0.06
LYRM1-208ENST00000567954 CEP170Q5SW79 1584 aa14.68□□□□□ -0.06
LYRM1-208ENST00000567954 CERKQ8TCT0 537 aa14.66□□□□□ -0.06
LYRM1-208ENST00000567954 PRDM2Q13029 1718 aa14.63□□□□□ -0.07
LYRM1-208ENST00000567954 TOP2AP11388 1531 aaKnown RBP14.61□□□□□ -0.07
LYRM1-208ENST00000567954 SPATA31D1Q6ZQQ2 1576 aa14.6□□□□□ -0.07
LYRM1-208ENST00000567954 NUP160Q12769 1436 aa14.58□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms