RNA–Protein interactions for RNA: ENST00000593832.1

COLGALT1-202, Transcript of collagen beta(1-O)galactosyltransferase 1, humanhuman

TSL 2

Gene COLGALT1, Length 2,941 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLGALT1-202ENST00000593832 NISCHQ9Y2I1 1504 aa28.16■■■□□ 2.1
COLGALT1-202ENST00000593832 CCDC180Q9P1Z9 1646 aa24.24■■□□□ 1.47
COLGALT1-202ENST00000593832 SHROOM4Q9ULL8 1493 aa24.16■■□□□ 1.46
COLGALT1-202ENST00000593832 SUPT5HO00267 1087 aaKnown RBP23.95■■□□□ 1.42
COLGALT1-202ENST00000593832 HRCP23327 699 aa23.82■■□□□ 1.4
COLGALT1-202ENST00000593832 DCAF8L2P0C7V8 631 aa23.77■■□□□ 1.39
COLGALT1-202ENST00000593832 ZCCHC6Q5VYS8 1495 aaKnown RBP23.67■■□□□ 1.38
COLGALT1-202ENST00000593832 MYO15BQ96JP2 1530 aa23.67■■□□□ 1.38
COLGALT1-202ENST00000593832 CHIC1Q5VXU3 224 aa23.58■■□□□ 1.36
COLGALT1-202ENST00000593832 PELP1Q8IZL8 1130 aaKnown RBP23.55■■□□□ 1.36
COLGALT1-202ENST00000593832 PCGF6Q9BYE7 350 aa23.42■■□□□ 1.34
COLGALT1-202ENST00000593832 PPARGC1BQ86YN6 1023 aaKnown RBP23.27■■□□□ 1.32
COLGALT1-202ENST00000593832 ABCC9O60706 1549 aa23.15■■□□□ 1.3
COLGALT1-202ENST00000593832 DCAF1Q9Y4B6 1507 aa23.13■■□□□ 1.29
COLGALT1-202ENST00000593832 LOC105371045A0A1W2PR82 267 aa22.93■■□□□ 1.26
COLGALT1-202ENST00000593832 TRIM26Q12899 539 aaPredicted RBP22.81■■□□□ 1.24
COLGALT1-202ENST00000593832 MYT1Q01538 1121 aa22.78■■□□□ 1.24
COLGALT1-202ENST00000593832 SCRIBQ14160 1630 aa22.72■■□□□ 1.23
COLGALT1-202ENST00000593832 SCAF1Q9H7N4 1312 aaKnown RBP22.7■■□□□ 1.22
COLGALT1-202ENST00000593832 NACADO15069 1562 aa22.57■■□□□ 1.2
COLGALT1-202ENST00000593832 ZEB1P37275 1124 aaPredicted RBP22.52■■□□□ 1.2
COLGALT1-202ENST00000593832 RB1CC1Q8TDY2 1594 aa22.39■■□□□ 1.17
COLGALT1-202ENST00000593832 RSF1Q96T23 1441 aaPredicted RBP22.25■■□□□ 1.15
COLGALT1-202ENST00000593832 TRIM41Q8WV44 630 aa22.23■■□□□ 1.15
COLGALT1-202ENST00000593832 FAM9AQ8IZU1 332 aaPredicted RBP22.11■■□□□ 1.13
COLGALT1-202ENST00000593832 CECR2Q9BXF3 1484 aa22.05■■□□□ 1.12
COLGALT1-202ENST00000593832 UNC13AQ9UPW8 1703 aa22.05■■□□□ 1.12
COLGALT1-202ENST00000593832 PABPN1Q86U42 306 aaKnown RBP eCLIP22.02■■□□□ 1.129e-10■■■■□ 19.5
COLGALT1-202ENST00000593832 EHMT2Q96KQ7 1210 aa21.92■■□□□ 1.1
COLGALT1-202ENST00000593832 MROH2BQ7Z745 1585 aa21.9■■□□□ 1.1
COLGALT1-202ENST00000593832 ACIN1Q9UKV3 1341 aaKnown RBP21.89■■□□□ 1.09
COLGALT1-202ENST00000593832 NEUROD1Q13562 356 aa21.83■■□□□ 1.09
COLGALT1-202ENST00000593832 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.82■■□□□ 1.08
COLGALT1-202ENST00000593832 GTF3C3Q9Y5Q9 886 aa21.79■■□□□ 1.08
COLGALT1-202ENST00000593832 BCL11AQ9H165 835 aa21.77■■□□□ 1.08
COLGALT1-202ENST00000593832 WIZO95785 1651 aa21.77■■□□□ 1.08
COLGALT1-202ENST00000593832 BICRAQ9NZM4 1560 aa21.76■■□□□ 1.07
COLGALT1-202ENST00000593832 CCER1Q8TC90 406 aaPredicted RBP21.75■■□□□ 1.07
COLGALT1-202ENST00000593832 BAZ1AQ9NRL2 1556 aaPredicted RBP21.7■■□□□ 1.06
COLGALT1-202ENST00000593832 DIEXFQ68CQ4 756 aaKnown RBP21.67■■□□□ 1.06
COLGALT1-202ENST00000593832 PRKCSHP14314 528 aaPredicted RBP21.66■■□□□ 1.06
COLGALT1-202ENST00000593832 SMARCA4P51532 1647 aa21.61■■□□□ 1.05
COLGALT1-202ENST00000593832 CENPBP07199 599 aaPredicted RBP21.6■■□□□ 1.05
COLGALT1-202ENST00000593832 EIF4G1Q04637 1599 aaKnown RBP21.54■■□□□ 1.04
COLGALT1-202ENST00000593832 WRNQ14191 1432 aaPredicted RBP eCLIP21.51■■□□□ 1.03
COLGALT1-202ENST00000593832 TTBK1Q5TCY1 1321 aaPredicted RBP21.49■■□□□ 1.03
COLGALT1-202ENST00000593832 CEP162Q5TB80 1403 aa21.38■■□□□ 1.01
COLGALT1-202ENST00000593832 TOP2AP11388 1531 aaKnown RBP21.37■■□□□ 1.01
COLGALT1-202ENST00000593832 ZNF316A6NFI3 1004 aaPredicted RBP21.35■■□□□ 1.01
COLGALT1-202ENST00000593832 CCDC88BA6NC98 1476 aa21.34■■□□□ 1.01
COLGALT1-202ENST00000593832 ABCC8Q09428 1581 aa21.31■■□□□ 1
COLGALT1-202ENST00000593832 TNIKQ9UKE5 1360 aa21.29■■□□□ 1
COLGALT1-202ENST00000593832 SOGA1O94964 1423 aa21.24■□□□□ 0.99
COLGALT1-202ENST00000593832 SMARCA2P51531 1590 aa21.24■□□□□ 0.99
COLGALT1-202ENST00000593832 ATAD2BQ9ULI0 1458 aa21.2■□□□□ 0.98
COLGALT1-202ENST00000593832 YTHDC1Q96MU7 727 aaKnown RBP21.18■□□□□ 0.98
COLGALT1-202ENST00000593832 MIER1Q8N108 512 aa21.16■□□□□ 0.98
COLGALT1-202ENST00000593832 BAZ1BQ9UIG0 1483 aaKnown RBP21.16■□□□□ 0.98
COLGALT1-202ENST00000593832 PEG3Q9GZU2 1588 aa21.14■□□□□ 0.98
COLGALT1-202ENST00000593832 CSRNP3Q8WYN3 585 aa21.14■□□□□ 0.97
COLGALT1-202ENST00000593832 EEA1Q15075 1411 aa21.13■□□□□ 0.97
COLGALT1-202ENST00000593832 RUSC2Q8N2Y8 1516 aa21.12■□□□□ 0.97
COLGALT1-202ENST00000593832 UBTFP17480 764 aaKnown RBP21.09■□□□□ 0.97
COLGALT1-202ENST00000593832 GOLGA3Q08378 1498 aa21.04■□□□□ 0.96
COLGALT1-202ENST00000593832 HNRNPUL2Q1KMD3 747 aaKnown RBP20.99■□□□□ 0.95
COLGALT1-202ENST00000593832 ANP32EQ9BTT0 268 aa20.98■□□□□ 0.95
COLGALT1-202ENST00000593832 NCAPD3P42695 1498 aa20.87■□□□□ 0.93
COLGALT1-202ENST00000593832 CEP164Q9UPV0 1460 aa20.86■□□□□ 0.93
COLGALT1-202ENST00000593832 CLIP1P30622 1438 aa20.85■□□□□ 0.93
COLGALT1-202ENST00000593832 KIF21BO75037 1637 aa20.84■□□□□ 0.93
COLGALT1-202ENST00000593832 VPS8Q8N3P4 1428 aa20.83■□□□□ 0.93
COLGALT1-202ENST00000593832 HMGXB3Q12766 1538 aa20.82■□□□□ 0.92
COLGALT1-202ENST00000593832 CC2D2AQ9P2K1 1620 aa20.79■□□□□ 0.92
COLGALT1-202ENST00000593832 ERICH6Q7L0X2 663 aa20.77■□□□□ 0.91
COLGALT1-202ENST00000593832 SYNJ1O43426 1573 aa20.75■□□□□ 0.91
COLGALT1-202ENST00000593832 CLSPNQ9HAW4 1339 aa20.74■□□□□ 0.91
COLGALT1-202ENST00000593832 SUPT16HQ9Y5B9 1047 aaKnown RBP20.73■□□□□ 0.91
COLGALT1-202ENST00000593832 APLP2Q06481 763 aa20.7■□□□□ 0.9
COLGALT1-202ENST00000593832 DHX57Q6P158 1386 aaKnown RBP20.68■□□□□ 0.9
COLGALT1-202ENST00000593832 RAPGEF2Q9Y4G8 1499 aa20.68■□□□□ 0.9
COLGALT1-202ENST00000593832 TSHZ2Q9NRE2 1034 aa20.56■□□□□ 0.88
COLGALT1-202ENST00000593832 RANGAP1P46060 587 aaPredicted RBP20.55■□□□□ 0.88
COLGALT1-202ENST00000593832 CFTRP13569 1480 aa20.53■□□□□ 0.88
COLGALT1-202ENST00000593832 ANO8Q9HCE9 1232 aaPredicted RBP20.5■□□□□ 0.87
COLGALT1-202ENST00000593832 DNAJC5BQ9UF47 199 aa20.5■□□□□ 0.87
COLGALT1-202ENST00000593832 KANK4Q5T7N3 995 aaPredicted RBP20.47■□□□□ 0.87
COLGALT1-202ENST00000593832 CADPSQ9ULU8 1353 aa20.46■□□□□ 0.87
COLGALT1-202ENST00000593832 ARAP1Q96P48 1450 aa20.46■□□□□ 0.87
COLGALT1-202ENST00000593832 TOP2BQ02880 1626 aa20.45■□□□□ 0.86
COLGALT1-202ENST00000593832 RRBP1Q9P2E9 1410 aaKnown RBP20.45■□□□□ 0.86
COLGALT1-202ENST00000593832 CUX2O14529 1486 aa20.43■□□□□ 0.86
COLGALT1-202ENST00000593832 CUX1P39880 1505 aa20.42■□□□□ 0.86
COLGALT1-202ENST00000593832 ERICH3Q5RHP9 1530 aa20.41■□□□□ 0.86
COLGALT1-202ENST00000593832 PRXQ9BXM0 1461 aa20.4■□□□□ 0.86
COLGALT1-202ENST00000593832 NESP48681 1621 aa20.4■□□□□ 0.86
COLGALT1-202ENST00000593832 KCNH8Q96L42 1107 aa20.39■□□□□ 0.85
COLGALT1-202ENST00000593832 BIVM-ERCC5R4GMW8 1640 aa20.38■□□□□ 0.85
COLGALT1-202ENST00000593832 PRDM2Q13029 1718 aa20.36■□□□□ 0.85
COLGALT1-202ENST00000593832 CCNB3Q8WWL7 1395 aa20.31■□□□□ 0.84
COLGALT1-202ENST00000593832 FANCD2Q9BXW9 1451 aa20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms