Protein–RNA interactions for Protein: Q9H3R1

NDST4, Bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 4, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDST4Q9H3R1 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
NDST4Q9H3R1 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC26.23■■□□□ 1.79
NDST4Q9H3R1 AC142381.3-201ENST00000568208 1670 ntBASIC26.23■■□□□ 1.79
NDST4Q9H3R1 MIR639-201ENST00000384974 98 ntBASIC26.23■■□□□ 1.79
NDST4Q9H3R1 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC26.23■■□□□ 1.79
NDST4Q9H3R1 AC022211.4-201ENST00000625094 2161 ntBASIC26.23■■□□□ 1.79
NDST4Q9H3R1 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
NDST4Q9H3R1 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
NDST4Q9H3R1 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC26.22■■□□□ 1.79
NDST4Q9H3R1 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC26.22■■□□□ 1.79
NDST4Q9H3R1 MED17-227ENST00000640521 2047 ntTSL 5 BASIC26.22■■□□□ 1.79
NDST4Q9H3R1 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
NDST4Q9H3R1 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
NDST4Q9H3R1 RPS2-202ENST00000526522 924 ntTSL 2 BASIC26.21■■□□□ 1.79
NDST4Q9H3R1 MOB2-207ENST00000614710 705 ntTSL 5 BASIC26.21■■□□□ 1.79
NDST4Q9H3R1 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC26.21■■□□□ 1.79
NDST4Q9H3R1 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
NDST4Q9H3R1 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC26.2■■□□□ 1.79
NDST4Q9H3R1 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
NDST4Q9H3R1 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
NDST4Q9H3R1 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
NDST4Q9H3R1 AC025884.2-201ENST00000553429 711 ntBASIC26.2■■□□□ 1.78
NDST4Q9H3R1 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC26.2■■□□□ 1.78
NDST4Q9H3R1 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
NDST4Q9H3R1 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC26.19■■□□□ 1.78
NDST4Q9H3R1 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC26.19■■□□□ 1.78
NDST4Q9H3R1 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
NDST4Q9H3R1 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC26.19■■□□□ 1.78
NDST4Q9H3R1 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
NDST4Q9H3R1 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
NDST4Q9H3R1 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
NDST4Q9H3R1 PFN2-211ENST00000489155 636 ntTSL 4 BASIC26.18■■□□□ 1.78
NDST4Q9H3R1 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC26.18■■□□□ 1.78
NDST4Q9H3R1 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
NDST4Q9H3R1 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
NDST4Q9H3R1 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
NDST4Q9H3R1 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
NDST4Q9H3R1 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC26.17■■□□□ 1.78
NDST4Q9H3R1 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
NDST4Q9H3R1 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
NDST4Q9H3R1 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC26.17■■□□□ 1.78
NDST4Q9H3R1 PKM-204ENST00000449901 2526 ntTSL 2 BASIC26.16■■□□□ 1.78
NDST4Q9H3R1 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC26.16■■□□□ 1.78
NDST4Q9H3R1 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
NDST4Q9H3R1 AC138932.3-201ENST00000567634 1902 ntBASIC26.16■■□□□ 1.78
NDST4Q9H3R1 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
NDST4Q9H3R1 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
NDST4Q9H3R1 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC26.15■■□□□ 1.78
NDST4Q9H3R1 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC26.15■■□□□ 1.78
NDST4Q9H3R1 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC26.14■■□□□ 1.78
NDST4Q9H3R1 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
NDST4Q9H3R1 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
NDST4Q9H3R1 TPT1-202ENST00000379055 948 ntTSL 2 BASIC26.14■■□□□ 1.78
NDST4Q9H3R1 AC092296.2-201ENST00000589470 999 ntBASIC26.14■■□□□ 1.78
NDST4Q9H3R1 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC26.14■■□□□ 1.78
NDST4Q9H3R1 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC26.14■■□□□ 1.77
NDST4Q9H3R1 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC26.13■■□□□ 1.77
NDST4Q9H3R1 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC26.13■■□□□ 1.77
NDST4Q9H3R1 AC093323.1-202ENST00000635031 2045 ntBASIC26.13■■□□□ 1.77
NDST4Q9H3R1 AC097639.1-201ENST00000565519 1891 ntBASIC26.13■■□□□ 1.77
NDST4Q9H3R1 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC26.13■■□□□ 1.77
NDST4Q9H3R1 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
NDST4Q9H3R1 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC26.12■■□□□ 1.77
NDST4Q9H3R1 SMPD5-203ENST00000639008 1464 ntBASIC26.12■■□□□ 1.77
NDST4Q9H3R1 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
NDST4Q9H3R1 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
NDST4Q9H3R1 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
NDST4Q9H3R1 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC26.12■■□□□ 1.77
NDST4Q9H3R1 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
NDST4Q9H3R1 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC26.11■■□□□ 1.77
NDST4Q9H3R1 MIR3960-201ENST00000583311 91 ntBASIC26.11■■□□□ 1.77
NDST4Q9H3R1 SRP68-213ENST00000629930 165 ntTSL 5 BASIC26.11■■□□□ 1.77
NDST4Q9H3R1 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC26.11■■□□□ 1.77
NDST4Q9H3R1 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC26.1■■□□□ 1.77
NDST4Q9H3R1 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC26.1■■□□□ 1.77
NDST4Q9H3R1 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
NDST4Q9H3R1 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
NDST4Q9H3R1 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC26.09■■□□□ 1.77
NDST4Q9H3R1 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
NDST4Q9H3R1 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
NDST4Q9H3R1 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
NDST4Q9H3R1 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC26.08■■□□□ 1.77
NDST4Q9H3R1 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC26.08■■□□□ 1.77
NDST4Q9H3R1 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC26.08■■□□□ 1.77
NDST4Q9H3R1 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC26.08■■□□□ 1.77
NDST4Q9H3R1 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
NDST4Q9H3R1 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
NDST4Q9H3R1 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC26.07■■□□□ 1.76
NDST4Q9H3R1 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC26.07■■□□□ 1.76
NDST4Q9H3R1 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC26.07■■□□□ 1.76
NDST4Q9H3R1 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
NDST4Q9H3R1 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC26.06■■□□□ 1.76
NDST4Q9H3R1 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
NDST4Q9H3R1 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
NDST4Q9H3R1 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
NDST4Q9H3R1 AC022413.1-201ENST00000624602 984 ntBASIC26.06■■□□□ 1.76
NDST4Q9H3R1 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
NDST4Q9H3R1 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
NDST4Q9H3R1 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
NDST4Q9H3R1 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC26.06■■□□□ 1.76
Retrieved 100 of 98,524 protein–RNA pairs in 73.2 ms