Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
RTN4IP1Q8WWV3 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC19.97■□□□□ 0.79
RTN4IP1Q8WWV3 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
RTN4IP1Q8WWV3 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RTN4IP1Q8WWV3 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RTN4IP1Q8WWV3 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RTN4IP1Q8WWV3 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
RTN4IP1Q8WWV3 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
RTN4IP1Q8WWV3 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC19.96■□□□□ 0.79
RTN4IP1Q8WWV3 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RTN4IP1Q8WWV3 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RTN4IP1Q8WWV3 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC19.96■□□□□ 0.79
RTN4IP1Q8WWV3 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC19.96■□□□□ 0.79
RTN4IP1Q8WWV3 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
RTN4IP1Q8WWV3 AC096887.2-201ENST00000623443 1957 ntBASIC19.95■□□□□ 0.78
RTN4IP1Q8WWV3 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RTN4IP1Q8WWV3 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RTN4IP1Q8WWV3 MIR4449-201ENST00000578365 66 ntBASIC19.95■□□□□ 0.78
RTN4IP1Q8WWV3 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC19.95■□□□□ 0.78
RTN4IP1Q8WWV3 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RTN4IP1Q8WWV3 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RTN4IP1Q8WWV3 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RTN4IP1Q8WWV3 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
RTN4IP1Q8WWV3 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC19.94■□□□□ 0.78
RTN4IP1Q8WWV3 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RTN4IP1Q8WWV3 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RTN4IP1Q8WWV3 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
RTN4IP1Q8WWV3 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
RTN4IP1Q8WWV3 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
RTN4IP1Q8WWV3 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
RTN4IP1Q8WWV3 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RTN4IP1Q8WWV3 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RTN4IP1Q8WWV3 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC19.94■□□□□ 0.78
RTN4IP1Q8WWV3 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RTN4IP1Q8WWV3 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RTN4IP1Q8WWV3 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RTN4IP1Q8WWV3 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
RTN4IP1Q8WWV3 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC19.93■□□□□ 0.78
RTN4IP1Q8WWV3 TPT1-202ENST00000379055 948 ntTSL 2 BASIC19.93■□□□□ 0.78
RTN4IP1Q8WWV3 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC19.93■□□□□ 0.78
RTN4IP1Q8WWV3 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
RTN4IP1Q8WWV3 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RTN4IP1Q8WWV3 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RTN4IP1Q8WWV3 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RTN4IP1Q8WWV3 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RTN4IP1Q8WWV3 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
RTN4IP1Q8WWV3 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
RTN4IP1Q8WWV3 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC19.92■□□□□ 0.78
RTN4IP1Q8WWV3 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC19.92■□□□□ 0.78
RTN4IP1Q8WWV3 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
RTN4IP1Q8WWV3 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
RTN4IP1Q8WWV3 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC19.91■□□□□ 0.78
RTN4IP1Q8WWV3 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC19.91■□□□□ 0.78
RTN4IP1Q8WWV3 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
RTN4IP1Q8WWV3 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC19.91■□□□□ 0.78
RTN4IP1Q8WWV3 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC19.91■□□□□ 0.78
RTN4IP1Q8WWV3 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RTN4IP1Q8WWV3 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
RTN4IP1Q8WWV3 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RTN4IP1Q8WWV3 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
RTN4IP1Q8WWV3 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
RTN4IP1Q8WWV3 SRP68-213ENST00000629930 165 ntTSL 5 BASIC19.9■□□□□ 0.78
RTN4IP1Q8WWV3 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RTN4IP1Q8WWV3 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC19.9■□□□□ 0.78
RTN4IP1Q8WWV3 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
RTN4IP1Q8WWV3 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RTN4IP1Q8WWV3 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
RTN4IP1Q8WWV3 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
RTN4IP1Q8WWV3 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
RTN4IP1Q8WWV3 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
RTN4IP1Q8WWV3 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
RTN4IP1Q8WWV3 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
RTN4IP1Q8WWV3 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RTN4IP1Q8WWV3 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RTN4IP1Q8WWV3 AL359504.2-201ENST00000605506 1601 ntBASIC19.88■□□□□ 0.77
RTN4IP1Q8WWV3 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RTN4IP1Q8WWV3 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RTN4IP1Q8WWV3 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RTN4IP1Q8WWV3 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RTN4IP1Q8WWV3 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RTN4IP1Q8WWV3 AC060814.1-201ENST00000554326 538 ntBASIC19.88■□□□□ 0.77
RTN4IP1Q8WWV3 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RTN4IP1Q8WWV3 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RTN4IP1Q8WWV3 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC19.88■□□□□ 0.77
RTN4IP1Q8WWV3 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
RTN4IP1Q8WWV3 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RTN4IP1Q8WWV3 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
RTN4IP1Q8WWV3 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RTN4IP1Q8WWV3 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
RTN4IP1Q8WWV3 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RTN4IP1Q8WWV3 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RTN4IP1Q8WWV3 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC19.86■□□□□ 0.77
RTN4IP1Q8WWV3 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC19.86■□□□□ 0.77
RTN4IP1Q8WWV3 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RTN4IP1Q8WWV3 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RTN4IP1Q8WWV3 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
RTN4IP1Q8WWV3 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC19.86■□□□□ 0.77
RTN4IP1Q8WWV3 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RTN4IP1Q8WWV3 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
RTN4IP1Q8WWV3 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms