RNA–Protein interactions for RNA: ENST00000440884.7

MARK3-206, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 1 (best) BASIC

Gene MARK3, Length 2,643 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-206ENST00000440884 NISCHQ9Y2I1 1504 aa40.43■■■■■ 4.06
MARK3-206ENST00000440884 SHROOM4Q9ULL8 1493 aa35.15■■■■□ 3.22
MARK3-206ENST00000440884 SUPT5HO00267 1087 aaKnown RBP34.74■■■■□ 3.15
MARK3-206ENST00000440884 ZCCHC6Q5VYS8 1495 aaKnown RBP34.31■■■■□ 3.08
MARK3-206ENST00000440884 MYO15BQ96JP2 1530 aa34.14■■■■□ 3.06
MARK3-206ENST00000440884 HRCP23327 699 aa34.08■■■■□ 3.05
MARK3-206ENST00000440884 CHIC1Q5VXU3 224 aa34.03■■■■□ 3.04
MARK3-206ENST00000440884 CCDC180Q9P1Z9 1646 aa33.97■■■■□ 3.03
MARK3-206ENST00000440884 PCGF6Q9BYE7 350 aa33.68■■■□□ 2.98
MARK3-206ENST00000440884 DCAF8L2P0C7V8 631 aa33.52■■■□□ 2.96
MARK3-206ENST00000440884 PPARGC1BQ86YN6 1023 aaKnown RBP33.4■■■□□ 2.94
MARK3-206ENST00000440884 DCAF1Q9Y4B6 1507 aa33.25■■■□□ 2.91
MARK3-206ENST00000440884 LOC105371045A0A1W2PR82 267 aa33.14■■■□□ 2.9
MARK3-206ENST00000440884 TRIM26Q12899 539 aaPredicted RBP32.8■■■□□ 2.84
MARK3-206ENST00000440884 ABCC9O60706 1549 aa32.52■■■□□ 2.8
MARK3-206ENST00000440884 ZEB1P37275 1124 aaPredicted RBP32.29■■■□□ 2.76
MARK3-206ENST00000440884 RSF1Q96T23 1441 aaPredicted RBP32.29■■■□□ 2.76
MARK3-206ENST00000440884 TRIM41Q8WV44 630 aa32.23■■■□□ 2.75
MARK3-206ENST00000440884 SCRIBQ14160 1630 aa32.13■■■□□ 2.73
MARK3-206ENST00000440884 FAM9AQ8IZU1 332 aaPredicted RBP32.11■■■□□ 2.73
MARK3-206ENST00000440884 RB1CC1Q8TDY2 1594 aa32.09■■■□□ 2.73
MARK3-206ENST00000440884 EHMT2Q96KQ7 1210 aa31.91■■■□□ 2.7
MARK3-206ENST00000440884 SCAF1Q9H7N4 1312 aaKnown RBP31.87■■■□□ 2.69
MARK3-206ENST00000440884 PELP1Q8IZL8 1130 aaKnown RBP31.8■■■□□ 2.68
MARK3-206ENST00000440884 CECR2Q9BXF3 1484 aa31.6■■■□□ 2.65
MARK3-206ENST00000440884 MROH2BQ7Z745 1585 aa31.53■■■□□ 2.64
MARK3-206ENST00000440884 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.46■■■□□ 2.63
MARK3-206ENST00000440884 NACADO15069 1562 aa31.45■■■□□ 2.63
MARK3-206ENST00000440884 WIZO95785 1651 aa31.42■■■□□ 2.62
MARK3-206ENST00000440884 CCER1Q8TC90 406 aaPredicted RBP31.36■■■□□ 2.61
MARK3-206ENST00000440884 ACIN1Q9UKV3 1341 aaKnown RBP31.29■■■□□ 2.6
MARK3-206ENST00000440884 NEUROD1Q13562 356 aa31.24■■■□□ 2.59
MARK3-206ENST00000440884 EIF4G1Q04637 1599 aaKnown RBP31.22■■■□□ 2.59
MARK3-206ENST00000440884 BAZ1AQ9NRL2 1556 aaPredicted RBP31.19■■■□□ 2.58
MARK3-206ENST00000440884 DIEXFQ68CQ4 756 aaKnown RBP31.11■■■□□ 2.57
MARK3-206ENST00000440884 TTBK1Q5TCY1 1321 aaPredicted RBP31.04■■■□□ 2.56
MARK3-206ENST00000440884 WRNQ14191 1432 aaPredicted RBP eCLIP31.01■■■□□ 2.56
MARK3-206ENST00000440884 ABCC8Q09428 1581 aa30.98■■■□□ 2.55
MARK3-206ENST00000440884 GTF3C3Q9Y5Q9 886 aa30.98■■■□□ 2.55
MARK3-206ENST00000440884 CCDC88BA6NC98 1476 aa30.96■■■□□ 2.55
MARK3-206ENST00000440884 CENPBP07199 599 aaPredicted RBP30.94■■■□□ 2.54
MARK3-206ENST00000440884 CEP162Q5TB80 1403 aa30.93■■■□□ 2.54
MARK3-206ENST00000440884 TOP2AP11388 1531 aaKnown RBP30.83■■■□□ 2.53
MARK3-206ENST00000440884 SOGA1O94964 1423 aa30.81■■■□□ 2.52
MARK3-206ENST00000440884 TNIKQ9UKE5 1360 aa30.79■■■□□ 2.52
MARK3-206ENST00000440884 SMARCA2P51531 1590 aa30.73■■■□□ 2.51
MARK3-206ENST00000440884 ZNF316A6NFI3 1004 aaPredicted RBP30.68■■■□□ 2.5
MARK3-206ENST00000440884 SMARCA4P51532 1647 aa30.67■■■□□ 2.5
MARK3-206ENST00000440884 RUSC2Q8N2Y8 1516 aa30.66■■■□□ 2.5
MARK3-206ENST00000440884 CSRNP3Q8WYN3 585 aa30.64■■■□□ 2.5
MARK3-206ENST00000440884 UBTFP17480 764 aaKnown RBP30.63■■■□□ 2.49
MARK3-206ENST00000440884 UNC13AQ9UPW8 1703 aa30.6■■■□□ 2.49
MARK3-206ENST00000440884 EEA1Q15075 1411 aa30.59■■■□□ 2.49
MARK3-206ENST00000440884 YTHDC1Q96MU7 727 aaKnown RBP30.5■■■□□ 2.47
MARK3-206ENST00000440884 GOLGA3Q08378 1498 aa30.49■■■□□ 2.47
MARK3-206ENST00000440884 MIER1Q8N108 512 aa30.4■■■□□ 2.46
MARK3-206ENST00000440884 HNRNPUL2Q1KMD3 747 aaKnown RBP30.39■■■□□ 2.45
MARK3-206ENST00000440884 PABPN1Q86U42 306 aaKnown RBP eCLIP30.33■■■□□ 2.45
MARK3-206ENST00000440884 MYT1Q01538 1121 aa30.33■■■□□ 2.45
MARK3-206ENST00000440884 BICRAQ9NZM4 1560 aa30.25■■■□□ 2.43
MARK3-206ENST00000440884 CEP164Q9UPV0 1460 aa30.24■■■□□ 2.43
MARK3-206ENST00000440884 CLIP1P30622 1438 aa30.2■■■□□ 2.43
MARK3-206ENST00000440884 KIF21BO75037 1637 aa30.2■■■□□ 2.42
MARK3-206ENST00000440884 SYNJ1O43426 1573 aa30.17■■■□□ 2.42
MARK3-206ENST00000440884 VPS8Q8N3P4 1428 aa30.14■■■□□ 2.42
MARK3-206ENST00000440884 APLP2Q06481 763 aa30.03■■■□□ 2.4
MARK3-206ENST00000440884 RAPGEF2Q9Y4G8 1499 aa30.01■■■□□ 2.39
MARK3-206ENST00000440884 BAZ1BQ9UIG0 1483 aaKnown RBP29.99■■■□□ 2.39
MARK3-206ENST00000440884 PEG3Q9GZU2 1588 aa29.97■■■□□ 2.39
MARK3-206ENST00000440884 RANGAP1P46060 587 aaPredicted RBP29.97■■■□□ 2.39
MARK3-206ENST00000440884 DHX57Q6P158 1386 aaKnown RBP29.82■■■□□ 2.37
MARK3-206ENST00000440884 CLSPNQ9HAW4 1339 aa29.79■■■□□ 2.36
MARK3-206ENST00000440884 ATAD2BQ9ULI0 1458 aa29.73■■■□□ 2.35
MARK3-206ENST00000440884 SUPT16HQ9Y5B9 1047 aaKnown RBP29.68■■■□□ 2.34
MARK3-206ENST00000440884 TOP2BQ02880 1626 aa29.67■■■□□ 2.34
MARK3-206ENST00000440884 ARAP1Q96P48 1450 aa29.66■■■□□ 2.34
MARK3-206ENST00000440884 KANK4Q5T7N3 995 aaPredicted RBP29.66■■■□□ 2.34
MARK3-206ENST00000440884 ERICH3Q5RHP9 1530 aa29.58■■■□□ 2.33
MARK3-206ENST00000440884 PRXQ9BXM0 1461 aa29.57■■■□□ 2.32
MARK3-206ENST00000440884 BIVM-ERCC5R4GMW8 1640 aa29.54■■■□□ 2.32
MARK3-206ENST00000440884 RRBP1Q9P2E9 1410 aaKnown RBP29.53■■■□□ 2.32
MARK3-206ENST00000440884 CUX2O14529 1486 aa29.44■■■□□ 2.3
MARK3-206ENST00000440884 CCNB3Q8WWL7 1395 aa29.39■■■□□ 2.3
MARK3-206ENST00000440884 TSHZ2Q9NRE2 1034 aa29.37■■■□□ 2.29
MARK3-206ENST00000440884 ITGAEP38570 1179 aa29.35■■■□□ 2.29
MARK3-206ENST00000440884 KCNH8Q96L42 1107 aa29.34■■■□□ 2.29
MARK3-206ENST00000440884 CUX1P39880 1505 aa29.3■■■□□ 2.28
MARK3-206ENST00000440884 ARHGAP35Q9NRY4 1499 aa29.29■■■□□ 2.28
MARK3-206ENST00000440884 KIF27Q86VH2 1401 aa29.27■■■□□ 2.28
MARK3-206ENST00000440884 RAB3GAP2Q9H2M9 1393 aa29.24■■■□□ 2.27
MARK3-206ENST00000440884 MAPKBP1O60336 1514 aa29.24■■■□□ 2.27
MARK3-206ENST00000440884 BCANQ96GW7 911 aa29.1■■■□□ 2.25
MARK3-206ENST00000440884 NCAPD3P42695 1498 aa29.1■■■□□ 2.25
MARK3-206ENST00000440884 ANP32EQ9BTT0 268 aa29.08■■■□□ 2.25
MARK3-206ENST00000440884 DDX10Q13206 875 aaKnown RBP29.07■■■□□ 2.24
MARK3-206ENST00000440884 WDR97A6NE52 1622 aa29.07■■■□□ 2.24
MARK3-206ENST00000440884 TIAM1Q13009 1591 aa29.07■■■□□ 2.24
MARK3-206ENST00000440884 SETD5Q9C0A6 1442 aa29.07■■■□□ 2.24
MARK3-206ENST00000440884 HMGXB3Q12766 1538 aa29.05■■■□□ 2.24
MARK3-206ENST00000440884 SIN3AQ96ST3 1273 aa29.04■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms