Protein–RNA interactions for Protein: A6NI15

MSGN1, Mesogenin-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSGN1A6NI15 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
MSGN1A6NI15 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
MSGN1A6NI15 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
MSGN1A6NI15 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC19.71■□□□□ 0.75
MSGN1A6NI15 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
MSGN1A6NI15 LINC01124-201ENST00000409786 2117 ntBASIC19.71■□□□□ 0.75
MSGN1A6NI15 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC19.71■□□□□ 0.75
MSGN1A6NI15 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
MSGN1A6NI15 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
MSGN1A6NI15 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
MSGN1A6NI15 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
MSGN1A6NI15 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
MSGN1A6NI15 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC19.7■□□□□ 0.74
MSGN1A6NI15 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC19.7■□□□□ 0.74
MSGN1A6NI15 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
MSGN1A6NI15 LINC00543-201ENST00000567234 1845 ntBASIC19.7■□□□□ 0.74
MSGN1A6NI15 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
MSGN1A6NI15 CR559946.2-201ENST00000623684 991 ntBASIC19.7■□□□□ 0.74
MSGN1A6NI15 GDI1-215ENST00000630693 786 ntTSL 4 BASIC19.7■□□□□ 0.74
MSGN1A6NI15 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC19.7■□□□□ 0.74
MSGN1A6NI15 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
MSGN1A6NI15 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
MSGN1A6NI15 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
MSGN1A6NI15 CLDN5-201ENST00000403084 2357 ntBASIC19.69■□□□□ 0.74
MSGN1A6NI15 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
MSGN1A6NI15 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
MSGN1A6NI15 MIR3648-2-201ENST00000581792 180 ntBASIC19.69■□□□□ 0.74
MSGN1A6NI15 MIR7108-201ENST00000614319 87 ntBASIC19.69■□□□□ 0.74
MSGN1A6NI15 MIR3648-1-201ENST00000615959 180 ntBASIC19.69■□□□□ 0.74
MSGN1A6NI15 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
MSGN1A6NI15 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
MSGN1A6NI15 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
MSGN1A6NI15 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
MSGN1A6NI15 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
MSGN1A6NI15 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
MSGN1A6NI15 WHAMMP3-201ENST00000611636 1609 ntBASIC19.68■□□□□ 0.74
MSGN1A6NI15 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
MSGN1A6NI15 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
MSGN1A6NI15 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC19.67■□□□□ 0.74
MSGN1A6NI15 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
MSGN1A6NI15 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
MSGN1A6NI15 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
MSGN1A6NI15 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
MSGN1A6NI15 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
MSGN1A6NI15 AC097639.1-201ENST00000565519 1891 ntBASIC19.67■□□□□ 0.74
MSGN1A6NI15 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
MSGN1A6NI15 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
MSGN1A6NI15 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC19.66■□□□□ 0.74
MSGN1A6NI15 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
MSGN1A6NI15 HLA-V-202ENST00000446817 847 ntBASIC19.66■□□□□ 0.74
MSGN1A6NI15 MACF1-219ENST00000484793 834 ntTSL 2 BASIC19.66■□□□□ 0.74
MSGN1A6NI15 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC19.66■□□□□ 0.74
MSGN1A6NI15 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
MSGN1A6NI15 MIR219A2-201ENST00000608502 1504 ntBASIC19.66■□□□□ 0.74
MSGN1A6NI15 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC19.66■□□□□ 0.74
MSGN1A6NI15 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
MSGN1A6NI15 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
MSGN1A6NI15 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
MSGN1A6NI15 CHST11-203ENST00000547956 936 ntTSL 2 BASIC19.65■□□□□ 0.74
MSGN1A6NI15 AC016575.1-201ENST00000607026 382 ntBASIC19.65■□□□□ 0.74
MSGN1A6NI15 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
MSGN1A6NI15 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
MSGN1A6NI15 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
MSGN1A6NI15 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
MSGN1A6NI15 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
MSGN1A6NI15 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
MSGN1A6NI15 AC148477.6-201ENST00000623746 465 ntBASIC19.64■□□□□ 0.73
MSGN1A6NI15 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
MSGN1A6NI15 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
MSGN1A6NI15 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.73
MSGN1A6NI15 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC19.64■□□□□ 0.73
MSGN1A6NI15 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC19.64■□□□□ 0.73
MSGN1A6NI15 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
MSGN1A6NI15 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
MSGN1A6NI15 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
MSGN1A6NI15 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC19.63■□□□□ 0.73
MSGN1A6NI15 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC19.63■□□□□ 0.73
MSGN1A6NI15 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
MSGN1A6NI15 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC19.63■□□□□ 0.73
MSGN1A6NI15 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
MSGN1A6NI15 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
MSGN1A6NI15 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC19.63■□□□□ 0.73
MSGN1A6NI15 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
MSGN1A6NI15 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
MSGN1A6NI15 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
MSGN1A6NI15 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC19.63■□□□□ 0.73
MSGN1A6NI15 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
MSGN1A6NI15 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
MSGN1A6NI15 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC19.62■□□□□ 0.73
MSGN1A6NI15 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC19.62■□□□□ 0.73
MSGN1A6NI15 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
MSGN1A6NI15 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC19.62■□□□□ 0.73
MSGN1A6NI15 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
MSGN1A6NI15 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
MSGN1A6NI15 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
MSGN1A6NI15 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
MSGN1A6NI15 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
MSGN1A6NI15 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
MSGN1A6NI15 PVT1-219ENST00000523427 938 ntTSL 3 BASIC19.61■□□□□ 0.73
MSGN1A6NI15 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms