RNA–Protein interactions for RNA: ENST00000360244.8

APH1A-202, Transcript of aph-1 homolog A, gamma-secretase subunit, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene APH1A, Length 2,353 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APH1A-202ENST00000360244 NISCHQ9Y2I1 1504 aa34.73■■■■□ 3.15
APH1A-202ENST00000360244 SHROOM4Q9ULL8 1493 aa30.27■■■□□ 2.44
APH1A-202ENST00000360244 HRCP23327 699 aa30.1■■■□□ 2.41
APH1A-202ENST00000360244 SUPT5HO00267 1087 aaKnown RBP30.05■■■□□ 2.4
APH1A-202ENST00000360244 MYO15BQ96JP2 1530 aa29.74■■■□□ 2.35
APH1A-202ENST00000360244 CHIC1Q5VXU3 224 aa29.59■■■□□ 2.33
APH1A-202ENST00000360244 ZCCHC6Q5VYS8 1495 aaKnown RBP29.54■■■□□ 2.32
APH1A-202ENST00000360244 PCGF6Q9BYE7 350 aa29.53■■■□□ 2.32
APH1A-202ENST00000360244 PPARGC1BQ86YN6 1023 aaKnown RBP29.36■■■□□ 2.29
APH1A-202ENST00000360244 DCAF1Q9Y4B6 1507 aa29.16■■■□□ 2.26
APH1A-202ENST00000360244 CCDC180Q9P1Z9 1646 aa29.11■■■□□ 2.25
APH1A-202ENST00000360244 LOC105371045A0A1W2PR82 267 aa28.78■■■□□ 2.2
APH1A-202ENST00000360244 TRIM26Q12899 539 aaPredicted RBP28.75■■■□□ 2.19
APH1A-202ENST00000360244 PELP1Q8IZL8 1130 aaKnown RBP28.65■■■□□ 2.18
APH1A-202ENST00000360244 DCAF8L2P0C7V8 631 aa28.62■■■□□ 2.17
APH1A-202ENST00000360244 ZEB1P37275 1124 aaPredicted RBP28.47■■■□□ 2.15
APH1A-202ENST00000360244 SCAF1Q9H7N4 1312 aaKnown RBP28.26■■■□□ 2.11
APH1A-202ENST00000360244 ABCC9O60706 1549 aa28.05■■■□□ 2.08
APH1A-202ENST00000360244 TRIM41Q8WV44 630 aa27.91■■■□□ 2.06
APH1A-202ENST00000360244 RSF1Q96T23 1441 aaPredicted RBP27.82■■■□□ 2.04
APH1A-202ENST00000360244 FAM9AQ8IZU1 332 aaPredicted RBP27.74■■■□□ 2.03
APH1A-202ENST00000360244 ACIN1Q9UKV3 1341 aaKnown RBP27.69■■■□□ 2.02
APH1A-202ENST00000360244 RB1CC1Q8TDY2 1594 aa27.68■■■□□ 2.02
APH1A-202ENST00000360244 NEUROD1Q13562 356 aa27.59■■■□□ 2.01
APH1A-202ENST00000360244 EHMT2Q96KQ7 1210 aa27.52■■■□□ 2
APH1A-202ENST00000360244 SCRIBQ14160 1630 aa27.5■■□□□ 1.99
APH1A-202ENST00000360244 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.46■■□□□ 1.99
APH1A-202ENST00000360244 MYT1Q01538 1121 aa27.46■■□□□ 1.99
APH1A-202ENST00000360244 CCER1Q8TC90 406 aaPredicted RBP27.43■■□□□ 1.98
APH1A-202ENST00000360244 GTF3C3Q9Y5Q9 886 aa27.41■■□□□ 1.98
APH1A-202ENST00000360244 CENPBP07199 599 aaPredicted RBP27.39■■□□□ 1.98
APH1A-202ENST00000360244 DIEXFQ68CQ4 756 aaKnown RBP27.36■■□□□ 1.97
APH1A-202ENST00000360244 CECR2Q9BXF3 1484 aa27.08■■□□□ 1.93
APH1A-202ENST00000360244 MROH2BQ7Z745 1585 aa27.07■■□□□ 1.92
APH1A-202ENST00000360244 WRNQ14191 1432 aaPredicted RBP eCLIP27.02■■□□□ 1.92
APH1A-202ENST00000360244 WIZO95785 1651 aa26.99■■□□□ 1.91
APH1A-202ENST00000360244 EIF4G1Q04637 1599 aaKnown RBP26.97■■□□□ 1.91
APH1A-202ENST00000360244 ZNF316A6NFI3 1004 aaPredicted RBP26.93■■□□□ 1.9
APH1A-202ENST00000360244 BAZ1AQ9NRL2 1556 aaPredicted RBP26.86■■□□□ 1.89
APH1A-202ENST00000360244 TTBK1Q5TCY1 1321 aaPredicted RBP26.86■■□□□ 1.89
APH1A-202ENST00000360244 CEP162Q5TB80 1403 aa26.84■■□□□ 1.89
APH1A-202ENST00000360244 YTHDC1Q96MU7 727 aaKnown RBP26.78■■□□□ 1.88
APH1A-202ENST00000360244 NACADO15069 1562 aa26.73■■□□□ 1.87
APH1A-202ENST00000360244 TNIKQ9UKE5 1360 aa26.72■■□□□ 1.87
APH1A-202ENST00000360244 CCDC88BA6NC98 1476 aa26.72■■□□□ 1.87
APH1A-202ENST00000360244 ABCC8Q09428 1581 aa26.69■■□□□ 1.86
APH1A-202ENST00000360244 MIER1Q8N108 512 aa26.66■■□□□ 1.86
APH1A-202ENST00000360244 SOGA1O94964 1423 aa26.59■■□□□ 1.85
APH1A-202ENST00000360244 EEA1Q15075 1411 aa26.53■■□□□ 1.84
APH1A-202ENST00000360244 TOP2AP11388 1531 aaKnown RBP26.53■■□□□ 1.84
APH1A-202ENST00000360244 CSRNP3Q8WYN3 585 aa26.48■■□□□ 1.83
APH1A-202ENST00000360244 UBTFP17480 764 aaKnown RBP26.47■■□□□ 1.83
APH1A-202ENST00000360244 SMARCA2P51531 1590 aa26.43■■□□□ 1.82
APH1A-202ENST00000360244 GOLGA3Q08378 1498 aa26.42■■□□□ 1.82
APH1A-202ENST00000360244 RUSC2Q8N2Y8 1516 aa26.42■■□□□ 1.82
APH1A-202ENST00000360244 HNRNPUL2Q1KMD3 747 aaKnown RBP26.39■■□□□ 1.81
APH1A-202ENST00000360244 SMARCA4P51532 1647 aa26.29■■□□□ 1.8
APH1A-202ENST00000360244 CLSPNQ9HAW4 1339 aa26.29■■□□□ 1.8
APH1A-202ENST00000360244 SUPT16HQ9Y5B9 1047 aaKnown RBP26.2■■□□□ 1.78
APH1A-202ENST00000360244 CEP164Q9UPV0 1460 aa26.18■■□□□ 1.78
APH1A-202ENST00000360244 KIF21BO75037 1637 aa26.16■■□□□ 1.78
APH1A-202ENST00000360244 CLIP1P30622 1438 aa26.16■■□□□ 1.78
APH1A-202ENST00000360244 VPS8Q8N3P4 1428 aa26.15■■□□□ 1.78
APH1A-202ENST00000360244 APLP2Q06481 763 aa26.04■■□□□ 1.76
APH1A-202ENST00000360244 BAZ1BQ9UIG0 1483 aaKnown RBP26■■□□□ 1.75
APH1A-202ENST00000360244 TSHZ2Q9NRE2 1034 aa26■■□□□ 1.75
APH1A-202ENST00000360244 DHX57Q6P158 1386 aaKnown RBP26■■□□□ 1.75
APH1A-202ENST00000360244 SYNJ1O43426 1573 aa25.97■■□□□ 1.75
APH1A-202ENST00000360244 ANP32EQ9BTT0 268 aa25.93■■□□□ 1.74
APH1A-202ENST00000360244 RAPGEF2Q9Y4G8 1499 aa25.9■■□□□ 1.74
APH1A-202ENST00000360244 UNC13AQ9UPW8 1703 aa25.84■■□□□ 1.73
APH1A-202ENST00000360244 RANGAP1P46060 587 aaPredicted RBP25.76■■□□□ 1.71
APH1A-202ENST00000360244 PEG3Q9GZU2 1588 aa25.72■■□□□ 1.71
APH1A-202ENST00000360244 RRBP1Q9P2E9 1410 aaKnown RBP25.67■■□□□ 1.7
APH1A-202ENST00000360244 CUX2O14529 1486 aa25.67■■□□□ 1.7
APH1A-202ENST00000360244 ARAP1Q96P48 1450 aa25.66■■□□□ 1.7
APH1A-202ENST00000360244 KANK4Q5T7N3 995 aaPredicted RBP25.64■■□□□ 1.7
APH1A-202ENST00000360244 KCNH8Q96L42 1107 aa25.64■■□□□ 1.7
APH1A-202ENST00000360244 BCL11AQ9H165 835 aa25.63■■□□□ 1.69
APH1A-202ENST00000360244 ERICH3Q5RHP9 1530 aa25.59■■□□□ 1.69
APH1A-202ENST00000360244 BCANQ96GW7 911 aa25.56■■□□□ 1.68
APH1A-202ENST00000360244 TOP2BQ02880 1626 aa25.56■■□□□ 1.68
APH1A-202ENST00000360244 PRXQ9BXM0 1461 aa25.53■■□□□ 1.68
APH1A-202ENST00000360244 FKBP8Q14318 412 aa25.53■■□□□ 1.68
APH1A-202ENST00000360244 CCNB3Q8WWL7 1395 aa25.51■■□□□ 1.67
APH1A-202ENST00000360244 MAPKBP1O60336 1514 aa25.46■■□□□ 1.67
APH1A-202ENST00000360244 BICRAQ9NZM4 1560 aa25.45■■□□□ 1.66
APH1A-202ENST00000360244 BIVM-ERCC5R4GMW8 1640 aa25.44■■□□□ 1.66
APH1A-202ENST00000360244 ATAD2BQ9ULI0 1458 aa25.42■■□□□ 1.66
APH1A-202ENST00000360244 RBM19Q9Y4C8 960 aaKnown RBP25.41■■□□□ 1.66
APH1A-202ENST00000360244 RAB3GAP2Q9H2M9 1393 aa25.41■■□□□ 1.66
APH1A-202ENST00000360244 PABPN1Q86U42 306 aaKnown RBP eCLIP25.4■■□□□ 1.66
APH1A-202ENST00000360244 ITGAEP38570 1179 aa25.37■■□□□ 1.65
APH1A-202ENST00000360244 DDX10Q13206 875 aaKnown RBP25.37■■□□□ 1.65
APH1A-202ENST00000360244 NEFLP07196 543 aa25.36■■□□□ 1.65
APH1A-202ENST00000360244 WDR97A6NE52 1622 aa25.33■■□□□ 1.65
APH1A-202ENST00000360244 PPP1R15AO75807 674 aaPredicted RBP25.3■■□□□ 1.64
APH1A-202ENST00000360244 ARHGAP35Q9NRY4 1499 aa25.3■■□□□ 1.64
APH1A-202ENST00000360244 SETD5Q9C0A6 1442 aa25.26■■□□□ 1.63
APH1A-202ENST00000360244 CCER2I3L3R5 266 aa25.25■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms