RNA–Protein interactions for RNA: ENST00000457753.5

UBA1-208, Transcript of ubiquitin like modifier activating enzyme 1, humanhuman

TSL 5

Gene UBA1, Length 809 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA1-208ENST00000457753 NISCHQ9Y2I1 1504 aa42.65■■■■■ 4.42
UBA1-208ENST00000457753 ABCC9O60706 1549 aa38.54■■■■□ 3.76
UBA1-208ENST00000457753 CCDC180Q9P1Z9 1646 aa38.28■■■■□ 3.72
UBA1-208ENST00000457753 RB1CC1Q8TDY2 1594 aa36.55■■■■□ 3.44
UBA1-208ENST00000457753 DCAF8L2P0C7V8 631 aa36.32■■■■□ 3.4
UBA1-208ENST00000457753 NACADO15069 1562 aa36.23■■■■□ 3.39
UBA1-208ENST00000457753 DNAJC5BQ9UF47 199 aa36.21■■■■□ 3.39
UBA1-208ENST00000457753 PABPN1Q86U42 306 aaKnown RBP eCLIP35.91■■■■□ 3.344e-10■□□□□ 11.2
UBA1-208ENST00000457753 UNC13AQ9UPW8 1703 aa35.71■■■■□ 3.31
UBA1-208ENST00000457753 MYO15BQ96JP2 1530 aa35.59■■■■□ 3.29
UBA1-208ENST00000457753 BICRAQ9NZM4 1560 aa35.45■■■■□ 3.27
UBA1-208ENST00000457753 ZCCHC6Q5VYS8 1495 aaKnown RBP35.29■■■■□ 3.24
UBA1-208ENST00000457753 DCAF1Q9Y4B6 1507 aa35.13■■■■□ 3.21
UBA1-208ENST00000457753 SCRIBQ14160 1630 aa35.01■■■■□ 3.19
UBA1-208ENST00000457753 SHROOM4Q9ULL8 1493 aa34.87■■■■□ 3.17
UBA1-208ENST00000457753 CC2D2AQ9P2K1 1620 aa34.74■■■■□ 3.15
UBA1-208ENST00000457753 CECR2Q9BXF3 1484 aa34.69■■■■□ 3.14
UBA1-208ENST00000457753 EIF4G1Q04637 1599 aaKnown RBP34.62■■■■□ 3.13
UBA1-208ENST00000457753 NCAPD3P42695 1498 aa33.44■■■□□ 2.94
UBA1-208ENST00000457753 ATAD2BQ9ULI0 1458 aa33.36■■■□□ 2.93
UBA1-208ENST00000457753 DNAJC5Q9H3Z4 198 aa33.31■■■□□ 2.92
UBA1-208ENST00000457753 SMARCA4P51532 1647 aa33.31■■■□□ 2.92
UBA1-208ENST00000457753 ERCC6Q03468 1493 aa33.31■■■□□ 2.92
UBA1-208ENST00000457753 SMARCA2P51531 1590 aa33.26■■■□□ 2.92
UBA1-208ENST00000457753 HMGXB3Q12766 1538 aa33.18■■■□□ 2.9
UBA1-208ENST00000457753 CUX2O14529 1486 aa33.15■■■□□ 2.9
UBA1-208ENST00000457753 BAZ1AQ9NRL2 1556 aaPredicted RBP33.13■■■□□ 2.89
UBA1-208ENST00000457753 BAZ1BQ9UIG0 1483 aaKnown RBP33.08■■■□□ 2.89
UBA1-208ENST00000457753 NESP48681 1621 aa33.05■■■□□ 2.88
UBA1-208ENST00000457753 MROH2BQ7Z745 1585 aa32.9■■■□□ 2.86
UBA1-208ENST00000457753 PEG3Q9GZU2 1588 aa32.89■■■□□ 2.86
UBA1-208ENST00000457753 LAMC3Q9Y6N6 1575 aa32.73■■■□□ 2.83
UBA1-208ENST00000457753 THOC2Q8NI27 1593 aaKnown RBP32.66■■■□□ 2.82
UBA1-208ENST00000457753 KIF21AQ7Z4S6 1674 aa32.61■■■□□ 2.81
UBA1-208ENST00000457753 PDS5BQ9NTI5 1447 aa32.59■■■□□ 2.81
UBA1-208ENST00000457753 WIZO95785 1651 aa32.53■■■□□ 2.8
UBA1-208ENST00000457753 CADPSQ9ULU8 1353 aa32.46■■■□□ 2.79
UBA1-208ENST00000457753 MRC2Q9UBG0 1479 aa32.3■■■□□ 2.76
UBA1-208ENST00000457753 WDR62O43379 1518 aa32.18■■■□□ 2.74
UBA1-208ENST00000457753 CEP164Q9UPV0 1460 aa32.17■■■□□ 2.74
UBA1-208ENST00000457753 RSF1Q96T23 1441 aaPredicted RBP32.16■■■□□ 2.74
UBA1-208ENST00000457753 FANCD2Q9BXW9 1451 aa32.13■■■□□ 2.73
UBA1-208ENST00000457753 TOP2AP11388 1531 aaKnown RBP32.05■■■□□ 2.72
UBA1-208ENST00000457753 CFTRP13569 1480 aa32.03■■■□□ 2.72
UBA1-208ENST00000457753 TRIM41Q8WV44 630 aa31.98■■■□□ 2.71
UBA1-208ENST00000457753 URB2Q14146 1524 aaKnown RBP31.85■■■□□ 2.69
UBA1-208ENST00000457753 CCDC88BA6NC98 1476 aa31.72■■■□□ 2.67
UBA1-208ENST00000457753 OSCARQ8IYS5 282 aa31.72■■■□□ 2.67
UBA1-208ENST00000457753 PRDM2Q13029 1718 aa31.72■■■□□ 2.67
UBA1-208ENST00000457753 IFT140Q96RY7 1462 aa31.51■■■□□ 2.63
UBA1-208ENST00000457753 ZNF608Q9ULD9 1512 aaPredicted RBP31.5■■■□□ 2.63
UBA1-208ENST00000457753 TOPBP1Q92547 1522 aa31.49■■■□□ 2.63
UBA1-208ENST00000457753 ABCC8Q09428 1581 aa31.39■■■□□ 2.61
UBA1-208ENST00000457753 DNMBPQ6XZF7 1577 aa31.35■■■□□ 2.61
UBA1-208ENST00000457753 EIF4G3O43432 1585 aaKnown RBP31.31■■■□□ 2.6
UBA1-208ENST00000457753 RIMBP3CA6NJZ7 1639 aa31.28■■■□□ 2.6
UBA1-208ENST00000457753 RIMBP3BA6NNM3 1639 aa31.28■■■□□ 2.6
UBA1-208ENST00000457753 RIMBP3Q9UFD9 1639 aa31.28■■■□□ 2.6
UBA1-208ENST00000457753 AQRO60306 1485 aaKnown RBP eCLIP31.23■■■□□ 2.59
UBA1-208ENST00000457753 TARBP1Q13395 1621 aaKnown RBP31.19■■■□□ 2.58
UBA1-208ENST00000457753 FBLN2P98095 1184 aa31.18■■■□□ 2.58
UBA1-208ENST00000457753 ARHGEF11O15085 1522 aa31.16■■■□□ 2.58
UBA1-208ENST00000457753 POLA1P09884 1462 aaPredicted RBP31.15■■■□□ 2.58
UBA1-208ENST00000457753 CHD1O14646 1710 aa31.12■■■□□ 2.57
UBA1-208ENST00000457753 RAD54L2Q9Y4B4 1467 aa31.1■■■□□ 2.57
UBA1-208ENST00000457753 SOGA1O94964 1423 aa31.06■■■□□ 2.56
UBA1-208ENST00000457753 CYB5RLQ6IPT4 315 aa31.05■■■□□ 2.56
UBA1-208ENST00000457753 TDRD9Q8NDG6 1382 aaKnown RBP31.05■■■□□ 2.56
UBA1-208ENST00000457753 FGD5Q6ZNL6 1462 aa30.97■■■□□ 2.55
UBA1-208ENST00000457753 CUX1P39880 1505 aa30.91■■■□□ 2.54
UBA1-208ENST00000457753 SNAPC4Q5SXM2 1469 aa30.89■■■□□ 2.54
UBA1-208ENST00000457753 SUPT5HO00267 1087 aaKnown RBP30.87■■■□□ 2.53
UBA1-208ENST00000457753 CHMP7Q8WUX9 453 aaPredicted RBP30.85■■■□□ 2.53
UBA1-208ENST00000457753 ARAP1Q96P48 1450 aa30.83■■■□□ 2.53
UBA1-208ENST00000457753 TRHP20396 242 aaPredicted RBP30.81■■■□□ 2.52
UBA1-208ENST00000457753 WDR97A6NE52 1622 aa30.8■■■□□ 2.52
UBA1-208ENST00000457753 GRIN2BQ13224 1484 aa30.76■■■□□ 2.52
UBA1-208ENST00000457753 MAGI1Q96QZ7 1491 aaPredicted RBP30.75■■■□□ 2.51
UBA1-208ENST00000457753 SYNJ1O43426 1573 aa30.71■■■□□ 2.51
UBA1-208ENST00000457753 CLASP1Q7Z460 1538 aa30.68■■■□□ 2.5
UBA1-208ENST00000457753 SYNJ2O15056 1496 aa30.67■■■□□ 2.5
UBA1-208ENST00000457753 PBRM1Q86U86 1689 aa30.66■■■□□ 2.5
UBA1-208ENST00000457753 GAPVD1Q14C86 1478 aa30.66■■■□□ 2.5
UBA1-208ENST00000457753 ABCA10Q8WWZ4 1543 aa30.56■■■□□ 2.48
UBA1-208ENST00000457753 ABCA5Q8WWZ7 1642 aa30.52■■■□□ 2.48
UBA1-208ENST00000457753 WRNQ14191 1432 aaPredicted RBP eCLIP30.47■■■□□ 2.474e-7■■■□□ 16.7
UBA1-208ENST00000457753 GRIN2AQ12879 1464 aa30.38■■■□□ 2.45
UBA1-208ENST00000457753 TOP2BQ02880 1626 aa30.36■■■□□ 2.45
UBA1-208ENST00000457753 BIVM-ERCC5R4GMW8 1640 aa30.36■■■□□ 2.45
UBA1-208ENST00000457753 ADAMTS12P58397 1594 aa30.32■■■□□ 2.45
UBA1-208ENST00000457753 ERCC6L2Q5T890 1561 aa30.28■■■□□ 2.44
UBA1-208ENST00000457753 CEP170Q5SW79 1584 aa30.27■■■□□ 2.44
UBA1-208ENST00000457753 FHAD1B1AJZ9 1412 aa30.25■■■□□ 2.43
UBA1-208ENST00000457753 NUP160Q12769 1436 aa30.22■■■□□ 2.43
UBA1-208ENST00000457753 ERICH3Q5RHP9 1530 aa30.17■■■□□ 2.42
UBA1-208ENST00000457753 SHROOM2Q13796 1616 aa30.09■■■□□ 2.41
UBA1-208ENST00000457753 PRG4Q92954 1404 aaPredicted RBP30.04■■■□□ 2.4
UBA1-208ENST00000457753 JPH4Q96JJ6 628 aa30.01■■■□□ 2.39
UBA1-208ENST00000457753 AEBP2Q6ZN18 517 aaPredicted RBP29.99■■■□□ 2.39
UBA1-208ENST00000457753 RUSC2Q8N2Y8 1516 aa29.9■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms