Protein–RNA interactions for Protein: Q7Z3Y7

KRT28, Keratin, type I cytoskeletal 28, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28Q7Z3Y7 AC096631.2-201ENST00000436136 790 ntBASIC32.98■■■□□ 2.87
KRT28Q7Z3Y7 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC32.98■■■□□ 2.87
KRT28Q7Z3Y7 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC32.98■■■□□ 2.87
KRT28Q7Z3Y7 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC32.98■■■□□ 2.87
KRT28Q7Z3Y7 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC32.98■■■□□ 2.87
KRT28Q7Z3Y7 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC32.98■■■□□ 2.87
KRT28Q7Z3Y7 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC32.98■■■□□ 2.87
KRT28Q7Z3Y7 MIR6724-1-201ENST00000616420 92 ntBASIC32.98■■■□□ 2.87
KRT28Q7Z3Y7 MIR6724-2-201ENST00000616483 92 ntBASIC32.98■■■□□ 2.87
KRT28Q7Z3Y7 MIR6724-4-201ENST00000617390 92 ntBASIC32.98■■■□□ 2.87
KRT28Q7Z3Y7 MIR6724-3-201ENST00000622482 92 ntBASIC32.98■■■□□ 2.87
KRT28Q7Z3Y7 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC32.98■■■□□ 2.87
KRT28Q7Z3Y7 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC32.98■■■□□ 2.87
KRT28Q7Z3Y7 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC32.98■■■□□ 2.87
KRT28Q7Z3Y7 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC32.97■■■□□ 2.87
KRT28Q7Z3Y7 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC32.97■■■□□ 2.87
KRT28Q7Z3Y7 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC32.97■■■□□ 2.87
KRT28Q7Z3Y7 MIR4466-201ENST00000606121 54 ntBASIC32.97■■■□□ 2.87
KRT28Q7Z3Y7 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC32.97■■■□□ 2.87
KRT28Q7Z3Y7 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC32.96■■■□□ 2.87
KRT28Q7Z3Y7 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC32.96■■■□□ 2.87
KRT28Q7Z3Y7 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC32.95■■■□□ 2.87
KRT28Q7Z3Y7 LSM4-201ENST00000252816 986 ntTSL 2 BASIC32.95■■■□□ 2.87
KRT28Q7Z3Y7 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC32.95■■■□□ 2.87
KRT28Q7Z3Y7 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC32.94■■■□□ 2.86
KRT28Q7Z3Y7 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC32.94■■■□□ 2.86
KRT28Q7Z3Y7 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC32.94■■■□□ 2.86
KRT28Q7Z3Y7 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC32.94■■■□□ 2.86
KRT28Q7Z3Y7 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC32.94■■■□□ 2.86
KRT28Q7Z3Y7 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC32.93■■■□□ 2.86
KRT28Q7Z3Y7 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC32.93■■■□□ 2.86
KRT28Q7Z3Y7 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC32.93■■■□□ 2.86
KRT28Q7Z3Y7 ABCB10P1-201ENST00000614297 2181 ntBASIC32.93■■■□□ 2.86
KRT28Q7Z3Y7 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC32.93■■■□□ 2.86
KRT28Q7Z3Y7 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC32.92■■■□□ 2.86
KRT28Q7Z3Y7 SENP5-202ENST00000419026 973 ntTSL 3 BASIC32.91■■■□□ 2.86
KRT28Q7Z3Y7 AL356740.2-201ENST00000601559 647 ntBASIC32.91■■■□□ 2.86
KRT28Q7Z3Y7 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC32.91■■■□□ 2.86
KRT28Q7Z3Y7 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC32.91■■■□□ 2.86
KRT28Q7Z3Y7 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC32.91■■■□□ 2.86
KRT28Q7Z3Y7 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC32.91■■■□□ 2.86
KRT28Q7Z3Y7 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC32.91■■■□□ 2.86
KRT28Q7Z3Y7 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC32.91■■■□□ 2.86
KRT28Q7Z3Y7 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC32.9■■■□□ 2.86
KRT28Q7Z3Y7 MTDHP2-201ENST00000601468 714 ntBASIC32.9■■■□□ 2.86
KRT28Q7Z3Y7 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC32.9■■■□□ 2.86
KRT28Q7Z3Y7 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC32.9■■■□□ 2.86
KRT28Q7Z3Y7 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC32.89■■■□□ 2.86
KRT28Q7Z3Y7 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC32.89■■■□□ 2.86
KRT28Q7Z3Y7 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC32.89■■■□□ 2.86
KRT28Q7Z3Y7 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC32.89■■■□□ 2.86
KRT28Q7Z3Y7 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC32.89■■■□□ 2.86
KRT28Q7Z3Y7 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC32.89■■■□□ 2.86
KRT28Q7Z3Y7 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC32.89■■■□□ 2.86
KRT28Q7Z3Y7 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC32.88■■■□□ 2.85
KRT28Q7Z3Y7 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC32.88■■■□□ 2.85
KRT28Q7Z3Y7 BX255925.1-201ENST00000566954 1854 ntBASIC32.88■■■□□ 2.85
KRT28Q7Z3Y7 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC32.87■■■□□ 2.85
KRT28Q7Z3Y7 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC32.87■■■□□ 2.85
KRT28Q7Z3Y7 QDPR-206ENST00000508623 601 ntTSL 3 BASIC32.87■■■□□ 2.85
KRT28Q7Z3Y7 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC32.87■■■□□ 2.85
KRT28Q7Z3Y7 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC32.87■■■□□ 2.85
KRT28Q7Z3Y7 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC32.87■■■□□ 2.85
KRT28Q7Z3Y7 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC32.86■■■□□ 2.85
KRT28Q7Z3Y7 AC133561.4-201ENST00000566112 224 ntBASIC32.86■■■□□ 2.85
KRT28Q7Z3Y7 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC32.85■■■□□ 2.85
KRT28Q7Z3Y7 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC32.85■■■□□ 2.85
KRT28Q7Z3Y7 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC32.84■■■□□ 2.85
KRT28Q7Z3Y7 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC32.84■■■□□ 2.85
KRT28Q7Z3Y7 AL512631.2-201ENST00000604634 923 ntBASIC32.84■■■□□ 2.85
KRT28Q7Z3Y7 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC32.84■■■□□ 2.85
KRT28Q7Z3Y7 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC32.83■■■□□ 2.85
KRT28Q7Z3Y7 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC32.83■■■□□ 2.85
KRT28Q7Z3Y7 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC32.83■■■□□ 2.85
KRT28Q7Z3Y7 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC32.83■■■□□ 2.85
KRT28Q7Z3Y7 EXOG-217ENST00000630638 197 ntTSL 5 BASIC32.83■■■□□ 2.85
KRT28Q7Z3Y7 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC32.82■■■□□ 2.84
KRT28Q7Z3Y7 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC32.82■■■□□ 2.84
KRT28Q7Z3Y7 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC32.82■■■□□ 2.84
KRT28Q7Z3Y7 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC32.82■■■□□ 2.84
KRT28Q7Z3Y7 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC32.82■■■□□ 2.84
KRT28Q7Z3Y7 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC32.81■■■□□ 2.84
KRT28Q7Z3Y7 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC32.81■■■□□ 2.84
KRT28Q7Z3Y7 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC32.81■■■□□ 2.84
KRT28Q7Z3Y7 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC32.8■■■□□ 2.84
KRT28Q7Z3Y7 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC32.8■■■□□ 2.84
KRT28Q7Z3Y7 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC32.8■■■□□ 2.84
KRT28Q7Z3Y7 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC32.8■■■□□ 2.84
KRT28Q7Z3Y7 TK2-202ENST00000417693 1046 ntTSL 2 BASIC32.8■■■□□ 2.84
KRT28Q7Z3Y7 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC32.8■■■□□ 2.84
KRT28Q7Z3Y7 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC32.8■■■□□ 2.84
KRT28Q7Z3Y7 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC32.79■■■□□ 2.84
KRT28Q7Z3Y7 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC32.79■■■□□ 2.84
KRT28Q7Z3Y7 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC32.79■■■□□ 2.84
KRT28Q7Z3Y7 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC32.79■■■□□ 2.84
KRT28Q7Z3Y7 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC32.79■■■□□ 2.84
KRT28Q7Z3Y7 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC32.78■■■□□ 2.84
KRT28Q7Z3Y7 GAK-223ENST00000628912 497 ntTSL 5 BASIC32.78■■■□□ 2.84
KRT28Q7Z3Y7 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC32.78■■■□□ 2.84
KRT28Q7Z3Y7 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC32.78■■■□□ 2.84
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms