RNA–Protein interactions for RNA: ENST00000415680.6

TRIM24-202, Transcript of tripartite motif containing 24, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM24, Length 3,799 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM24-202ENST00000415680 NISCHQ9Y2I1 1504 aa31.4■■■□□ 2.62
TRIM24-202ENST00000415680 DCAF8L2P0C7V8 631 aa29.08■■■□□ 2.25
TRIM24-202ENST00000415680 SHROOM4Q9ULL8 1493 aa29.01■■■□□ 2.23
TRIM24-202ENST00000415680 SUPT5HO00267 1087 aaKnown RBP28.66■■■□□ 2.18
TRIM24-202ENST00000415680 EHMT2Q96KQ7 1210 aa27.37■■□□□ 1.97
TRIM24-202ENST00000415680 FAM9AQ8IZU1 332 aaPredicted RBP26.85■■□□□ 1.89
TRIM24-202ENST00000415680 PCGF6Q9BYE7 350 aa26.85■■□□□ 1.89
TRIM24-202ENST00000415680 CHIC1Q5VXU3 224 aa26.74■■□□□ 1.87
TRIM24-202ENST00000415680 LOC105371045A0A1W2PR82 267 aa26.7■■□□□ 1.87
TRIM24-202ENST00000415680 TTBK1Q5TCY1 1321 aaPredicted RBP26.32■■□□□ 1.8
TRIM24-202ENST00000415680 ZCCHC6Q5VYS8 1495 aaKnown RBP26.3■■□□□ 1.8
TRIM24-202ENST00000415680 PPARGC1BQ86YN6 1023 aaKnown RBP26.3■■□□□ 1.8
TRIM24-202ENST00000415680 TRIM41Q8WV44 630 aa26.18■■□□□ 1.78
TRIM24-202ENST00000415680 MYO15BQ96JP2 1530 aa26.17■■□□□ 1.78
TRIM24-202ENST00000415680 ABCC9O60706 1549 aa26.01■■□□□ 1.75
TRIM24-202ENST00000415680 HRCP23327 699 aa25.93■■□□□ 1.74
TRIM24-202ENST00000415680 RANGAP1P46060 587 aaPredicted RBP25.77■■□□□ 1.72
TRIM24-202ENST00000415680 CCDC180Q9P1Z9 1646 aa25.7■■□□□ 1.71
TRIM24-202ENST00000415680 SCRIBQ14160 1630 aa25.63■■□□□ 1.69
TRIM24-202ENST00000415680 PABPN1Q86U42 306 aaKnown RBP eCLIP25.58■■□□□ 1.69
TRIM24-202ENST00000415680 TRIM26Q12899 539 aaPredicted RBP25.51■■□□□ 1.67
TRIM24-202ENST00000415680 UBTFP17480 764 aaKnown RBP25.33■■□□□ 1.65
TRIM24-202ENST00000415680 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.27■■□□□ 1.64
TRIM24-202ENST00000415680 RSF1Q96T23 1441 aaPredicted RBP25.24■■□□□ 1.63
TRIM24-202ENST00000415680 CCER1Q8TC90 406 aaPredicted RBP25.24■■□□□ 1.63
TRIM24-202ENST00000415680 CECR2Q9BXF3 1484 aa25.13■■□□□ 1.61
TRIM24-202ENST00000415680 HNRNPUL2Q1KMD3 747 aaKnown RBP24.91■■□□□ 1.58
TRIM24-202ENST00000415680 RB1CC1Q8TDY2 1594 aa24.9■■□□□ 1.58
TRIM24-202ENST00000415680 DCAF1Q9Y4B6 1507 aa24.84■■□□□ 1.57
TRIM24-202ENST00000415680 APLP2Q06481 763 aa24.81■■□□□ 1.56
TRIM24-202ENST00000415680 ZEB1P37275 1124 aaPredicted RBP24.78■■□□□ 1.56
TRIM24-202ENST00000415680 YTHDC1Q96MU7 727 aaKnown RBP24.77■■□□□ 1.56
TRIM24-202ENST00000415680 MROH2BQ7Z745 1585 aa24.74■■□□□ 1.55
TRIM24-202ENST00000415680 ATP1B4Q9UN42 357 aaPredicted RBP24.67■■□□□ 1.54
TRIM24-202ENST00000415680 ITGAEP38570 1179 aa24.66■■□□□ 1.54
TRIM24-202ENST00000415680 CSRNP3Q8WYN3 585 aa24.55■■□□□ 1.52
TRIM24-202ENST00000415680 WIZO95785 1651 aa24.52■■□□□ 1.52
TRIM24-202ENST00000415680 ABCC8Q09428 1581 aa24.45■■□□□ 1.5
TRIM24-202ENST00000415680 SOGA1O94964 1423 aa24.4■■□□□ 1.5
TRIM24-202ENST00000415680 DIEXFQ68CQ4 756 aaKnown RBP24.37■■□□□ 1.49
TRIM24-202ENST00000415680 NACADO15069 1562 aa24.36■■□□□ 1.49
TRIM24-202ENST00000415680 CCDC88BA6NC98 1476 aa24.34■■□□□ 1.49
TRIM24-202ENST00000415680 P3H3Q8IVL6 736 aa24.22■■□□□ 1.47
TRIM24-202ENST00000415680 RUSC2Q8N2Y8 1516 aa24.21■■□□□ 1.47
TRIM24-202ENST00000415680 CEP162Q5TB80 1403 aa24.18■■□□□ 1.46
TRIM24-202ENST00000415680 SCAF1Q9H7N4 1312 aaKnown RBP24.13■■□□□ 1.45
TRIM24-202ENST00000415680 BAZ1AQ9NRL2 1556 aaPredicted RBP24.1■■□□□ 1.45
TRIM24-202ENST00000415680 CENPBP07199 599 aaPredicted RBP24.09■■□□□ 1.45
TRIM24-202ENST00000415680 NEUROD1Q13562 356 aa24.06■■□□□ 1.44
TRIM24-202ENST00000415680 GTF3C3Q9Y5Q9 886 aa24.05■■□□□ 1.44
TRIM24-202ENST00000415680 WRNQ14191 1432 aaPredicted RBP eCLIP23.99■■□□□ 1.431e-6■■■■■ 58.5
TRIM24-202ENST00000415680 ARID3CA6NKF2 412 aa23.92■■□□□ 1.42
TRIM24-202ENST00000415680 FAM50AQ14320 339 aaKnown RBP23.92■■□□□ 1.42
TRIM24-202ENST00000415680 ZNF316A6NFI3 1004 aaPredicted RBP23.9■■□□□ 1.42
TRIM24-202ENST00000415680 CLIP1P30622 1438 aa23.88■■□□□ 1.41
TRIM24-202ENST00000415680 ACIN1Q9UKV3 1341 aaKnown RBP23.85■■□□□ 1.41
TRIM24-202ENST00000415680 TNIKQ9UKE5 1360 aa23.83■■□□□ 1.4
TRIM24-202ENST00000415680 MIER1Q8N108 512 aa23.81■■□□□ 1.4
TRIM24-202ENST00000415680 BAZ1BQ9UIG0 1483 aaKnown RBP23.8■■□□□ 1.4
TRIM24-202ENST00000415680 CNGB1Q14028 1251 aaPredicted RBP23.78■■□□□ 1.4
TRIM24-202ENST00000415680 SMARCA4P51532 1647 aa23.77■■□□□ 1.4
TRIM24-202ENST00000415680 TOP2AP11388 1531 aaKnown RBP23.76■■□□□ 1.39
TRIM24-202ENST00000415680 KANK4Q5T7N3 995 aaPredicted RBP23.74■■□□□ 1.39
TRIM24-202ENST00000415680 HIRIP3Q9BW71 556 aaPredicted RBP23.74■■□□□ 1.39
TRIM24-202ENST00000415680 GOLGA3Q08378 1498 aa23.74■■□□□ 1.39
TRIM24-202ENST00000415680 SMARCA2P51531 1590 aa23.7■■□□□ 1.38
TRIM24-202ENST00000415680 RAPGEF2Q9Y4G8 1499 aa23.62■■□□□ 1.37
TRIM24-202ENST00000415680 ATAD2BQ9ULI0 1458 aa23.55■■□□□ 1.36
TRIM24-202ENST00000415680 BCANQ96GW7 911 aa23.54■■□□□ 1.36
TRIM24-202ENST00000415680 CEP164Q9UPV0 1460 aa23.53■■□□□ 1.36
TRIM24-202ENST00000415680 EEA1Q15075 1411 aa23.49■■□□□ 1.35
TRIM24-202ENST00000415680 SIN3AQ96ST3 1273 aa23.43■■□□□ 1.34
TRIM24-202ENST00000415680 POLR3GLQ9BT43 218 aa23.41■■□□□ 1.34
TRIM24-202ENST00000415680 DDX10Q13206 875 aaKnown RBP23.4■■□□□ 1.34
TRIM24-202ENST00000415680 CHIC2Q9UKJ5 165 aa23.39■■□□□ 1.33
TRIM24-202ENST00000415680 SYNJ1O43426 1573 aa23.38■■□□□ 1.33
TRIM24-202ENST00000415680 VPS8Q8N3P4 1428 aa23.37■■□□□ 1.33
TRIM24-202ENST00000415680 TRIM52Q96A61 297 aa23.34■■□□□ 1.33
TRIM24-202ENST00000415680 FBLN2P98095 1184 aa23.33■■□□□ 1.33
TRIM24-202ENST00000415680 BICRAQ9NZM4 1560 aa23.3■■□□□ 1.32
TRIM24-202ENST00000415680 KIF27Q86VH2 1401 aa23.28■■□□□ 1.32
TRIM24-202ENST00000415680 CUX2O14529 1486 aa23.28■■□□□ 1.32
TRIM24-202ENST00000415680 KCNH8Q96L42 1107 aa23.24■■□□□ 1.31
TRIM24-202ENST00000415680 UNC13AQ9UPW8 1703 aa23.23■■□□□ 1.31
TRIM24-202ENST00000415680 PELP1Q8IZL8 1130 aaKnown RBP23.22■■□□□ 1.31
TRIM24-202ENST00000415680 SENP3-EIF4A1A0A087X0R7 540 aa23.21■■□□□ 1.31
TRIM24-202ENST00000415680 DNAJC5BQ9UF47 199 aa23.21■■□□□ 1.31
TRIM24-202ENST00000415680 ZNF326Q5BKZ1 582 aaKnown RBP23.17■■□□□ 1.3
TRIM24-202ENST00000415680 RRP7BPQ9NSQ0 103 aa23.17■■□□□ 1.3
TRIM24-202ENST00000415680 CARMIL1Q5VZK9 1371 aa23.15■■□□□ 1.3
TRIM24-202ENST00000415680 CCNB3Q8WWL7 1395 aa23.1■■□□□ 1.29
TRIM24-202ENST00000415680 EIF4G1Q04637 1599 aaKnown RBP23.1■■□□□ 1.29
TRIM24-202ENST00000415680 TDRD9Q8NDG6 1382 aaKnown RBP23.1■■□□□ 1.29
TRIM24-202ENST00000415680 ZNF777Q9ULD5 760 aaPredicted RBP23.09■■□□□ 1.29
TRIM24-202ENST00000415680 KIF21BO75037 1637 aa23.07■■□□□ 1.28
TRIM24-202ENST00000415680 ARAP1Q96P48 1450 aa23.04■■□□□ 1.28
TRIM24-202ENST00000415680 DHX57Q6P158 1386 aaKnown RBP23.03■■□□□ 1.28
TRIM24-202ENST00000415680 MTUS2Q5JR59 1369 aa23■■□□□ 1.27
TRIM24-202ENST00000415680 RAB3GAP2Q9H2M9 1393 aa23■■□□□ 1.27
TRIM24-202ENST00000415680 FHOD3Q2V2M9 1422 aa23■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms