RNA–Protein interactions for RNA: ENST00000588850.5

U2AF2-205, Transcript of U2 small nuclear RNA auxiliary factor 2, humanhuman

TSL 2

Gene U2AF2, Length 637 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF2-205ENST00000588850 NISCHQ9Y2I1 1504 aa37.1■■■■□ 3.53
U2AF2-205ENST00000588850 CCDC180Q9P1Z9 1646 aa32.96■■■□□ 2.87
U2AF2-205ENST00000588850 ABCC9O60706 1549 aa32.8■■■□□ 2.84
U2AF2-205ENST00000588850 RB1CC1Q8TDY2 1594 aa31.17■■■□□ 2.58
U2AF2-205ENST00000588850 DNAJC5BQ9UF47 199 aa31.15■■■□□ 2.58
U2AF2-205ENST00000588850 NACADO15069 1562 aa31.07■■■□□ 2.56
U2AF2-205ENST00000588850 DCAF8L2P0C7V8 631 aa31.01■■■□□ 2.55
U2AF2-205ENST00000588850 ZCCHC6Q5VYS8 1495 aaKnown RBP30.9■■■□□ 2.54
U2AF2-205ENST00000588850 MYO15BQ96JP2 1530 aa30.79■■■□□ 2.52
U2AF2-205ENST00000588850 DCAF1Q9Y4B6 1507 aa30.63■■■□□ 2.49
U2AF2-205ENST00000588850 PABPN1Q86U42 306 aaKnown RBP eCLIP30.54■■■□□ 2.48
U2AF2-205ENST00000588850 UNC13AQ9UPW8 1703 aa30.49■■■□□ 2.47
U2AF2-205ENST00000588850 BICRAQ9NZM4 1560 aa30.29■■■□□ 2.44
U2AF2-205ENST00000588850 SCRIBQ14160 1630 aa30.09■■■□□ 2.41
U2AF2-205ENST00000588850 SHROOM4Q9ULL8 1493 aa29.93■■■□□ 2.38
U2AF2-205ENST00000588850 CC2D2AQ9P2K1 1620 aa29.57■■■□□ 2.32
U2AF2-205ENST00000588850 CECR2Q9BXF3 1484 aa29.57■■■□□ 2.32
U2AF2-205ENST00000588850 EIF4G1Q04637 1599 aaKnown RBP29.49■■■□□ 2.31
U2AF2-205ENST00000588850 DNAJC5Q9H3Z4 198 aa28.82■■■□□ 2.2
U2AF2-205ENST00000588850 SMARCA4P51532 1647 aa28.76■■■□□ 2.19
U2AF2-205ENST00000588850 BAZ1AQ9NRL2 1556 aaPredicted RBP28.69■■■□□ 2.18
U2AF2-205ENST00000588850 NCAPD3P42695 1498 aa28.68■■■□□ 2.18
U2AF2-205ENST00000588850 ATAD2BQ9ULI0 1458 aa28.65■■■□□ 2.18
U2AF2-205ENST00000588850 MROH2BQ7Z745 1585 aa28.63■■■□□ 2.17
U2AF2-205ENST00000588850 SMARCA2P51531 1590 aa28.58■■■□□ 2.17
U2AF2-205ENST00000588850 HMGXB3Q12766 1538 aa28.51■■■□□ 2.15
U2AF2-205ENST00000588850 PEG3Q9GZU2 1588 aa28.45■■■□□ 2.15
U2AF2-205ENST00000588850 CUX2O14529 1486 aa28.37■■■□□ 2.13
U2AF2-205ENST00000588850 BAZ1BQ9UIG0 1483 aaKnown RBP28.37■■■□□ 2.13
U2AF2-205ENST00000588850 ERCC6Q03468 1493 aa28.32■■■□□ 2.12
U2AF2-205ENST00000588850 RSF1Q96T23 1441 aaPredicted RBP28.31■■■□□ 2.12
U2AF2-205ENST00000588850 WIZO95785 1651 aa28.31■■■□□ 2.12
U2AF2-205ENST00000588850 NESP48681 1621 aa28.1■■■□□ 2.09
U2AF2-205ENST00000588850 LAMC3Q9Y6N6 1575 aa27.97■■■□□ 2.07
U2AF2-205ENST00000588850 TOP2AP11388 1531 aaKnown RBP27.96■■■□□ 2.07
U2AF2-205ENST00000588850 CADPSQ9ULU8 1353 aa27.82■■■□□ 2.04
U2AF2-205ENST00000588850 THOC2Q8NI27 1593 aaKnown RBP27.8■■■□□ 2.04
U2AF2-205ENST00000588850 PDS5BQ9NTI5 1447 aa27.78■■■□□ 2.04
U2AF2-205ENST00000588850 KIF21AQ7Z4S6 1674 aa27.75■■■□□ 2.03
U2AF2-205ENST00000588850 CCDC88BA6NC98 1476 aa27.69■■■□□ 2.02
U2AF2-205ENST00000588850 SUPT5HO00267 1087 aaKnown RBP27.63■■■□□ 2.01
U2AF2-205ENST00000588850 CFTRP13569 1480 aa27.6■■■□□ 2.01
U2AF2-205ENST00000588850 MRC2Q9UBG0 1479 aa27.53■■■□□ 2
U2AF2-205ENST00000588850 FANCD2Q9BXW9 1451 aa27.5■■□□□ 1.99
U2AF2-205ENST00000588850 CEP164Q9UPV0 1460 aa27.5■■□□□ 1.99
U2AF2-205ENST00000588850 WDR62O43379 1518 aa27.47■■□□□ 1.99
U2AF2-205ENST00000588850 TRIM41Q8WV44 630 aa27.42■■□□□ 1.98
U2AF2-205ENST00000588850 PRDM2Q13029 1718 aa27.34■■□□□ 1.97
U2AF2-205ENST00000588850 URB2Q14146 1524 aaKnown RBP27.26■■□□□ 1.96
U2AF2-205ENST00000588850 OSCARQ8IYS5 282 aa27.09■■□□□ 1.93
U2AF2-205ENST00000588850 TOPBP1Q92547 1522 aa27.02■■□□□ 1.92
U2AF2-205ENST00000588850 ABCC8Q09428 1581 aa26.98■■□□□ 1.91
U2AF2-205ENST00000588850 DNMBPQ6XZF7 1577 aa26.97■■□□□ 1.91
U2AF2-205ENST00000588850 IFT140Q96RY7 1462 aa26.93■■□□□ 1.9
U2AF2-205ENST00000588850 ZNF608Q9ULD9 1512 aaPredicted RBP26.86■■□□□ 1.89
U2AF2-205ENST00000588850 CUX1P39880 1505 aa26.85■■□□□ 1.89
U2AF2-205ENST00000588850 POLA1P09884 1462 aaPredicted RBP26.79■■□□□ 1.88
U2AF2-205ENST00000588850 TARBP1Q13395 1621 aaKnown RBP26.76■■□□□ 1.87
U2AF2-205ENST00000588850 EIF4G3O43432 1585 aaKnown RBP26.73■■□□□ 1.87
U2AF2-205ENST00000588850 FGD5Q6ZNL6 1462 aa26.72■■□□□ 1.87
U2AF2-205ENST00000588850 RAD54L2Q9Y4B4 1467 aa26.71■■□□□ 1.87
U2AF2-205ENST00000588850 RIMBP3CA6NJZ7 1639 aa26.7■■□□□ 1.86
U2AF2-205ENST00000588850 RIMBP3BA6NNM3 1639 aa26.7■■□□□ 1.86
U2AF2-205ENST00000588850 RIMBP3Q9UFD9 1639 aa26.7■■□□□ 1.86
U2AF2-205ENST00000588850 SOGA1O94964 1423 aa26.67■■□□□ 1.86
U2AF2-205ENST00000588850 AQRO60306 1485 aaKnown RBP eCLIP26.65■■□□□ 1.862e-10■■■■■ 41.5
U2AF2-205ENST00000588850 WRNQ14191 1432 aaPredicted RBP eCLIP26.65■■□□□ 1.86
U2AF2-205ENST00000588850 SYNJ1O43426 1573 aa26.62■■□□□ 1.85
U2AF2-205ENST00000588850 ARHGEF11O15085 1522 aa26.6■■□□□ 1.85
U2AF2-205ENST00000588850 TOP2BQ02880 1626 aa26.57■■□□□ 1.84
U2AF2-205ENST00000588850 BIVM-ERCC5R4GMW8 1640 aa26.56■■□□□ 1.84
U2AF2-205ENST00000588850 TDRD9Q8NDG6 1382 aaKnown RBP26.56■■□□□ 1.84
U2AF2-205ENST00000588850 WDR97A6NE52 1622 aa26.53■■□□□ 1.84
U2AF2-205ENST00000588850 CYB5RLQ6IPT4 315 aa26.5■■□□□ 1.83
U2AF2-205ENST00000588850 CHD1O14646 1710 aa26.46■■□□□ 1.83
U2AF2-205ENST00000588850 ABCA10Q8WWZ4 1543 aa26.45■■□□□ 1.83
U2AF2-205ENST00000588850 SNAPC4Q5SXM2 1469 aa26.41■■□□□ 1.82
U2AF2-205ENST00000588850 FBLN2P98095 1184 aa26.39■■□□□ 1.82
U2AF2-205ENST00000588850 GRIN2BQ13224 1484 aa26.38■■□□□ 1.81
U2AF2-205ENST00000588850 MAGI1Q96QZ7 1491 aaPredicted RBP26.36■■□□□ 1.81
U2AF2-205ENST00000588850 GAPVD1Q14C86 1478 aa26.35■■□□□ 1.81
U2AF2-205ENST00000588850 ABCA5Q8WWZ7 1642 aa26.34■■□□□ 1.81
U2AF2-205ENST00000588850 ARAP1Q96P48 1450 aa26.32■■□□□ 1.8
U2AF2-205ENST00000588850 TRHP20396 242 aaPredicted RBP26.3■■□□□ 1.8
U2AF2-205ENST00000588850 PBRM1Q86U86 1689 aa26.3■■□□□ 1.8
U2AF2-205ENST00000588850 SYNJ2O15056 1496 aa26.25■■□□□ 1.79
U2AF2-205ENST00000588850 CHMP7Q8WUX9 453 aaPredicted RBP26.24■■□□□ 1.79
U2AF2-205ENST00000588850 CLASP1Q7Z460 1538 aa26.18■■□□□ 1.78
U2AF2-205ENST00000588850 ERICH3Q5RHP9 1530 aa26.1■■□□□ 1.77
U2AF2-205ENST00000588850 ADAMTS12P58397 1594 aa26.09■■□□□ 1.77
U2AF2-205ENST00000588850 KIF27Q86VH2 1401 aa26.06■■□□□ 1.76
U2AF2-205ENST00000588850 GRIN2AQ12879 1464 aa26.04■■□□□ 1.76
U2AF2-205ENST00000588850 FHAD1B1AJZ9 1412 aa26.04■■□□□ 1.76
U2AF2-205ENST00000588850 IGF1RP08069 1367 aa26.03■■□□□ 1.76
U2AF2-205ENST00000588850 NUP160Q12769 1436 aa25.97■■□□□ 1.75
U2AF2-205ENST00000588850 RUSC2Q8N2Y8 1516 aa25.96■■□□□ 1.75
U2AF2-205ENST00000588850 CEP170Q5SW79 1584 aa25.94■■□□□ 1.74
U2AF2-205ENST00000588850 CARMIL1Q5VZK9 1371 aa25.84■■□□□ 1.73
U2AF2-205ENST00000588850 CUL7Q14999 1698 aa25.84■■□□□ 1.73
U2AF2-205ENST00000588850 CHIC1Q5VXU3 224 aa25.83■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms