Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC32.33■■■□□ 2.77
LTN1O94822 AC131281.2-201ENST00000520478 145 ntBASIC32.33■■■□□ 2.77
LTN1O94822 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC32.33■■■□□ 2.77
LTN1O94822 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC32.33■■■□□ 2.77
LTN1O94822 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC32.32■■■□□ 2.77
LTN1O94822 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC32.32■■■□□ 2.76
LTN1O94822 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC32.31■■■□□ 2.76
LTN1O94822 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC32.31■■■□□ 2.76
LTN1O94822 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC32.31■■■□□ 2.76
LTN1O94822 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC32.31■■■□□ 2.76
LTN1O94822 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC32.31■■■□□ 2.76
LTN1O94822 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC32.3■■■□□ 2.76
LTN1O94822 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC32.3■■■□□ 2.76
LTN1O94822 AC120024.1-201ENST00000562672 995 ntBASIC32.3■■■□□ 2.76
LTN1O94822 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC32.3■■■□□ 2.76
LTN1O94822 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC32.3■■■□□ 2.76
LTN1O94822 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC32.3■■■□□ 2.76
LTN1O94822 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC32.29■■■□□ 2.76
LTN1O94822 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC32.29■■■□□ 2.76
LTN1O94822 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC32.29■■■□□ 2.76
LTN1O94822 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC32.29■■■□□ 2.76
LTN1O94822 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC32.29■■■□□ 2.76
LTN1O94822 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC32.29■■■□□ 2.76
LTN1O94822 AC021242.3-201ENST00000607598 1377 ntBASIC32.28■■■□□ 2.76
LTN1O94822 AP004609.3-201ENST00000610705 1884 ntBASIC32.28■■■□□ 2.76
LTN1O94822 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC32.28■■■□□ 2.76
LTN1O94822 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC32.28■■■□□ 2.76
LTN1O94822 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC32.28■■■□□ 2.76
LTN1O94822 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC32.28■■■□□ 2.76
LTN1O94822 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC32.27■■■□□ 2.76
LTN1O94822 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC32.27■■■□□ 2.76
LTN1O94822 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC32.27■■■□□ 2.76
LTN1O94822 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC32.27■■■□□ 2.76
LTN1O94822 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC32.27■■■□□ 2.76
LTN1O94822 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC32.27■■■□□ 2.76
LTN1O94822 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.75
LTN1O94822 SENP5-202ENST00000419026 973 ntTSL 3 BASIC32.26■■■□□ 2.75
LTN1O94822 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC32.26■■■□□ 2.75
LTN1O94822 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC32.25■■■□□ 2.75
LTN1O94822 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC32.25■■■□□ 2.75
LTN1O94822 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC32.24■■■□□ 2.75
LTN1O94822 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC32.24■■■□□ 2.75
LTN1O94822 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC32.24■■■□□ 2.75
LTN1O94822 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC32.23■■■□□ 2.75
LTN1O94822 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC32.23■■■□□ 2.75
LTN1O94822 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC32.23■■■□□ 2.75
LTN1O94822 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC32.23■■■□□ 2.75
LTN1O94822 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC32.23■■■□□ 2.75
LTN1O94822 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC32.22■■■□□ 2.75
LTN1O94822 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC32.22■■■□□ 2.75
LTN1O94822 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC32.22■■■□□ 2.75
LTN1O94822 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC32.22■■■□□ 2.75
LTN1O94822 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC32.21■■■□□ 2.75
LTN1O94822 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC32.21■■■□□ 2.75
LTN1O94822 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC32.21■■■□□ 2.75
LTN1O94822 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC32.21■■■□□ 2.75
LTN1O94822 AC011551.1-201ENST00000614101 683 ntBASIC32.2■■■□□ 2.75
LTN1O94822 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC32.2■■■□□ 2.75
LTN1O94822 AC008406.3-201ENST00000620001 1374 ntBASIC32.2■■■□□ 2.74
LTN1O94822 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC32.2■■■□□ 2.74
LTN1O94822 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC32.2■■■□□ 2.74
LTN1O94822 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC32.19■■■□□ 2.74
LTN1O94822 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC32.19■■■□□ 2.74
LTN1O94822 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC32.19■■■□□ 2.74
LTN1O94822 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC32.19■■■□□ 2.74
LTN1O94822 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC32.19■■■□□ 2.74
LTN1O94822 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC32.18■■■□□ 2.74
LTN1O94822 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC32.18■■■□□ 2.74
LTN1O94822 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC32.18■■■□□ 2.74
LTN1O94822 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC32.18■■■□□ 2.74
LTN1O94822 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC32.18■■■□□ 2.74
LTN1O94822 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC32.18■■■□□ 2.74
LTN1O94822 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC32.17■■■□□ 2.74
LTN1O94822 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC32.17■■■□□ 2.74
LTN1O94822 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC32.17■■■□□ 2.74
LTN1O94822 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC32.17■■■□□ 2.74
LTN1O94822 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC32.17■■■□□ 2.74
LTN1O94822 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC32.17■■■□□ 2.74
LTN1O94822 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC32.17■■■□□ 2.74
LTN1O94822 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC32.17■■■□□ 2.74
LTN1O94822 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC32.16■■■□□ 2.74
LTN1O94822 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC32.16■■■□□ 2.74
LTN1O94822 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC32.15■■■□□ 2.74
LTN1O94822 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC32.15■■■□□ 2.74
LTN1O94822 TSPY9P-201ENST00000440215 945 ntBASIC32.15■■■□□ 2.74
LTN1O94822 TSPY11P-201ENST00000442607 1045 ntBASIC32.15■■■□□ 2.74
LTN1O94822 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC32.15■■■□□ 2.74
LTN1O94822 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC32.15■■■□□ 2.74
LTN1O94822 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC32.15■■■□□ 2.74
LTN1O94822 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC32.14■■■□□ 2.74
LTN1O94822 TRIR-202ENST00000588213 841 ntTSL 3 BASIC32.14■■■□□ 2.74
LTN1O94822 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC32.13■■■□□ 2.73
LTN1O94822 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC32.13■■■□□ 2.73
LTN1O94822 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC32.12■■■□□ 2.73
LTN1O94822 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC32.12■■■□□ 2.73
LTN1O94822 AC092028.1-203ENST00000608262 953 ntBASIC32.12■■■□□ 2.73
LTN1O94822 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC32.12■■■□□ 2.73
LTN1O94822 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC32.12■■■□□ 2.73
LTN1O94822 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC32.11■■■□□ 2.73
LTN1O94822 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC32.11■■■□□ 2.73
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms