Protein–RNA interactions for Protein: Q9H1C7

CYSTM1, Cysteine-rich and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1Q9H1C7 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
CYSTM1Q9H1C7 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
CYSTM1Q9H1C7 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
CYSTM1Q9H1C7 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CYSTM1Q9H1C7 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CYSTM1Q9H1C7 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC20.05■□□□□ 0.8
CYSTM1Q9H1C7 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
CYSTM1Q9H1C7 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
CYSTM1Q9H1C7 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CYSTM1Q9H1C7 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.74
CYSTM1Q9H1C7 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CYSTM1Q9H1C7 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CYSTM1Q9H1C7 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
CYSTM1Q9H1C7 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC19.47■□□□□ 0.71
CYSTM1Q9H1C7 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CYSTM1Q9H1C7 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CYSTM1Q9H1C7 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CYSTM1Q9H1C7 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
CYSTM1Q9H1C7 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CYSTM1Q9H1C7 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CYSTM1Q9H1C7 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CYSTM1Q9H1C7 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CYSTM1Q9H1C7 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CYSTM1Q9H1C7 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
CYSTM1Q9H1C7 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC18.84■□□□□ 0.61
CYSTM1Q9H1C7 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
CYSTM1Q9H1C7 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CYSTM1Q9H1C7 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CYSTM1Q9H1C7 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CYSTM1Q9H1C7 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
CYSTM1Q9H1C7 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC18.69■□□□□ 0.58
CYSTM1Q9H1C7 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
CYSTM1Q9H1C7 ST7-205ENST00000393446 2114 ntTSL 5 BASIC18.65■□□□□ 0.58
CYSTM1Q9H1C7 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC18.61■□□□□ 0.57
CYSTM1Q9H1C7 ST7-202ENST00000323984 2142 ntTSL 5 BASIC18.61■□□□□ 0.57
CYSTM1Q9H1C7 ST7-207ENST00000393449 2127 ntTSL 5 BASIC18.61■□□□□ 0.57
CYSTM1Q9H1C7 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CYSTM1Q9H1C7 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
CYSTM1Q9H1C7 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC18.53■□□□□ 0.56
CYSTM1Q9H1C7 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CYSTM1Q9H1C7 AL161658.1-201ENST00000623641 1967 ntBASIC18.46■□□□□ 0.55
CYSTM1Q9H1C7 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CYSTM1Q9H1C7 AC139426.1-201ENST00000568218 2529 ntBASIC18.4■□□□□ 0.54
CYSTM1Q9H1C7 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
CYSTM1Q9H1C7 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CYSTM1Q9H1C7 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CYSTM1Q9H1C7 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CYSTM1Q9H1C7 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC18.37■□□□□ 0.53
CYSTM1Q9H1C7 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CYSTM1Q9H1C7 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CYSTM1Q9H1C7 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC18.26■□□□□ 0.51
CYSTM1Q9H1C7 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CYSTM1Q9H1C7 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
CYSTM1Q9H1C7 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CYSTM1Q9H1C7 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
CYSTM1Q9H1C7 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CYSTM1Q9H1C7 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
CYSTM1Q9H1C7 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CYSTM1Q9H1C7 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
CYSTM1Q9H1C7 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CYSTM1Q9H1C7 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CYSTM1Q9H1C7 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CYSTM1Q9H1C7 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC18.01■□□□□ 0.47
CYSTM1Q9H1C7 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CYSTM1Q9H1C7 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CYSTM1Q9H1C7 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CYSTM1Q9H1C7 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CYSTM1Q9H1C7 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CYSTM1Q9H1C7 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CYSTM1Q9H1C7 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC17.89■□□□□ 0.45
CYSTM1Q9H1C7 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
CYSTM1Q9H1C7 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
CYSTM1Q9H1C7 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
CYSTM1Q9H1C7 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC17.86■□□□□ 0.45
CYSTM1Q9H1C7 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CYSTM1Q9H1C7 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CYSTM1Q9H1C7 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC17.81■□□□□ 0.44
CYSTM1Q9H1C7 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CYSTM1Q9H1C7 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CYSTM1Q9H1C7 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CYSTM1Q9H1C7 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CYSTM1Q9H1C7 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CYSTM1Q9H1C7 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CYSTM1Q9H1C7 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CYSTM1Q9H1C7 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CYSTM1Q9H1C7 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
CYSTM1Q9H1C7 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CYSTM1Q9H1C7 HES6-203ENST00000409160 1600 ntTSL 2 BASIC17.66■□□□□ 0.42
CYSTM1Q9H1C7 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CYSTM1Q9H1C7 AC135731.1-201ENST00000569415 2548 ntBASIC17.63■□□□□ 0.41
CYSTM1Q9H1C7 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
CYSTM1Q9H1C7 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CYSTM1Q9H1C7 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC17.59■□□□□ 0.41
CYSTM1Q9H1C7 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC17.57■□□□□ 0.4
CYSTM1Q9H1C7 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
CYSTM1Q9H1C7 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CYSTM1Q9H1C7 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
CYSTM1Q9H1C7 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
CYSTM1Q9H1C7 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CYSTM1Q9H1C7 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 15.1 ms