Protein–RNA interactions for Protein: Q9H1C7

CYSTM1, Cysteine-rich and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1Q9H1C7 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CYSTM1Q9H1C7 PALM-208ENST00000592155 2272 ntTSL 4 BASIC14.27□□□□□ -0.12
CYSTM1Q9H1C7 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CYSTM1Q9H1C7 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CYSTM1Q9H1C7 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
CYSTM1Q9H1C7 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
CYSTM1Q9H1C7 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CYSTM1Q9H1C7 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CYSTM1Q9H1C7 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
CYSTM1Q9H1C7 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CYSTM1Q9H1C7 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CYSTM1Q9H1C7 WWC2-AS2-201ENST00000578387 2183 ntBASIC14.26□□□□□ -0.13
CYSTM1Q9H1C7 LINC01124-201ENST00000409786 2117 ntBASIC14.26□□□□□ -0.13
CYSTM1Q9H1C7 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC14.26□□□□□ -0.13
CYSTM1Q9H1C7 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CYSTM1Q9H1C7 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CYSTM1Q9H1C7 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC14.26□□□□□ -0.13
CYSTM1Q9H1C7 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
CYSTM1Q9H1C7 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC14.26□□□□□ -0.13
CYSTM1Q9H1C7 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
CYSTM1Q9H1C7 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CYSTM1Q9H1C7 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CYSTM1Q9H1C7 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC14.25□□□□□ -0.13
CYSTM1Q9H1C7 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
CYSTM1Q9H1C7 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC14.25□□□□□ -0.13
CYSTM1Q9H1C7 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CYSTM1Q9H1C7 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
CYSTM1Q9H1C7 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC14.25□□□□□ -0.13
CYSTM1Q9H1C7 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC14.25□□□□□ -0.13
CYSTM1Q9H1C7 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CYSTM1Q9H1C7 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
CYSTM1Q9H1C7 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CYSTM1Q9H1C7 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
CYSTM1Q9H1C7 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CYSTM1Q9H1C7 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC14.24□□□□□ -0.13
CYSTM1Q9H1C7 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CYSTM1Q9H1C7 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CYSTM1Q9H1C7 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CYSTM1Q9H1C7 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CYSTM1Q9H1C7 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
CYSTM1Q9H1C7 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CYSTM1Q9H1C7 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CYSTM1Q9H1C7 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
CYSTM1Q9H1C7 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CYSTM1Q9H1C7 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
CYSTM1Q9H1C7 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CYSTM1Q9H1C7 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
CYSTM1Q9H1C7 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
CYSTM1Q9H1C7 GALC-202ENST00000393568 2054 ntTSL 2 BASIC14.23□□□□□ -0.13
CYSTM1Q9H1C7 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CYSTM1Q9H1C7 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC14.23□□□□□ -0.13
CYSTM1Q9H1C7 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CYSTM1Q9H1C7 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CYSTM1Q9H1C7 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CYSTM1Q9H1C7 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CYSTM1Q9H1C7 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC14.23□□□□□ -0.13
CYSTM1Q9H1C7 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
CYSTM1Q9H1C7 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CYSTM1Q9H1C7 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CYSTM1Q9H1C7 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC14.22□□□□□ -0.13
CYSTM1Q9H1C7 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CYSTM1Q9H1C7 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CYSTM1Q9H1C7 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
CYSTM1Q9H1C7 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
CYSTM1Q9H1C7 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CYSTM1Q9H1C7 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CYSTM1Q9H1C7 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CYSTM1Q9H1C7 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC14.22□□□□□ -0.13
CYSTM1Q9H1C7 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
CYSTM1Q9H1C7 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CYSTM1Q9H1C7 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CYSTM1Q9H1C7 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CYSTM1Q9H1C7 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CYSTM1Q9H1C7 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC14.21□□□□□ -0.13
CYSTM1Q9H1C7 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CYSTM1Q9H1C7 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC14.21□□□□□ -0.13
CYSTM1Q9H1C7 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
CYSTM1Q9H1C7 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CYSTM1Q9H1C7 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
CYSTM1Q9H1C7 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
CYSTM1Q9H1C7 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
CYSTM1Q9H1C7 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
CYSTM1Q9H1C7 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC14.2□□□□□ -0.14
CYSTM1Q9H1C7 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC14.2□□□□□ -0.14
CYSTM1Q9H1C7 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC14.2□□□□□ -0.14
CYSTM1Q9H1C7 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CYSTM1Q9H1C7 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CYSTM1Q9H1C7 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
CYSTM1Q9H1C7 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CYSTM1Q9H1C7 AC137767.1-201ENST00000602918 1920 ntBASIC14.19□□□□□ -0.14
CYSTM1Q9H1C7 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CYSTM1Q9H1C7 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC14.19□□□□□ -0.14
CYSTM1Q9H1C7 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
CYSTM1Q9H1C7 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC14.19□□□□□ -0.14
CYSTM1Q9H1C7 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CYSTM1Q9H1C7 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CYSTM1Q9H1C7 EML3-217ENST00000531557 2509 ntTSL 5 BASIC14.19□□□□□ -0.14
CYSTM1Q9H1C7 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CYSTM1Q9H1C7 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
CYSTM1Q9H1C7 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms