Protein–RNA interactions for Protein: A0A0A6YYJ7

TRAV8-3, T-cell receptor alpha variable 8-3 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-3A0A0A6YYJ7 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRAV8-3A0A0A6YYJ7 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TRAV8-3A0A0A6YYJ7 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRAV8-3A0A0A6YYJ7 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRAV8-3A0A0A6YYJ7 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TRAV8-3A0A0A6YYJ7 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRAV8-3A0A0A6YYJ7 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRAV8-3A0A0A6YYJ7 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC16.73■□□□□ 0.27
TRAV8-3A0A0A6YYJ7 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRAV8-3A0A0A6YYJ7 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TRAV8-3A0A0A6YYJ7 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRAV8-3A0A0A6YYJ7 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TRAV8-3A0A0A6YYJ7 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRAV8-3A0A0A6YYJ7 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TRAV8-3A0A0A6YYJ7 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRAV8-3A0A0A6YYJ7 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC16.72■□□□□ 0.27
TRAV8-3A0A0A6YYJ7 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRAV8-3A0A0A6YYJ7 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRAV8-3A0A0A6YYJ7 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC16.72■□□□□ 0.27
TRAV8-3A0A0A6YYJ7 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
TRAV8-3A0A0A6YYJ7 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC16.72■□□□□ 0.27
TRAV8-3A0A0A6YYJ7 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC16.72■□□□□ 0.27
TRAV8-3A0A0A6YYJ7 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC16.72■□□□□ 0.27
TRAV8-3A0A0A6YYJ7 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRAV8-3A0A0A6YYJ7 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC16.71■□□□□ 0.27
TRAV8-3A0A0A6YYJ7 WHAMMP3-201ENST00000611636 1609 ntBASIC16.71■□□□□ 0.27
TRAV8-3A0A0A6YYJ7 AC142472.1-201ENST00000612013 1741 ntBASIC16.71■□□□□ 0.27
TRAV8-3A0A0A6YYJ7 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRAV8-3A0A0A6YYJ7 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC16.71■□□□□ 0.27
TRAV8-3A0A0A6YYJ7 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
TRAV8-3A0A0A6YYJ7 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TRAV8-3A0A0A6YYJ7 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC16.71■□□□□ 0.27
TRAV8-3A0A0A6YYJ7 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TRAV8-3A0A0A6YYJ7 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TRAV8-3A0A0A6YYJ7 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TRAV8-3A0A0A6YYJ7 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
TRAV8-3A0A0A6YYJ7 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRAV8-3A0A0A6YYJ7 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
TRAV8-3A0A0A6YYJ7 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRAV8-3A0A0A6YYJ7 HES4-202ENST00000428771 1040 ntTSL 2 BASIC16.7■□□□□ 0.26
TRAV8-3A0A0A6YYJ7 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC16.7■□□□□ 0.26
TRAV8-3A0A0A6YYJ7 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC16.7■□□□□ 0.26
TRAV8-3A0A0A6YYJ7 SRP68-213ENST00000629930 165 ntTSL 5 BASIC16.7■□□□□ 0.26
TRAV8-3A0A0A6YYJ7 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TRAV8-3A0A0A6YYJ7 MED17-227ENST00000640521 2047 ntTSL 5 BASIC16.7■□□□□ 0.26
TRAV8-3A0A0A6YYJ7 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
TRAV8-3A0A0A6YYJ7 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRAV8-3A0A0A6YYJ7 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
TRAV8-3A0A0A6YYJ7 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TRAV8-3A0A0A6YYJ7 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRAV8-3A0A0A6YYJ7 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRAV8-3A0A0A6YYJ7 AC142381.3-201ENST00000568208 1670 ntBASIC16.69■□□□□ 0.26
TRAV8-3A0A0A6YYJ7 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TRAV8-3A0A0A6YYJ7 AL359258.2-201ENST00000564063 1566 ntBASIC16.69■□□□□ 0.26
TRAV8-3A0A0A6YYJ7 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
TRAV8-3A0A0A6YYJ7 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
TRAV8-3A0A0A6YYJ7 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRAV8-3A0A0A6YYJ7 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC16.69■□□□□ 0.26
TRAV8-3A0A0A6YYJ7 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
TRAV8-3A0A0A6YYJ7 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TRAV8-3A0A0A6YYJ7 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC16.69■□□□□ 0.26
TRAV8-3A0A0A6YYJ7 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRAV8-3A0A0A6YYJ7 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRAV8-3A0A0A6YYJ7 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRAV8-3A0A0A6YYJ7 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRAV8-3A0A0A6YYJ7 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
TRAV8-3A0A0A6YYJ7 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRAV8-3A0A0A6YYJ7 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TRAV8-3A0A0A6YYJ7 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC16.68■□□□□ 0.26
TRAV8-3A0A0A6YYJ7 CEP120-209ENST00000515110 606 ntTSL 3 BASIC16.68■□□□□ 0.26
TRAV8-3A0A0A6YYJ7 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC16.68■□□□□ 0.26
TRAV8-3A0A0A6YYJ7 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TRAV8-3A0A0A6YYJ7 PREB-202ENST00000406567 1910 ntTSL 5 BASIC16.68■□□□□ 0.26
TRAV8-3A0A0A6YYJ7 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRAV8-3A0A0A6YYJ7 TMEM202-AS1-202ENST00000565181 2325 ntBASIC16.68■□□□□ 0.26
TRAV8-3A0A0A6YYJ7 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRAV8-3A0A0A6YYJ7 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC16.67■□□□□ 0.26
TRAV8-3A0A0A6YYJ7 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRAV8-3A0A0A6YYJ7 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRAV8-3A0A0A6YYJ7 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRAV8-3A0A0A6YYJ7 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRAV8-3A0A0A6YYJ7 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRAV8-3A0A0A6YYJ7 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC16.67■□□□□ 0.26
TRAV8-3A0A0A6YYJ7 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC16.67■□□□□ 0.26
TRAV8-3A0A0A6YYJ7 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRAV8-3A0A0A6YYJ7 AC022413.1-201ENST00000624602 984 ntBASIC16.67■□□□□ 0.26
TRAV8-3A0A0A6YYJ7 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRAV8-3A0A0A6YYJ7 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
TRAV8-3A0A0A6YYJ7 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TRAV8-3A0A0A6YYJ7 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC16.67■□□□□ 0.26
TRAV8-3A0A0A6YYJ7 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC16.67■□□□□ 0.26
TRAV8-3A0A0A6YYJ7 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC16.67■□□□□ 0.26
TRAV8-3A0A0A6YYJ7 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TRAV8-3A0A0A6YYJ7 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
TRAV8-3A0A0A6YYJ7 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRAV8-3A0A0A6YYJ7 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRAV8-3A0A0A6YYJ7 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
TRAV8-3A0A0A6YYJ7 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
TRAV8-3A0A0A6YYJ7 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRAV8-3A0A0A6YYJ7 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC16.66■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 15.7 ms