RNA–Protein interactions for RNA: ENST00000449538.3

HIST1H2BN-202, Transcript of histone cluster 1 H2B family member n, humanhuman

TSL 1 (best)

Gene HIST1H2BN, Length 715 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2BN-202ENST00000449538 NISCHQ9Y2I1 1504 aa42.57■■■■■ 4.41
HIST1H2BN-202ENST00000449538 CCDC180Q9P1Z9 1646 aa37.94■■■■□ 3.66
HIST1H2BN-202ENST00000449538 ABCC9O60706 1549 aa37.19■■■■□ 3.54
HIST1H2BN-202ENST00000449538 RB1CC1Q8TDY2 1594 aa35.76■■■■□ 3.32
HIST1H2BN-202ENST00000449538 NACADO15069 1562 aa35.69■■■■□ 3.3
HIST1H2BN-202ENST00000449538 DCAF8L2P0C7V8 631 aa35.63■■■■□ 3.29
HIST1H2BN-202ENST00000449538 MYO15BQ96JP2 1530 aa35.44■■■■□ 3.26
HIST1H2BN-202ENST00000449538 ZCCHC6Q5VYS8 1495 aaKnown RBP35.44■■■■□ 3.26
HIST1H2BN-202ENST00000449538 DCAF1Q9Y4B6 1507 aa35.24■■■■□ 3.23
HIST1H2BN-202ENST00000449538 UNC13AQ9UPW8 1703 aa34.92■■■■□ 3.18
HIST1H2BN-202ENST00000449538 PABPN1Q86U42 306 aaKnown RBP eCLIP34.72■■■■□ 3.15
HIST1H2BN-202ENST00000449538 BICRAQ9NZM4 1560 aa34.63■■■■□ 3.13
HIST1H2BN-202ENST00000449538 SCRIBQ14160 1630 aa34.58■■■■□ 3.13
HIST1H2BN-202ENST00000449538 SHROOM4Q9ULL8 1493 aa34.33■■■■□ 3.09
HIST1H2BN-202ENST00000449538 DNAJC5BQ9UF47 199 aa34.19■■■■□ 3.06
HIST1H2BN-202ENST00000449538 EIF4G1Q04637 1599 aaKnown RBP33.75■■■□□ 2.99
HIST1H2BN-202ENST00000449538 CC2D2AQ9P2K1 1620 aa33.64■■■□□ 2.98
HIST1H2BN-202ENST00000449538 CECR2Q9BXF3 1484 aa33.44■■■□□ 2.94
HIST1H2BN-202ENST00000449538 SMARCA4P51532 1647 aa33.06■■■□□ 2.88
HIST1H2BN-202ENST00000449538 BAZ1AQ9NRL2 1556 aaPredicted RBP33.04■■■□□ 2.88
HIST1H2BN-202ENST00000449538 NCAPD3P42695 1498 aa32.91■■■□□ 2.86
HIST1H2BN-202ENST00000449538 ATAD2BQ9ULI0 1458 aa32.91■■■□□ 2.86
HIST1H2BN-202ENST00000449538 SMARCA2P51531 1590 aa32.9■■■□□ 2.86
HIST1H2BN-202ENST00000449538 MROH2BQ7Z745 1585 aa32.79■■■□□ 2.84
HIST1H2BN-202ENST00000449538 HMGXB3Q12766 1538 aa32.76■■■□□ 2.83
HIST1H2BN-202ENST00000449538 PEG3Q9GZU2 1588 aa32.75■■■□□ 2.83
HIST1H2BN-202ENST00000449538 BAZ1BQ9UIG0 1483 aaKnown RBP32.66■■■□□ 2.82
HIST1H2BN-202ENST00000449538 WIZO95785 1651 aa32.44■■■□□ 2.78
HIST1H2BN-202ENST00000449538 RSF1Q96T23 1441 aaPredicted RBP32.38■■■□□ 2.77
HIST1H2BN-202ENST00000449538 NESP48681 1621 aa32.13■■■□□ 2.73
HIST1H2BN-202ENST00000449538 TOP2AP11388 1531 aaKnown RBP32.11■■■□□ 2.73
HIST1H2BN-202ENST00000449538 ERCC6Q03468 1493 aa32.1■■■□□ 2.73
HIST1H2BN-202ENST00000449538 LAMC3Q9Y6N6 1575 aa32.08■■■□□ 2.73
HIST1H2BN-202ENST00000449538 CADPSQ9ULU8 1353 aa31.95■■■□□ 2.71
HIST1H2BN-202ENST00000449538 PDS5BQ9NTI5 1447 aa31.88■■■□□ 2.69
HIST1H2BN-202ENST00000449538 CUX2O14529 1486 aa31.8■■■□□ 2.68
HIST1H2BN-202ENST00000449538 KIF21AQ7Z4S6 1674 aa31.77■■■□□ 2.68
HIST1H2BN-202ENST00000449538 CFTRP13569 1480 aa31.73■■■□□ 2.67
HIST1H2BN-202ENST00000449538 CCDC88BA6NC98 1476 aa31.72■■■□□ 2.67
HIST1H2BN-202ENST00000449538 THOC2Q8NI27 1593 aaKnown RBP31.69■■■□□ 2.66
HIST1H2BN-202ENST00000449538 FANCD2Q9BXW9 1451 aa31.59■■■□□ 2.65
HIST1H2BN-202ENST00000449538 CEP164Q9UPV0 1460 aa31.58■■■□□ 2.65
HIST1H2BN-202ENST00000449538 MRC2Q9UBG0 1479 aa31.54■■■□□ 2.64
HIST1H2BN-202ENST00000449538 PRDM2Q13029 1718 aa31.52■■■□□ 2.64
HIST1H2BN-202ENST00000449538 SUPT5HO00267 1087 aaKnown RBP31.49■■■□□ 2.63
HIST1H2BN-202ENST00000449538 WDR62O43379 1518 aa31.44■■■□□ 2.62
HIST1H2BN-202ENST00000449538 URB2Q14146 1524 aaKnown RBP31.26■■■□□ 2.59
HIST1H2BN-202ENST00000449538 ABCC8Q09428 1581 aa31.1■■■□□ 2.57
HIST1H2BN-202ENST00000449538 TOPBP1Q92547 1522 aa31.07■■■□□ 2.56
HIST1H2BN-202ENST00000449538 DNMBPQ6XZF7 1577 aa31.04■■■□□ 2.56
HIST1H2BN-202ENST00000449538 DNAJC5Q9H3Z4 198 aa30.93■■■□□ 2.54
HIST1H2BN-202ENST00000449538 IFT140Q96RY7 1462 aa30.92■■■□□ 2.54
HIST1H2BN-202ENST00000449538 POLA1P09884 1462 aaPredicted RBP30.79■■■□□ 2.52
HIST1H2BN-202ENST00000449538 CUX1P39880 1505 aa30.78■■■□□ 2.52
HIST1H2BN-202ENST00000449538 ZNF608Q9ULD9 1512 aaPredicted RBP30.74■■■□□ 2.51
HIST1H2BN-202ENST00000449538 TARBP1Q13395 1621 aaKnown RBP30.73■■■□□ 2.51
HIST1H2BN-202ENST00000449538 FGD5Q6ZNL6 1462 aa30.7■■■□□ 2.51
HIST1H2BN-202ENST00000449538 SOGA1O94964 1423 aa30.67■■■□□ 2.5
HIST1H2BN-202ENST00000449538 EIF4G3O43432 1585 aaKnown RBP30.65■■■□□ 2.5
HIST1H2BN-202ENST00000449538 RAD54L2Q9Y4B4 1467 aa30.64■■■□□ 2.5
HIST1H2BN-202ENST00000449538 AQRO60306 1485 aaKnown RBP eCLIP30.57■■■□□ 2.484e-10■■□□□ 12.5
HIST1H2BN-202ENST00000449538 WRNQ14191 1432 aaPredicted RBP eCLIP30.56■■■□□ 2.48
HIST1H2BN-202ENST00000449538 WDR97A6NE52 1622 aa30.52■■■□□ 2.48
HIST1H2BN-202ENST00000449538 BIVM-ERCC5R4GMW8 1640 aa30.51■■■□□ 2.47
HIST1H2BN-202ENST00000449538 TOP2BQ02880 1626 aa30.5■■■□□ 2.47
HIST1H2BN-202ENST00000449538 TDRD9Q8NDG6 1382 aaKnown RBP30.5■■■□□ 2.47
HIST1H2BN-202ENST00000449538 SYNJ1O43426 1573 aa30.47■■■□□ 2.47
HIST1H2BN-202ENST00000449538 OSCARQ8IYS5 282 aa30.46■■■□□ 2.47
HIST1H2BN-202ENST00000449538 ABCA10Q8WWZ4 1543 aa30.41■■■□□ 2.46
HIST1H2BN-202ENST00000449538 GRIN2BQ13224 1484 aa30.34■■■□□ 2.45
HIST1H2BN-202ENST00000449538 GAPVD1Q14C86 1478 aa30.32■■■□□ 2.44
HIST1H2BN-202ENST00000449538 SNAPC4Q5SXM2 1469 aa30.3■■■□□ 2.44
HIST1H2BN-202ENST00000449538 ABCA5Q8WWZ7 1642 aa30.29■■■□□ 2.44
HIST1H2BN-202ENST00000449538 CHD1O14646 1710 aa30.29■■■□□ 2.44
HIST1H2BN-202ENST00000449538 MAGI1Q96QZ7 1491 aaPredicted RBP30.28■■■□□ 2.44
HIST1H2BN-202ENST00000449538 PBRM1Q86U86 1689 aa30.27■■■□□ 2.44
HIST1H2BN-202ENST00000449538 FBLN2P98095 1184 aa30.26■■■□□ 2.43
HIST1H2BN-202ENST00000449538 CHMP7Q8WUX9 453 aaPredicted RBP30.16■■■□□ 2.42
HIST1H2BN-202ENST00000449538 SYNJ2O15056 1496 aa30.15■■■□□ 2.42
HIST1H2BN-202ENST00000449538 ERICH3Q5RHP9 1530 aa30.06■■■□□ 2.4
HIST1H2BN-202ENST00000449538 ADAMTS12P58397 1594 aa30.02■■■□□ 2.4
HIST1H2BN-202ENST00000449538 FHAD1B1AJZ9 1412 aa29.97■■■□□ 2.39
HIST1H2BN-202ENST00000449538 RIMBP3CA6NJZ7 1639 aa29.96■■■□□ 2.39
HIST1H2BN-202ENST00000449538 RIMBP3BA6NNM3 1639 aa29.96■■■□□ 2.39
HIST1H2BN-202ENST00000449538 RIMBP3Q9UFD9 1639 aa29.96■■■□□ 2.39
HIST1H2BN-202ENST00000449538 ARHGEF11O15085 1522 aa29.95■■■□□ 2.38
HIST1H2BN-202ENST00000449538 CLASP1Q7Z460 1538 aa29.95■■■□□ 2.38
HIST1H2BN-202ENST00000449538 KIF27Q86VH2 1401 aa29.95■■■□□ 2.38
HIST1H2BN-202ENST00000449538 GRIN2AQ12879 1464 aa29.93■■■□□ 2.38
HIST1H2BN-202ENST00000449538 TRIM41Q8WV44 630 aa29.88■■■□□ 2.37
HIST1H2BN-202ENST00000449538 NUP160Q12769 1436 aa29.8■■■□□ 2.36
HIST1H2BN-202ENST00000449538 IGF1RP08069 1367 aa29.8■■■□□ 2.36
HIST1H2BN-202ENST00000449538 CEP170Q5SW79 1584 aa29.78■■■□□ 2.36
HIST1H2BN-202ENST00000449538 CUL7Q14999 1698 aa29.78■■■□□ 2.36
HIST1H2BN-202ENST00000449538 ARAP1Q96P48 1450 aa29.69■■■□□ 2.34
HIST1H2BN-202ENST00000449538 CYB5RLQ6IPT4 315 aa29.68■■■□□ 2.34
HIST1H2BN-202ENST00000449538 CARMIL1Q5VZK9 1371 aa29.64■■■□□ 2.34
HIST1H2BN-202ENST00000449538 SHROOM2Q13796 1616 aa29.6■■■□□ 2.33
HIST1H2BN-202ENST00000449538 RUSC2Q8N2Y8 1516 aa29.58■■■□□ 2.33
HIST1H2BN-202ENST00000449538 KIAA0586Q9BVV6 1533 aa29.5■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms