RNA–Protein interactions for RNA: ENST00000252809.3

GDF15-201, Transcript of growth differentiation factor 15, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GDF15, Length 1,200 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDF15-201ENST00000252809 NISCHQ9Y2I1 1504 aa48.57■■■■■ 5.37
GDF15-201ENST00000252809 CCDC180Q9P1Z9 1646 aa43.11■■■■■ 4.49
GDF15-201ENST00000252809 ABCC9O60706 1549 aa41.62■■■■■ 4.25
GDF15-201ENST00000252809 ZCCHC6Q5VYS8 1495 aaKnown RBP40.58■■■■■ 4.09
GDF15-201ENST00000252809 NACADO15069 1562 aa40.4■■■■■ 4.06
GDF15-201ENST00000252809 RB1CC1Q8TDY2 1594 aa40.34■■■■■ 4.05
GDF15-201ENST00000252809 MYO15BQ96JP2 1530 aa40.32■■■■■ 4.05
GDF15-201ENST00000252809 DCAF8L2P0C7V8 631 aa40.29■■■■■ 4.04
GDF15-201ENST00000252809 DCAF1Q9Y4B6 1507 aa40.29■■■■■ 4.04
GDF15-201ENST00000252809 UNC13AQ9UPW8 1703 aa39.34■■■■□ 3.89
GDF15-201ENST00000252809 SCRIBQ14160 1630 aa39.27■■■■□ 3.88
GDF15-201ENST00000252809 BICRAQ9NZM4 1560 aa38.99■■■■□ 3.83
GDF15-201ENST00000252809 PABPN1Q86U42 306 aaKnown RBP eCLIP38.87■■■■□ 3.812e-18■□□□□ 10.6
GDF15-201ENST00000252809 SHROOM4Q9ULL8 1493 aa38.83■■■■□ 3.81
GDF15-201ENST00000252809 EIF4G1Q04637 1599 aaKnown RBP37.99■■■■□ 3.67
GDF15-201ENST00000252809 CC2D2AQ9P2K1 1620 aa37.71■■■■□ 3.63
GDF15-201ENST00000252809 BAZ1AQ9NRL2 1556 aaPredicted RBP37.69■■■■□ 3.62
GDF15-201ENST00000252809 CECR2Q9BXF3 1484 aa37.69■■■■□ 3.62
GDF15-201ENST00000252809 DNAJC5BQ9UF47 199 aa37.63■■■■□ 3.61
GDF15-201ENST00000252809 SMARCA4P51532 1647 aa37.62■■■■□ 3.61
GDF15-201ENST00000252809 MROH2BQ7Z745 1585 aa37.38■■■■□ 3.58
GDF15-201ENST00000252809 SMARCA2P51531 1590 aa37.34■■■■□ 3.57
GDF15-201ENST00000252809 ATAD2BQ9ULI0 1458 aa37.28■■■■□ 3.56
GDF15-201ENST00000252809 PEG3Q9GZU2 1588 aa37.28■■■■□ 3.56
GDF15-201ENST00000252809 NCAPD3P42695 1498 aa37.2■■■■□ 3.55
GDF15-201ENST00000252809 HMGXB3Q12766 1538 aa37.14■■■■□ 3.54
GDF15-201ENST00000252809 RSF1Q96T23 1441 aaPredicted RBP37.12■■■■□ 3.53
GDF15-201ENST00000252809 BAZ1BQ9UIG0 1483 aaKnown RBP37.05■■■■□ 3.52
GDF15-201ENST00000252809 WIZO95785 1651 aa37.02■■■■□ 3.52
GDF15-201ENST00000252809 TOP2AP11388 1531 aaKnown RBP36.74■■■■□ 3.47
GDF15-201ENST00000252809 SUPT5HO00267 1087 aaKnown RBP36.42■■■■□ 3.42
GDF15-201ENST00000252809 LAMC3Q9Y6N6 1575 aa36.23■■■■□ 3.39
GDF15-201ENST00000252809 CCDC88BA6NC98 1476 aa36.21■■■■□ 3.39
GDF15-201ENST00000252809 CADPSQ9ULU8 1353 aa36.14■■■■□ 3.38
GDF15-201ENST00000252809 NESP48681 1621 aa36.09■■■■□ 3.37
GDF15-201ENST00000252809 CFTRP13569 1480 aa36.03■■■■□ 3.36
GDF15-201ENST00000252809 PDS5BQ9NTI5 1447 aa35.95■■■■□ 3.35
GDF15-201ENST00000252809 ERCC6Q03468 1493 aa35.93■■■■□ 3.34
GDF15-201ENST00000252809 PRDM2Q13029 1718 aa35.88■■■■□ 3.33
GDF15-201ENST00000252809 KIF21AQ7Z4S6 1674 aa35.76■■■■□ 3.32
GDF15-201ENST00000252809 FANCD2Q9BXW9 1451 aa35.74■■■■□ 3.31
GDF15-201ENST00000252809 CEP164Q9UPV0 1460 aa35.7■■■■□ 3.31
GDF15-201ENST00000252809 THOC2Q8NI27 1593 aaKnown RBP35.57■■■■□ 3.28
GDF15-201ENST00000252809 MRC2Q9UBG0 1479 aa35.54■■■■□ 3.28
GDF15-201ENST00000252809 WDR62O43379 1518 aa35.42■■■■□ 3.26
GDF15-201ENST00000252809 CUX2O14529 1486 aa35.42■■■■□ 3.26
GDF15-201ENST00000252809 ABCC8Q09428 1581 aa35.33■■■■□ 3.25
GDF15-201ENST00000252809 URB2Q14146 1524 aaKnown RBP35.32■■■■□ 3.24
GDF15-201ENST00000252809 DNMBPQ6XZF7 1577 aa35.25■■■■□ 3.23
GDF15-201ENST00000252809 TOPBP1Q92547 1522 aa35.21■■■■□ 3.23
GDF15-201ENST00000252809 CUX1P39880 1505 aa35.07■■■■□ 3.21
GDF15-201ENST00000252809 WRNQ14191 1432 aaPredicted RBP eCLIP35.05■■■■□ 3.2
GDF15-201ENST00000252809 BIVM-ERCC5R4GMW8 1640 aa34.95■■■■□ 3.18
GDF15-201ENST00000252809 POLA1P09884 1462 aaPredicted RBP34.94■■■■□ 3.18
GDF15-201ENST00000252809 TOP2BQ02880 1626 aa34.94■■■■□ 3.18
GDF15-201ENST00000252809 IFT140Q96RY7 1462 aa34.93■■■■□ 3.18
GDF15-201ENST00000252809 FGD5Q6ZNL6 1462 aa34.91■■■■□ 3.18
GDF15-201ENST00000252809 SYNJ1O43426 1573 aa34.9■■■■□ 3.18
GDF15-201ENST00000252809 TARBP1Q13395 1621 aaKnown RBP34.78■■■■□ 3.16
GDF15-201ENST00000252809 SOGA1O94964 1423 aa34.78■■■■□ 3.16
GDF15-201ENST00000252809 RAD54L2Q9Y4B4 1467 aa34.71■■■■□ 3.15
GDF15-201ENST00000252809 WDR97A6NE52 1622 aa34.69■■■■□ 3.14
GDF15-201ENST00000252809 ABCA10Q8WWZ4 1543 aa34.63■■■■□ 3.13
GDF15-201ENST00000252809 ZNF608Q9ULD9 1512 aaPredicted RBP34.62■■■■□ 3.13
GDF15-201ENST00000252809 EIF4G3O43432 1585 aaKnown RBP34.62■■■■□ 3.13
GDF15-201ENST00000252809 TDRD9Q8NDG6 1382 aaKnown RBP34.48■■■■□ 3.11
GDF15-201ENST00000252809 AQRO60306 1485 aaKnown RBP eCLIP34.47■■■■□ 3.114e-12■■■■■ 34.9
GDF15-201ENST00000252809 ABCA5Q8WWZ7 1642 aa34.46■■■■□ 3.11
GDF15-201ENST00000252809 TRIM41Q8WV44 630 aa34.46■■■■□ 3.11
GDF15-201ENST00000252809 GAPVD1Q14C86 1478 aa34.42■■■■□ 3.1
GDF15-201ENST00000252809 GRIN2BQ13224 1484 aa34.38■■■■□ 3.09
GDF15-201ENST00000252809 PBRM1Q86U86 1689 aa34.36■■■■□ 3.09
GDF15-201ENST00000252809 KIF27Q86VH2 1401 aa34.31■■■■□ 3.08
GDF15-201ENST00000252809 MAGI1Q96QZ7 1491 aaPredicted RBP34.28■■■■□ 3.08
GDF15-201ENST00000252809 SNAPC4Q5SXM2 1469 aa34.26■■■■□ 3.07
GDF15-201ENST00000252809 ERICH3Q5RHP9 1530 aa34.25■■■■□ 3.07
GDF15-201ENST00000252809 CHIC1Q5VXU3 224 aa34.23■■■■□ 3.07
GDF15-201ENST00000252809 ADAMTS12P58397 1594 aa34.11■■■■□ 3.05
GDF15-201ENST00000252809 SYNJ2O15056 1496 aa34.11■■■■□ 3.05
GDF15-201ENST00000252809 CHD1O14646 1710 aa34.07■■■■□ 3.04
GDF15-201ENST00000252809 CUL7Q14999 1698 aa34.06■■■■□ 3.04
GDF15-201ENST00000252809 FHAD1B1AJZ9 1412 aa34.06■■■■□ 3.04
GDF15-201ENST00000252809 CHMP7Q8WUX9 453 aaPredicted RBP34.01■■■■□ 3.03
GDF15-201ENST00000252809 IGF1RP08069 1367 aa34■■■■□ 3.03
GDF15-201ENST00000252809 EEA1Q15075 1411 aa33.99■■■■□ 3.03
GDF15-201ENST00000252809 FBLN2P98095 1184 aa33.99■■■■□ 3.03
GDF15-201ENST00000252809 RUSC2Q8N2Y8 1516 aa33.95■■■■□ 3.03
GDF15-201ENST00000252809 OSCARQ8IYS5 282 aa33.93■■■■□ 3.02
GDF15-201ENST00000252809 GRIN2AQ12879 1464 aa33.93■■■■□ 3.02
GDF15-201ENST00000252809 CARMIL1Q5VZK9 1371 aa33.86■■■■□ 3.01
GDF15-201ENST00000252809 NUP160Q12769 1436 aa33.76■■■□□ 2.99
GDF15-201ENST00000252809 RAPGEF2Q9Y4G8 1499 aa33.76■■■□□ 2.99
GDF15-201ENST00000252809 CSRNP3Q8WYN3 585 aa33.73■■■□□ 2.99
GDF15-201ENST00000252809 PRXQ9BXM0 1461 aa33.71■■■□□ 2.99
GDF15-201ENST00000252809 CLASP1Q7Z460 1538 aa33.71■■■□□ 2.99
GDF15-201ENST00000252809 CEP170Q5SW79 1584 aa33.71■■■□□ 2.99
GDF15-201ENST00000252809 DNAJC5Q9H3Z4 198 aa33.7■■■□□ 2.99
GDF15-201ENST00000252809 FAM9AQ8IZU1 332 aaPredicted RBP33.64■■■□□ 2.98
GDF15-201ENST00000252809 KIF21BO75037 1637 aa33.57■■■□□ 2.97
GDF15-201ENST00000252809 KIAA0586Q9BVV6 1533 aa33.53■■■□□ 2.96
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms