Protein–RNA interactions for Protein: C9JG80

NPIPB4, Nuclear pore complex-interacting protein family member B4, humanhuman

Predictions only

Length 1,138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4C9JG80 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
NPIPB4C9JG80 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
NPIPB4C9JG80 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
NPIPB4C9JG80 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
NPIPB4C9JG80 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
NPIPB4C9JG80 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC21.24■□□□□ 0.99
NPIPB4C9JG80 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
NPIPB4C9JG80 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
NPIPB4C9JG80 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
NPIPB4C9JG80 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
NPIPB4C9JG80 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC21.23■□□□□ 0.99
NPIPB4C9JG80 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
NPIPB4C9JG80 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
NPIPB4C9JG80 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
NPIPB4C9JG80 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC21.23■□□□□ 0.99
NPIPB4C9JG80 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
NPIPB4C9JG80 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
NPIPB4C9JG80 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
NPIPB4C9JG80 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC21.22■□□□□ 0.99
NPIPB4C9JG80 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC21.22■□□□□ 0.99
NPIPB4C9JG80 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
NPIPB4C9JG80 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC21.22■□□□□ 0.99
NPIPB4C9JG80 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
NPIPB4C9JG80 MED17-227ENST00000640521 2047 ntTSL 5 BASIC21.22■□□□□ 0.99
NPIPB4C9JG80 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
NPIPB4C9JG80 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
NPIPB4C9JG80 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
NPIPB4C9JG80 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
NPIPB4C9JG80 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
NPIPB4C9JG80 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
NPIPB4C9JG80 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC21.21■□□□□ 0.99
NPIPB4C9JG80 SLC6A10P-202ENST00000431994 2058 ntBASIC21.2■□□□□ 0.99
NPIPB4C9JG80 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC21.2■□□□□ 0.99
NPIPB4C9JG80 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
NPIPB4C9JG80 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC21.2■□□□□ 0.98
NPIPB4C9JG80 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
NPIPB4C9JG80 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
NPIPB4C9JG80 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
NPIPB4C9JG80 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
NPIPB4C9JG80 AC009831.1-201ENST00000580420 1582 ntBASIC21.19■□□□□ 0.98
NPIPB4C9JG80 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
NPIPB4C9JG80 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC21.19■□□□□ 0.98
NPIPB4C9JG80 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
NPIPB4C9JG80 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
NPIPB4C9JG80 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
NPIPB4C9JG80 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
NPIPB4C9JG80 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
NPIPB4C9JG80 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
NPIPB4C9JG80 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC21.19■□□□□ 0.98
NPIPB4C9JG80 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
NPIPB4C9JG80 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
NPIPB4C9JG80 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
NPIPB4C9JG80 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
NPIPB4C9JG80 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
NPIPB4C9JG80 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
NPIPB4C9JG80 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
NPIPB4C9JG80 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
NPIPB4C9JG80 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
NPIPB4C9JG80 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
NPIPB4C9JG80 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
NPIPB4C9JG80 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
NPIPB4C9JG80 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC21.17■□□□□ 0.98
NPIPB4C9JG80 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
NPIPB4C9JG80 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
NPIPB4C9JG80 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
NPIPB4C9JG80 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
NPIPB4C9JG80 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC21.17■□□□□ 0.98
NPIPB4C9JG80 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
NPIPB4C9JG80 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
NPIPB4C9JG80 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
NPIPB4C9JG80 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
NPIPB4C9JG80 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
NPIPB4C9JG80 AC138932.3-201ENST00000567634 1902 ntBASIC21.16■□□□□ 0.98
NPIPB4C9JG80 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
NPIPB4C9JG80 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
NPIPB4C9JG80 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC21.16■□□□□ 0.98
NPIPB4C9JG80 AP003733.4-201ENST00000623785 1697 ntBASIC21.16■□□□□ 0.98
NPIPB4C9JG80 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
NPIPB4C9JG80 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
NPIPB4C9JG80 AC133552.2-201ENST00000619106 1032 ntBASIC21.16■□□□□ 0.98
NPIPB4C9JG80 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
NPIPB4C9JG80 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
NPIPB4C9JG80 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
NPIPB4C9JG80 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC21.15■□□□□ 0.98
NPIPB4C9JG80 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC21.15■□□□□ 0.98
NPIPB4C9JG80 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
NPIPB4C9JG80 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
NPIPB4C9JG80 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
NPIPB4C9JG80 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
NPIPB4C9JG80 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
NPIPB4C9JG80 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
NPIPB4C9JG80 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
NPIPB4C9JG80 RARRES2P2-201ENST00000394842 485 ntBASIC21.14■□□□□ 0.97
NPIPB4C9JG80 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
NPIPB4C9JG80 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
NPIPB4C9JG80 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC21.13■□□□□ 0.97
NPIPB4C9JG80 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
NPIPB4C9JG80 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
NPIPB4C9JG80 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC21.13■□□□□ 0.97
NPIPB4C9JG80 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC21.13■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms