RNA–Protein interactions for RNA: ENST00000414276.6

APH1A-204, Transcript of aph-1 homolog A, gamma-secretase subunit, humanhuman

TSL 2 BASIC

Gene APH1A, Length 1,718 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APH1A-204ENST00000414276 NISCHQ9Y2I1 1504 aa37.29■■■■□ 3.56
APH1A-204ENST00000414276 CCDC180Q9P1Z9 1646 aa33.11■■■□□ 2.89
APH1A-204ENST00000414276 ABCC9O60706 1549 aa32.69■■■□□ 2.82
APH1A-204ENST00000414276 RB1CC1Q8TDY2 1594 aa31.3■■■□□ 2.6
APH1A-204ENST00000414276 DCAF8L2P0C7V8 631 aa31.29■■■□□ 2.6
APH1A-204ENST00000414276 NACADO15069 1562 aa31.24■■■□□ 2.59
APH1A-204ENST00000414276 MYO15BQ96JP2 1530 aa31.02■■■□□ 2.56
APH1A-204ENST00000414276 ZCCHC6Q5VYS8 1495 aaKnown RBP31.01■■■□□ 2.56
APH1A-204ENST00000414276 DCAF1Q9Y4B6 1507 aa30.82■■■□□ 2.52
APH1A-204ENST00000414276 PABPN1Q86U42 306 aaKnown RBP eCLIP30.59■■■□□ 2.49
APH1A-204ENST00000414276 UNC13AQ9UPW8 1703 aa30.54■■■□□ 2.48
APH1A-204ENST00000414276 BICRAQ9NZM4 1560 aa30.42■■■□□ 2.46
APH1A-204ENST00000414276 DNAJC5BQ9UF47 199 aa30.29■■■□□ 2.44
APH1A-204ENST00000414276 SCRIBQ14160 1630 aa30.25■■■□□ 2.43
APH1A-204ENST00000414276 SHROOM4Q9ULL8 1493 aa30.02■■■□□ 2.4
APH1A-204ENST00000414276 EIF4G1Q04637 1599 aaKnown RBP29.61■■■□□ 2.33
APH1A-204ENST00000414276 CC2D2AQ9P2K1 1620 aa29.52■■■□□ 2.32
APH1A-204ENST00000414276 CECR2Q9BXF3 1484 aa29.38■■■□□ 2.29
APH1A-204ENST00000414276 SMARCA4P51532 1647 aa28.93■■■□□ 2.22
APH1A-204ENST00000414276 NCAPD3P42695 1498 aa28.9■■■□□ 2.22
APH1A-204ENST00000414276 ATAD2BQ9ULI0 1458 aa28.88■■■□□ 2.21
APH1A-204ENST00000414276 BAZ1AQ9NRL2 1556 aaPredicted RBP28.88■■■□□ 2.21
APH1A-204ENST00000414276 SMARCA2P51531 1590 aa28.77■■■□□ 2.2
APH1A-204ENST00000414276 MROH2BQ7Z745 1585 aa28.76■■■□□ 2.19
APH1A-204ENST00000414276 PEG3Q9GZU2 1588 aa28.67■■■□□ 2.18
APH1A-204ENST00000414276 HMGXB3Q12766 1538 aa28.67■■■□□ 2.18
APH1A-204ENST00000414276 BAZ1BQ9UIG0 1483 aaKnown RBP28.58■■■□□ 2.17
APH1A-204ENST00000414276 SUPT5HO00267 1087 aaKnown RBP28.54■■■□□ 2.16
APH1A-204ENST00000414276 RSF1Q96T23 1441 aaPredicted RBP28.39■■■□□ 2.14
APH1A-204ENST00000414276 WIZO95785 1651 aa28.39■■■□□ 2.14
APH1A-204ENST00000414276 NESP48681 1621 aa28.25■■■□□ 2.11
APH1A-204ENST00000414276 ERCC6Q03468 1493 aa28.14■■■□□ 2.1
APH1A-204ENST00000414276 LAMC3Q9Y6N6 1575 aa28.09■■■□□ 2.09
APH1A-204ENST00000414276 TOP2AP11388 1531 aaKnown RBP28.06■■■□□ 2.08
APH1A-204ENST00000414276 CADPSQ9ULU8 1353 aa28.05■■■□□ 2.08
APH1A-204ENST00000414276 PDS5BQ9NTI5 1447 aa27.95■■■□□ 2.06
APH1A-204ENST00000414276 CUX2O14529 1486 aa27.91■■■□□ 2.06
APH1A-204ENST00000414276 CFTRP13569 1480 aa27.84■■■□□ 2.05
APH1A-204ENST00000414276 KIF21AQ7Z4S6 1674 aa27.81■■■□□ 2.04
APH1A-204ENST00000414276 CCDC88BA6NC98 1476 aa27.8■■■□□ 2.04
APH1A-204ENST00000414276 THOC2Q8NI27 1593 aaKnown RBP27.79■■■□□ 2.04
APH1A-204ENST00000414276 CHIC1Q5VXU3 224 aa27.73■■■□□ 2.03
APH1A-204ENST00000414276 FANCD2Q9BXW9 1451 aa27.7■■■□□ 2.02
APH1A-204ENST00000414276 CEP164Q9UPV0 1460 aa27.65■■■□□ 2.02
APH1A-204ENST00000414276 MRC2Q9UBG0 1479 aa27.65■■■□□ 2.02
APH1A-204ENST00000414276 WDR62O43379 1518 aa27.56■■■□□ 2
APH1A-204ENST00000414276 URB2Q14146 1524 aaKnown RBP27.44■■□□□ 1.98
APH1A-204ENST00000414276 PRDM2Q13029 1718 aa27.43■■□□□ 1.98
APH1A-204ENST00000414276 DNAJC5Q9H3Z4 198 aa27.38■■□□□ 1.97
APH1A-204ENST00000414276 TOPBP1Q92547 1522 aa27.23■■□□□ 1.95
APH1A-204ENST00000414276 ABCC8Q09428 1581 aa27.19■■□□□ 1.94
APH1A-204ENST00000414276 DNMBPQ6XZF7 1577 aa27.13■■□□□ 1.93
APH1A-204ENST00000414276 IFT140Q96RY7 1462 aa27.09■■□□□ 1.93
APH1A-204ENST00000414276 ZNF608Q9ULD9 1512 aaPredicted RBP27.03■■□□□ 1.92
APH1A-204ENST00000414276 POLA1P09884 1462 aaPredicted RBP27■■□□□ 1.91
APH1A-204ENST00000414276 CUX1P39880 1505 aa26.97■■□□□ 1.91
APH1A-204ENST00000414276 TARBP1Q13395 1621 aaKnown RBP26.93■■□□□ 1.9
APH1A-204ENST00000414276 RAD54L2Q9Y4B4 1467 aa26.9■■□□□ 1.9
APH1A-204ENST00000414276 SOGA1O94964 1423 aa26.9■■□□□ 1.9
APH1A-204ENST00000414276 FGD5Q6ZNL6 1462 aa26.89■■□□□ 1.9
APH1A-204ENST00000414276 AQRO60306 1485 aaKnown RBP eCLIP26.87■■□□□ 1.89
APH1A-204ENST00000414276 EIF4G3O43432 1585 aaKnown RBP26.83■■□□□ 1.89
APH1A-204ENST00000414276 OSCARQ8IYS5 282 aa26.82■■□□□ 1.88
APH1A-204ENST00000414276 TRIM41Q8WV44 630 aa26.81■■□□□ 1.88
APH1A-204ENST00000414276 TDRD9Q8NDG6 1382 aaKnown RBP26.81■■□□□ 1.88
APH1A-204ENST00000414276 WRNQ14191 1432 aaPredicted RBP eCLIP26.74■■□□□ 1.87
APH1A-204ENST00000414276 LOC105371045A0A1W2PR82 267 aa26.66■■□□□ 1.86
APH1A-204ENST00000414276 TOP2BQ02880 1626 aa26.65■■□□□ 1.86
APH1A-204ENST00000414276 SYNJ1O43426 1573 aa26.65■■□□□ 1.86
APH1A-204ENST00000414276 WDR97A6NE52 1622 aa26.64■■□□□ 1.85
APH1A-204ENST00000414276 ABCA10Q8WWZ4 1543 aa26.63■■□□□ 1.85
APH1A-204ENST00000414276 BIVM-ERCC5R4GMW8 1640 aa26.62■■□□□ 1.85
APH1A-204ENST00000414276 FBLN2P98095 1184 aa26.58■■□□□ 1.85
APH1A-204ENST00000414276 GRIN2BQ13224 1484 aa26.57■■□□□ 1.84
APH1A-204ENST00000414276 GAPVD1Q14C86 1478 aa26.57■■□□□ 1.84
APH1A-204ENST00000414276 SNAPC4Q5SXM2 1469 aa26.56■■□□□ 1.84
APH1A-204ENST00000414276 MAGI1Q96QZ7 1491 aaPredicted RBP26.51■■□□□ 1.83
APH1A-204ENST00000414276 ABCA5Q8WWZ7 1642 aa26.5■■□□□ 1.83
APH1A-204ENST00000414276 CHD1O14646 1710 aa26.49■■□□□ 1.83
APH1A-204ENST00000414276 CHMP7Q8WUX9 453 aaPredicted RBP26.48■■□□□ 1.83
APH1A-204ENST00000414276 SYNJ2O15056 1496 aa26.43■■□□□ 1.82
APH1A-204ENST00000414276 PBRM1Q86U86 1689 aa26.41■■□□□ 1.82
APH1A-204ENST00000414276 ARHGEF11O15085 1522 aa26.32■■□□□ 1.8
APH1A-204ENST00000414276 RIMBP3CA6NJZ7 1639 aa26.31■■□□□ 1.8
APH1A-204ENST00000414276 RIMBP3BA6NNM3 1639 aa26.31■■□□□ 1.8
APH1A-204ENST00000414276 RIMBP3Q9UFD9 1639 aa26.31■■□□□ 1.8
APH1A-204ENST00000414276 FAM9AQ8IZU1 332 aaPredicted RBP26.3■■□□□ 1.8
APH1A-204ENST00000414276 ERICH3Q5RHP9 1530 aa26.28■■□□□ 1.8
APH1A-204ENST00000414276 CLASP1Q7Z460 1538 aa26.26■■□□□ 1.79
APH1A-204ENST00000414276 FHAD1B1AJZ9 1412 aa26.25■■□□□ 1.79
APH1A-204ENST00000414276 ADAMTS12P58397 1594 aa26.24■■□□□ 1.79
APH1A-204ENST00000414276 GRIN2AQ12879 1464 aa26.23■■□□□ 1.79
APH1A-204ENST00000414276 PCGF6Q9BYE7 350 aa26.21■■□□□ 1.79
APH1A-204ENST00000414276 KIF27Q86VH2 1401 aa26.18■■□□□ 1.78
APH1A-204ENST00000414276 IGF1RP08069 1367 aa26.17■■□□□ 1.78
APH1A-204ENST00000414276 CYB5RLQ6IPT4 315 aa26.17■■□□□ 1.78
APH1A-204ENST00000414276 NUP160Q12769 1436 aa26.15■■□□□ 1.78
APH1A-204ENST00000414276 EEA1Q15075 1411 aa26.12■■□□□ 1.77
APH1A-204ENST00000414276 ARAP1Q96P48 1450 aa26.11■■□□□ 1.77
APH1A-204ENST00000414276 CEP170Q5SW79 1584 aa26.1■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms