RNA–Protein interactions for RNA: ENST00000378247.7

SPIRE2-201, Transcript of spire type actin nucleation factor 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SPIRE2, Length 3,235 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE2-201ENST00000378247 NISCHQ9Y2I1 1504 aa36.95■■■■□ 3.51
SPIRE2-201ENST00000378247 SHROOM4Q9ULL8 1493 aa32.68■■■□□ 2.82
SPIRE2-201ENST00000378247 SUPT5HO00267 1087 aaKnown RBP32.45■■■□□ 2.78
SPIRE2-201ENST00000378247 PCGF6Q9BYE7 350 aa31.65■■■□□ 2.66
SPIRE2-201ENST00000378247 DCAF8L2P0C7V8 631 aa31.6■■■□□ 2.65
SPIRE2-201ENST00000378247 HRCP23327 699 aa31.58■■■□□ 2.65
SPIRE2-201ENST00000378247 PPARGC1BQ86YN6 1023 aaKnown RBP31.58■■■□□ 2.65
SPIRE2-201ENST00000378247 CCDC180Q9P1Z9 1646 aa31.37■■■□□ 2.61
SPIRE2-201ENST00000378247 MYO15BQ96JP2 1530 aa31.3■■■□□ 2.6
SPIRE2-201ENST00000378247 CHIC1Q5VXU3 224 aa31.25■■■□□ 2.59
SPIRE2-201ENST00000378247 ZCCHC6Q5VYS8 1495 aaKnown RBP31.08■■■□□ 2.57
SPIRE2-201ENST00000378247 LOC105371045A0A1W2PR82 267 aa30.96■■■□□ 2.55
SPIRE2-201ENST00000378247 EHMT2Q96KQ7 1210 aa30.5■■■□□ 2.47
SPIRE2-201ENST00000378247 TRIM26Q12899 539 aaPredicted RBP30.22■■■□□ 2.43
SPIRE2-201ENST00000378247 FAM9AQ8IZU1 332 aaPredicted RBP30.2■■■□□ 2.43
SPIRE2-201ENST00000378247 DCAF1Q9Y4B6 1507 aa30.09■■■□□ 2.41
SPIRE2-201ENST00000378247 ABCC9O60706 1549 aa30.04■■■□□ 2.4
SPIRE2-201ENST00000378247 SCAF1Q9H7N4 1312 aaKnown RBP29.9■■■□□ 2.38
SPIRE2-201ENST00000378247 TRIM41Q8WV44 630 aa29.71■■■□□ 2.35
SPIRE2-201ENST00000378247 SCRIBQ14160 1630 aa29.7■■■□□ 2.35
SPIRE2-201ENST00000378247 ZEB1P37275 1124 aaPredicted RBP29.6■■■□□ 2.33
SPIRE2-201ENST00000378247 TTBK1Q5TCY1 1321 aaPredicted RBP29.59■■■□□ 2.33
SPIRE2-201ENST00000378247 PELP1Q8IZL8 1130 aaKnown RBP29.5■■■□□ 2.31
SPIRE2-201ENST00000378247 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.49■■■□□ 2.31
SPIRE2-201ENST00000378247 CCER1Q8TC90 406 aaPredicted RBP29.3■■■□□ 2.28
SPIRE2-201ENST00000378247 NACADO15069 1562 aa29.3■■■□□ 2.28
SPIRE2-201ENST00000378247 NEUROD1Q13562 356 aa29.3■■■□□ 2.28
SPIRE2-201ENST00000378247 RSF1Q96T23 1441 aaPredicted RBP29.16■■■□□ 2.26
SPIRE2-201ENST00000378247 GTF3C3Q9Y5Q9 886 aa29.15■■■□□ 2.26
SPIRE2-201ENST00000378247 ACIN1Q9UKV3 1341 aaKnown RBP29.13■■■□□ 2.25
SPIRE2-201ENST00000378247 YTHDC1Q96MU7 727 aaKnown RBP29.02■■■□□ 2.24
SPIRE2-201ENST00000378247 CECR2Q9BXF3 1484 aa29■■■□□ 2.23
SPIRE2-201ENST00000378247 DIEXFQ68CQ4 756 aaKnown RBP29■■■□□ 2.23
SPIRE2-201ENST00000378247 RB1CC1Q8TDY2 1594 aa28.99■■■□□ 2.23
SPIRE2-201ENST00000378247 PABPN1Q86U42 306 aaKnown RBP eCLIP28.82■■■□□ 2.29e-7■■□□□ 12
SPIRE2-201ENST00000378247 CENPBP07199 599 aaPredicted RBP28.81■■■□□ 2.2
SPIRE2-201ENST00000378247 MROH2BQ7Z745 1585 aa28.77■■■□□ 2.2
SPIRE2-201ENST00000378247 WIZO95785 1651 aa28.55■■■□□ 2.16
SPIRE2-201ENST00000378247 HNRNPUL2Q1KMD3 747 aaKnown RBP28.44■■■□□ 2.14
SPIRE2-201ENST00000378247 BAZ1AQ9NRL2 1556 aaPredicted RBP28.42■■■□□ 2.14
SPIRE2-201ENST00000378247 UBTFP17480 764 aaKnown RBP28.41■■■□□ 2.14
SPIRE2-201ENST00000378247 RANGAP1P46060 587 aaPredicted RBP28.39■■■□□ 2.14
SPIRE2-201ENST00000378247 MIER1Q8N108 512 aa28.37■■■□□ 2.13
SPIRE2-201ENST00000378247 ZNF316A6NFI3 1004 aaPredicted RBP28.37■■■□□ 2.13
SPIRE2-201ENST00000378247 UNC13AQ9UPW8 1703 aa28.29■■■□□ 2.12
SPIRE2-201ENST00000378247 SMARCA4P51532 1647 aa28.18■■■□□ 2.1
SPIRE2-201ENST00000378247 CEP162Q5TB80 1403 aa28.1■■■□□ 2.09
SPIRE2-201ENST00000378247 ABCC8Q09428 1581 aa28.1■■■□□ 2.09
SPIRE2-201ENST00000378247 BICRAQ9NZM4 1560 aa28.1■■■□□ 2.09
SPIRE2-201ENST00000378247 CCDC88BA6NC98 1476 aa28.06■■■□□ 2.08
SPIRE2-201ENST00000378247 SOGA1O94964 1423 aa28.05■■■□□ 2.08
SPIRE2-201ENST00000378247 TOP2AP11388 1531 aaKnown RBP28.03■■■□□ 2.08
SPIRE2-201ENST00000378247 MYT1Q01538 1121 aa28.03■■■□□ 2.08
SPIRE2-201ENST00000378247 CSRNP3Q8WYN3 585 aa27.94■■■□□ 2.06
SPIRE2-201ENST00000378247 RUSC2Q8N2Y8 1516 aa27.93■■■□□ 2.06
SPIRE2-201ENST00000378247 SMARCA2P51531 1590 aa27.86■■■□□ 2.05
SPIRE2-201ENST00000378247 APLP2Q06481 763 aa27.79■■■□□ 2.04
SPIRE2-201ENST00000378247 WRNQ14191 1432 aaPredicted RBP eCLIP27.74■■■□□ 2.03
SPIRE2-201ENST00000378247 TNIKQ9UKE5 1360 aa27.73■■■□□ 2.03
SPIRE2-201ENST00000378247 ATAD2BQ9ULI0 1458 aa27.7■■■□□ 2.03
SPIRE2-201ENST00000378247 BCANQ96GW7 911 aa27.69■■■□□ 2.02
SPIRE2-201ENST00000378247 BAZ1BQ9UIG0 1483 aaKnown RBP27.69■■■□□ 2.02
SPIRE2-201ENST00000378247 EIF4G1Q04637 1599 aaKnown RBP27.65■■■□□ 2.02
SPIRE2-201ENST00000378247 ITGAEP38570 1179 aa27.63■■■□□ 2.01
SPIRE2-201ENST00000378247 SUPT16HQ9Y5B9 1047 aaKnown RBP27.63■■■□□ 2.01
SPIRE2-201ENST00000378247 KCNH8Q96L42 1107 aa27.54■■■□□ 2
SPIRE2-201ENST00000378247 PEG3Q9GZU2 1588 aa27.49■■□□□ 1.99
SPIRE2-201ENST00000378247 CLIP1P30622 1438 aa27.44■■□□□ 1.98
SPIRE2-201ENST00000378247 GOLGA3Q08378 1498 aa27.44■■□□□ 1.98
SPIRE2-201ENST00000378247 TSHZ2Q9NRE2 1034 aa27.41■■□□□ 1.98
SPIRE2-201ENST00000378247 KANK4Q5T7N3 995 aaPredicted RBP27.29■■□□□ 1.96
SPIRE2-201ENST00000378247 HIRIP3Q9BW71 556 aaPredicted RBP27.27■■□□□ 1.96
SPIRE2-201ENST00000378247 FKBP8Q14318 412 aa27.23■■□□□ 1.95
SPIRE2-201ENST00000378247 EEA1Q15075 1411 aa27.21■■□□□ 1.95
SPIRE2-201ENST00000378247 SYNJ1O43426 1573 aa27.2■■□□□ 1.94
SPIRE2-201ENST00000378247 DHX57Q6P158 1386 aaKnown RBP27.19■■□□□ 1.94
SPIRE2-201ENST00000378247 VPS8Q8N3P4 1428 aa27.19■■□□□ 1.94
SPIRE2-201ENST00000378247 NCAPD3P42695 1498 aa27.19■■□□□ 1.94
SPIRE2-201ENST00000378247 RAPGEF2Q9Y4G8 1499 aa27.19■■□□□ 1.94
SPIRE2-201ENST00000378247 ANP32EQ9BTT0 268 aa27.18■■□□□ 1.94
SPIRE2-201ENST00000378247 DDX10Q13206 875 aaKnown RBP27.17■■□□□ 1.94
SPIRE2-201ENST00000378247 CEP164Q9UPV0 1460 aa27.14■■□□□ 1.94
SPIRE2-201ENST00000378247 TRIM52Q96A61 297 aa27.11■■□□□ 1.93
SPIRE2-201ENST00000378247 HMGXB3Q12766 1538 aa27.02■■□□□ 1.92
SPIRE2-201ENST00000378247 BCL11AQ9H165 835 aa27.01■■□□□ 1.91
SPIRE2-201ENST00000378247 SIN3AQ96ST3 1273 aa27■■□□□ 1.91
SPIRE2-201ENST00000378247 ATP1B4Q9UN42 357 aaPredicted RBP26.99■■□□□ 1.91
SPIRE2-201ENST00000378247 KIF21BO75037 1637 aa26.94■■□□□ 1.9
SPIRE2-201ENST00000378247 IRX6P78412 446 aaPredicted RBP26.9■■□□□ 1.9
SPIRE2-201ENST00000378247 NEFLP07196 543 aa26.89■■□□□ 1.89
SPIRE2-201ENST00000378247 CLSPNQ9HAW4 1339 aa26.88■■□□□ 1.89
SPIRE2-201ENST00000378247 FAM50AQ14320 339 aaKnown RBP26.87■■□□□ 1.89
SPIRE2-201ENST00000378247 RBM19Q9Y4C8 960 aaKnown RBP26.85■■□□□ 1.89
SPIRE2-201ENST00000378247 CFTRP13569 1480 aa26.85■■□□□ 1.89
SPIRE2-201ENST00000378247 TOP2BQ02880 1626 aa26.84■■□□□ 1.89
SPIRE2-201ENST00000378247 P3H3Q8IVL6 736 aa26.79■■□□□ 1.88
SPIRE2-201ENST00000378247 CADPSQ9ULU8 1353 aa26.79■■□□□ 1.88
SPIRE2-201ENST00000378247 CUX1P39880 1505 aa26.79■■□□□ 1.88
SPIRE2-201ENST00000378247 CC2D2AQ9P2K1 1620 aa26.79■■□□□ 1.88
SPIRE2-201ENST00000378247 RAB3GAP2Q9H2M9 1393 aa26.73■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms