Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC23.46■■□□□ 1.35
CSNK1G3Q9Y6M4 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC23.46■■□□□ 1.35
CSNK1G3Q9Y6M4 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
CSNK1G3Q9Y6M4 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC23.45■■□□□ 1.34
CSNK1G3Q9Y6M4 BX664725.1-201ENST00000438252 379 ntBASIC23.45■■□□□ 1.34
CSNK1G3Q9Y6M4 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC23.45■■□□□ 1.34
CSNK1G3Q9Y6M4 KRT125P-201ENST00000546827 989 ntBASIC23.45■■□□□ 1.34
CSNK1G3Q9Y6M4 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC23.45■■□□□ 1.34
CSNK1G3Q9Y6M4 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC23.44■■□□□ 1.34
CSNK1G3Q9Y6M4 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC23.44■■□□□ 1.34
CSNK1G3Q9Y6M4 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC23.44■■□□□ 1.34
CSNK1G3Q9Y6M4 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
CSNK1G3Q9Y6M4 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
CSNK1G3Q9Y6M4 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC23.43■■□□□ 1.34
CSNK1G3Q9Y6M4 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC23.43■■□□□ 1.34
CSNK1G3Q9Y6M4 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
CSNK1G3Q9Y6M4 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
CSNK1G3Q9Y6M4 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC23.42■■□□□ 1.34
CSNK1G3Q9Y6M4 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC23.42■■□□□ 1.34
CSNK1G3Q9Y6M4 CREM-229ENST00000474362 1030 ntTSL 2 BASIC23.42■■□□□ 1.34
CSNK1G3Q9Y6M4 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC23.42■■□□□ 1.34
CSNK1G3Q9Y6M4 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
CSNK1G3Q9Y6M4 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
CSNK1G3Q9Y6M4 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
CSNK1G3Q9Y6M4 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC23.41■■□□□ 1.34
CSNK1G3Q9Y6M4 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
CSNK1G3Q9Y6M4 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC23.41■■□□□ 1.34
CSNK1G3Q9Y6M4 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
CSNK1G3Q9Y6M4 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC23.41■■□□□ 1.34
CSNK1G3Q9Y6M4 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC23.41■■□□□ 1.34
CSNK1G3Q9Y6M4 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC23.41■■□□□ 1.34
CSNK1G3Q9Y6M4 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC23.41■■□□□ 1.34
CSNK1G3Q9Y6M4 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC23.41■■□□□ 1.34
CSNK1G3Q9Y6M4 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
CSNK1G3Q9Y6M4 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC23.4■■□□□ 1.34
CSNK1G3Q9Y6M4 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
CSNK1G3Q9Y6M4 MIR4787-201ENST00000607364 84 ntBASIC23.4■■□□□ 1.34
CSNK1G3Q9Y6M4 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC23.4■■□□□ 1.34
CSNK1G3Q9Y6M4 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
CSNK1G3Q9Y6M4 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC23.4■■□□□ 1.34
CSNK1G3Q9Y6M4 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC23.4■■□□□ 1.34
CSNK1G3Q9Y6M4 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC23.39■■□□□ 1.33
CSNK1G3Q9Y6M4 AC137630.3-201ENST00000607245 391 ntBASIC23.39■■□□□ 1.33
CSNK1G3Q9Y6M4 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC23.39■■□□□ 1.33
CSNK1G3Q9Y6M4 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
CSNK1G3Q9Y6M4 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC23.39■■□□□ 1.33
CSNK1G3Q9Y6M4 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
CSNK1G3Q9Y6M4 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC23.38■■□□□ 1.33
CSNK1G3Q9Y6M4 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
CSNK1G3Q9Y6M4 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC23.38■■□□□ 1.33
CSNK1G3Q9Y6M4 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC23.38■■□□□ 1.33
CSNK1G3Q9Y6M4 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
CSNK1G3Q9Y6M4 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
CSNK1G3Q9Y6M4 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
CSNK1G3Q9Y6M4 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
CSNK1G3Q9Y6M4 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC23.37■■□□□ 1.33
CSNK1G3Q9Y6M4 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
CSNK1G3Q9Y6M4 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
CSNK1G3Q9Y6M4 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC23.37■■□□□ 1.33
CSNK1G3Q9Y6M4 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC23.37■■□□□ 1.33
CSNK1G3Q9Y6M4 AC120024.1-201ENST00000562672 995 ntBASIC23.37■■□□□ 1.33
CSNK1G3Q9Y6M4 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC23.37■■□□□ 1.33
CSNK1G3Q9Y6M4 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC23.37■■□□□ 1.33
CSNK1G3Q9Y6M4 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
CSNK1G3Q9Y6M4 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC23.36■■□□□ 1.33
CSNK1G3Q9Y6M4 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC23.36■■□□□ 1.33
CSNK1G3Q9Y6M4 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
CSNK1G3Q9Y6M4 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
CSNK1G3Q9Y6M4 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC23.36■■□□□ 1.33
CSNK1G3Q9Y6M4 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
CSNK1G3Q9Y6M4 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC23.36■■□□□ 1.33
CSNK1G3Q9Y6M4 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC23.36■■□□□ 1.33
CSNK1G3Q9Y6M4 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC23.36■■□□□ 1.33
CSNK1G3Q9Y6M4 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC23.36■■□□□ 1.33
CSNK1G3Q9Y6M4 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC23.36■■□□□ 1.33
CSNK1G3Q9Y6M4 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC23.35■■□□□ 1.33
CSNK1G3Q9Y6M4 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC23.35■■□□□ 1.33
CSNK1G3Q9Y6M4 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC23.35■■□□□ 1.33
CSNK1G3Q9Y6M4 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC23.35■■□□□ 1.33
CSNK1G3Q9Y6M4 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC23.35■■□□□ 1.33
CSNK1G3Q9Y6M4 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC23.35■■□□□ 1.33
CSNK1G3Q9Y6M4 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC23.35■■□□□ 1.33
CSNK1G3Q9Y6M4 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC23.34■■□□□ 1.33
CSNK1G3Q9Y6M4 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
CSNK1G3Q9Y6M4 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
CSNK1G3Q9Y6M4 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
CSNK1G3Q9Y6M4 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC23.34■■□□□ 1.33
CSNK1G3Q9Y6M4 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC23.34■■□□□ 1.33
CSNK1G3Q9Y6M4 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC23.34■■□□□ 1.33
CSNK1G3Q9Y6M4 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC23.33■■□□□ 1.33
CSNK1G3Q9Y6M4 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC23.33■■□□□ 1.33
CSNK1G3Q9Y6M4 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
CSNK1G3Q9Y6M4 GRAMD4P7-201ENST00000578182 1232 ntBASIC23.33■■□□□ 1.33
CSNK1G3Q9Y6M4 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
CSNK1G3Q9Y6M4 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
CSNK1G3Q9Y6M4 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC23.32■■□□□ 1.32
CSNK1G3Q9Y6M4 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC23.32■■□□□ 1.32
CSNK1G3Q9Y6M4 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC23.32■■□□□ 1.32
CSNK1G3Q9Y6M4 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
CSNK1G3Q9Y6M4 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC23.32■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 107.7 ms