RNA–Protein interactions for RNA: ENST00000533089.5

TGFBR3-210, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 6,455 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-210ENST00000533089 NISCHQ9Y2I1 1504 aa12.33□□□□□ -0.44
TGFBR3-210ENST00000533089 DCAF8L2P0C7V8 631 aa11.87□□□□□ -0.51
TGFBR3-210ENST00000533089 MYT1Q01538 1121 aa11.86□□□□□ -0.51
TGFBR3-210ENST00000533089 PELP1Q8IZL8 1130 aaKnown RBP11.82□□□□□ -0.52
TGFBR3-210ENST00000533089 TTBK1Q5TCY1 1321 aaPredicted RBP11.12□□□□□ -0.63
TGFBR3-210ENST00000533089 ERICH6Q7L0X2 663 aa11.06□□□□□ -0.64
TGFBR3-210ENST00000533089 EHMT2Q96KQ7 1210 aa11.04□□□□□ -0.64
TGFBR3-210ENST00000533089 SUPT5HO00267 1087 aaKnown RBP11.02□□□□□ -0.64
TGFBR3-210ENST00000533089 SHROOM4Q9ULL8 1493 aa10.94□□□□□ -0.66
TGFBR3-210ENST00000533089 CENPBP07199 599 aaPredicted RBP10.89□□□□□ -0.67
TGFBR3-210ENST00000533089 CCER1Q8TC90 406 aaPredicted RBP10.77□□□□□ -0.69
TGFBR3-210ENST00000533089 APLP2Q06481 763 aa10.67□□□□□ -0.7
TGFBR3-210ENST00000533089 ABCC9O60706 1549 aa10.65□□□□□ -0.7
TGFBR3-210ENST00000533089 PCGF6Q9BYE7 350 aa10.65□□□□□ -0.71
TGFBR3-210ENST00000533089 FAM9AQ8IZU1 332 aaPredicted RBP10.64□□□□□ -0.71
TGFBR3-210ENST00000533089 YTHDC1Q96MU7 727 aaKnown RBP10.55□□□□□ -0.72
TGFBR3-210ENST00000533089 RANGAP1P46060 587 aaPredicted RBP10.49□□□□□ -0.73
TGFBR3-210ENST00000533089 ZEB1P37275 1124 aaPredicted RBP10.46□□□□□ -0.74
TGFBR3-210ENST00000533089 HRCP23327 699 aa10.45□□□□□ -0.74
TGFBR3-210ENST00000533089 CCDC180Q9P1Z9 1646 aa10.45□□□□□ -0.74
TGFBR3-210ENST00000533089 ATP1B4Q9UN42 357 aaPredicted RBP10.44□□□□□ -0.74
TGFBR3-210ENST00000533089 NEFLP07196 543 aa10.38□□□□□ -0.75
TGFBR3-210ENST00000533089 EIF5BO60841 1220 aaKnown RBP10.34□□□□□ -0.75
TGFBR3-210ENST00000533089 PABPN1Q86U42 306 aaKnown RBP eCLIP10.31□□□□□ -0.76
TGFBR3-210ENST00000533089 RTL5Q5HYW3 569 aaPredicted RBP10.31□□□□□ -0.76
TGFBR3-210ENST00000533089 PPARGC1BQ86YN6 1023 aaKnown RBP10.3□□□□□ -0.76
TGFBR3-210ENST00000533089 CHIC1Q5VXU3 224 aa10.29□□□□□ -0.76
TGFBR3-210ENST00000533089 GTF3C3Q9Y5Q9 886 aa10.28□□□□□ -0.76
TGFBR3-210ENST00000533089 GLIPR1L2Q4G1C9 344 aa10.26□□□□□ -0.77
TGFBR3-210ENST00000533089 BCL11AQ9H165 835 aa10.26□□□□□ -0.77
TGFBR3-210ENST00000533089 ZCCHC6Q5VYS8 1495 aaKnown RBP10.24□□□□□ -0.77
TGFBR3-210ENST00000533089 MYT1LQ9UL68 1186 aa10.17□□□□□ -0.78
TGFBR3-210ENST00000533089 UBTFP17480 764 aaKnown RBP10.17□□□□□ -0.78
TGFBR3-210ENST00000533089 RB1CC1Q8TDY2 1594 aa10.16□□□□□ -0.78
TGFBR3-210ENST00000533089 TRIM41Q8WV44 630 aa10.15□□□□□ -0.78
TGFBR3-210ENST00000533089 DAXXQ9UER7 740 aaPredicted RBP10.14□□□□□ -0.79
TGFBR3-210ENST00000533089 CNGB1Q14028 1251 aaPredicted RBP10.12□□□□□ -0.79
TGFBR3-210ENST00000533089 NACADO15069 1562 aa10.1□□□□□ -0.79
TGFBR3-210ENST00000533089 SLC24A1O60721 1099 aa10.1□□□□□ -0.79
TGFBR3-210ENST00000533089 SCRIBQ14160 1630 aa10.07□□□□□ -0.8
TGFBR3-210ENST00000533089 ACIN1Q9UKV3 1341 aaKnown RBP10.06□□□□□ -0.8
TGFBR3-210ENST00000533089 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.05□□□□□ -0.8
TGFBR3-210ENST00000533089 HNRNPUL2Q1KMD3 747 aaKnown RBP10.05□□□□□ -0.8
TGFBR3-210ENST00000533089 SCAF1Q9H7N4 1312 aaKnown RBP10.03□□□□□ -0.8
TGFBR3-210ENST00000533089 POLR3GLQ9BT43 218 aa10.01□□□□□ -0.81
TGFBR3-210ENST00000533089 DCAF1Q9Y4B6 1507 aa9.99□□□□□ -0.81
TGFBR3-210ENST00000533089 PRKCSHP14314 528 aaPredicted RBP9.99□□□□□ -0.81
TGFBR3-210ENST00000533089 BCANQ96GW7 911 aa9.99□□□□□ -0.81
TGFBR3-210ENST00000533089 SLC4A1APQ9BWU0 796 aaKnown RBP9.97□□□□□ -0.81
TGFBR3-210ENST00000533089 ANP32EQ9BTT0 268 aa9.96□□□□□ -0.82
TGFBR3-210ENST00000533089 ZNF316A6NFI3 1004 aaPredicted RBP9.95□□□□□ -0.82
TGFBR3-210ENST00000533089 DIEXFQ68CQ4 756 aaKnown RBP9.95□□□□□ -0.82
TGFBR3-210ENST00000533089 ITGAEP38570 1179 aa9.94□□□□□ -0.82
TGFBR3-210ENST00000533089 TRIM26Q12899 539 aaPredicted RBP9.9□□□□□ -0.83
TGFBR3-210ENST00000533089 MYO15BQ96JP2 1530 aa9.87□□□□□ -0.83
TGFBR3-210ENST00000533089 CDK11AQ9UQ88 783 aaPredicted RBP9.85□□□□□ -0.83
TGFBR3-210ENST00000533089 NBR1Q14596 966 aa9.82□□□□□ -0.84
TGFBR3-210ENST00000533089 CLSPNQ9HAW4 1339 aa9.82□□□□□ -0.84
TGFBR3-210ENST00000533089 RTN4Q9NQC3 1192 aaKnown RBP9.81□□□□□ -0.84
TGFBR3-210ENST00000533089 NEUROD1Q13562 356 aa9.78□□□□□ -0.84
TGFBR3-210ENST00000533089 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.74□□□□□ -0.85
TGFBR3-210ENST00000533089 FBLN2P98095 1184 aa9.72□□□□□ -0.85
TGFBR3-210ENST00000533089 ANP32AP39687 249 aaKnown RBP9.72□□□□□ -0.85
TGFBR3-210ENST00000533089 PODXL2Q9NZ53 605 aa9.72□□□□□ -0.85
TGFBR3-210ENST00000533089 PLPPR3Q6T4P5 718 aa9.7□□□□□ -0.86
TGFBR3-210ENST00000533089 BAZ1BQ9UIG0 1483 aaKnown RBP9.7□□□□□ -0.86
TGFBR3-210ENST00000533089 BAZ1AQ9NRL2 1556 aaPredicted RBP9.69□□□□□ -0.86
TGFBR3-210ENST00000533089 AMER1Q5JTC6 1135 aaPredicted RBP9.68□□□□□ -0.86
TGFBR3-210ENST00000533089 CCDC136Q96JN2 1154 aa9.67□□□□□ -0.86
TGFBR3-210ENST00000533089 RSF1Q96T23 1441 aaPredicted RBP9.67□□□□□ -0.86
TGFBR3-210ENST00000533089 CDK11BP21127 795 aaKnown RBP9.65□□□□□ -0.87
TGFBR3-210ENST00000533089 TNNT2P45379 298 aaPredicted RBP9.64□□□□□ -0.87
TGFBR3-210ENST00000533089 CSRNP3Q8WYN3 585 aa9.64□□□□□ -0.87
TGFBR3-210ENST00000533089 FAM50AQ14320 339 aaKnown RBP9.64□□□□□ -0.87
TGFBR3-210ENST00000533089 TRIM52Q96A61 297 aa9.63□□□□□ -0.87
TGFBR3-210ENST00000533089 NPM2Q86SE8 214 aaKnown RBP9.63□□□□□ -0.87
TGFBR3-210ENST00000533089 A0A0U1RQG5 324 aaPredicted RBP9.6□□□□□ -0.87
TGFBR3-210ENST00000533089 PKNOX2Q96KN3 472 aa9.6□□□□□ -0.87
TGFBR3-210ENST00000533089 DEKP35659 375 aaKnown RBP9.59□□□□□ -0.87
TGFBR3-210ENST00000533089 FKBP8Q14318 412 aa9.58□□□□□ -0.88
TGFBR3-210ENST00000533089 CECR2Q9BXF3 1484 aa9.58□□□□□ -0.88
TGFBR3-210ENST00000533089 NAP1L5Q96NT1 182 aaPredicted RBP9.58□□□□□ -0.88
TGFBR3-210ENST00000533089 LOC105371045A0A1W2PR82 267 aa9.58□□□□□ -0.88
TGFBR3-210ENST00000533089 SMARCA2P51531 1590 aa9.57□□□□□ -0.88
TGFBR3-210ENST00000533089 ZNF326Q5BKZ1 582 aaKnown RBP9.57□□□□□ -0.88
TGFBR3-210ENST00000533089 ARXQ96QS3 562 aa9.55□□□□□ -0.88
TGFBR3-210ENST00000533089 ZBTB47Q9UFB7 747 aaPredicted RBP9.55□□□□□ -0.88
TGFBR3-210ENST00000533089 ERCC6Q03468 1493 aa9.55□□□□□ -0.88
TGFBR3-210ENST00000533089 VSIG10Q8N0Z9 540 aa9.53□□□□□ -0.88
TGFBR3-210ENST00000533089 ANP32BQ92688 251 aaKnown RBP9.53□□□□□ -0.88
TGFBR3-210ENST00000533089 ERICH6BQ5W0A0 696 aa9.5□□□□□ -0.89
TGFBR3-210ENST00000533089 NEFMP07197 916 aa9.49□□□□□ -0.89
TGFBR3-210ENST00000533089 NCLP19338 710 aaKnown RBP9.48□□□□□ -0.89
TGFBR3-210ENST00000533089 ARID3CA6NKF2 412 aa9.48□□□□□ -0.89
TGFBR3-210ENST00000533089 TULP1O00294 542 aaPredicted RBP9.48□□□□□ -0.89
TGFBR3-210ENST00000533089 PDS5BQ9NTI5 1447 aa9.47□□□□□ -0.89
TGFBR3-210ENST00000533089 ANO8Q9HCE9 1232 aaPredicted RBP9.47□□□□□ -0.89
TGFBR3-210ENST00000533089 NCBP3Q53F19 620 aaKnown RBP9.47□□□□□ -0.89
TGFBR3-210ENST00000533089 A0A0G2JS52 829 aa9.47□□□□□ -0.89
TGFBR3-210ENST00000533089 CHMP7Q8WUX9 453 aaPredicted RBP9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms