RNA–Protein interactions for RNA: ENST00000524115.2

NKX6-3-202, Transcript of NK6 homeobox 3, humanhuman

TSL 2 BASIC

Gene NKX6-3, Length 1,683 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-3-202ENST00000524115 NISCHQ9Y2I1 1504 aa49.78■■■■■ 5.56
NKX6-3-202ENST00000524115 CCDC180Q9P1Z9 1646 aa44.23■■■■■ 4.67
NKX6-3-202ENST00000524115 ABCC9O60706 1549 aa43.82■■■■■ 4.61
NKX6-3-202ENST00000524115 DCAF8L2P0C7V8 631 aa41.91■■■■■ 4.3
NKX6-3-202ENST00000524115 RB1CC1Q8TDY2 1594 aa41.9■■■■■ 4.3
NKX6-3-202ENST00000524115 NACADO15069 1562 aa41.79■■■■■ 4.28
NKX6-3-202ENST00000524115 MYO15BQ96JP2 1530 aa41.44■■■■■ 4.22
NKX6-3-202ENST00000524115 ZCCHC6Q5VYS8 1495 aaKnown RBP41.37■■■■■ 4.21
NKX6-3-202ENST00000524115 DCAF1Q9Y4B6 1507 aa41.12■■■■■ 4.17
NKX6-3-202ENST00000524115 PABPN1Q86U42 306 aaKnown RBP eCLIP41.01■■■■■ 4.15
NKX6-3-202ENST00000524115 UNC13AQ9UPW8 1703 aa40.77■■■■■ 4.12
NKX6-3-202ENST00000524115 DNAJC5BQ9UF47 199 aa40.67■■■■■ 4.1
NKX6-3-202ENST00000524115 BICRAQ9NZM4 1560 aa40.66■■■■■ 4.1
NKX6-3-202ENST00000524115 SCRIBQ14160 1630 aa40.43■■■■■ 4.06
NKX6-3-202ENST00000524115 SHROOM4Q9ULL8 1493 aa40.18■■■■■ 4.02
NKX6-3-202ENST00000524115 EIF4G1Q04637 1599 aaKnown RBP39.62■■■■□ 3.93
NKX6-3-202ENST00000524115 CC2D2AQ9P2K1 1620 aa39.54■■■■□ 3.92
NKX6-3-202ENST00000524115 CECR2Q9BXF3 1484 aa39.41■■■■□ 3.9
NKX6-3-202ENST00000524115 SUPT5HO00267 1087 aaKnown RBP38.69■■■■□ 3.78
NKX6-3-202ENST00000524115 NCAPD3P42695 1498 aa38.65■■■■□ 3.78
NKX6-3-202ENST00000524115 SMARCA4P51532 1647 aa38.63■■■■□ 3.77
NKX6-3-202ENST00000524115 ATAD2BQ9ULI0 1458 aa38.61■■■■□ 3.77
NKX6-3-202ENST00000524115 BAZ1AQ9NRL2 1556 aaPredicted RBP38.56■■■■□ 3.76
NKX6-3-202ENST00000524115 SMARCA2P51531 1590 aa38.48■■■■□ 3.75
NKX6-3-202ENST00000524115 MROH2BQ7Z745 1585 aa38.37■■■■□ 3.73
NKX6-3-202ENST00000524115 HMGXB3Q12766 1538 aa38.32■■■■□ 3.73
NKX6-3-202ENST00000524115 PEG3Q9GZU2 1588 aa38.26■■■■□ 3.72
NKX6-3-202ENST00000524115 BAZ1BQ9UIG0 1483 aaKnown RBP38.24■■■■□ 3.71
NKX6-3-202ENST00000524115 RSF1Q96T23 1441 aaPredicted RBP37.86■■■■□ 3.65
NKX6-3-202ENST00000524115 WIZO95785 1651 aa37.86■■■■□ 3.65
NKX6-3-202ENST00000524115 NESP48681 1621 aa37.82■■■■□ 3.64
NKX6-3-202ENST00000524115 ERCC6Q03468 1493 aa37.79■■■■□ 3.64
NKX6-3-202ENST00000524115 CHIC1Q5VXU3 224 aa37.72■■■■□ 3.63
NKX6-3-202ENST00000524115 LAMC3Q9Y6N6 1575 aa37.58■■■■□ 3.61
NKX6-3-202ENST00000524115 CADPSQ9ULU8 1353 aa37.54■■■■□ 3.6
NKX6-3-202ENST00000524115 CUX2O14529 1486 aa37.48■■■■□ 3.59
NKX6-3-202ENST00000524115 TOP2AP11388 1531 aaKnown RBP37.46■■■■□ 3.59
NKX6-3-202ENST00000524115 PDS5BQ9NTI5 1447 aa37.45■■■■□ 3.58
NKX6-3-202ENST00000524115 CFTRP13569 1480 aa37.2■■■■□ 3.55
NKX6-3-202ENST00000524115 THOC2Q8NI27 1593 aaKnown RBP37.19■■■■□ 3.54
NKX6-3-202ENST00000524115 KIF21AQ7Z4S6 1674 aa37.19■■■■□ 3.54
NKX6-3-202ENST00000524115 CCDC88BA6NC98 1476 aa37.11■■■■□ 3.53
NKX6-3-202ENST00000524115 FANCD2Q9BXW9 1451 aa37.06■■■■□ 3.52
NKX6-3-202ENST00000524115 MRC2Q9UBG0 1479 aa37.04■■■■□ 3.52
NKX6-3-202ENST00000524115 CEP164Q9UPV0 1460 aa37.01■■■■□ 3.52
NKX6-3-202ENST00000524115 WDR62O43379 1518 aa36.89■■■■□ 3.5
NKX6-3-202ENST00000524115 DNAJC5Q9H3Z4 198 aa36.88■■■■□ 3.49
NKX6-3-202ENST00000524115 URB2Q14146 1524 aaKnown RBP36.7■■■■□ 3.46
NKX6-3-202ENST00000524115 PRDM2Q13029 1718 aa36.59■■■■□ 3.45
NKX6-3-202ENST00000524115 TOPBP1Q92547 1522 aa36.41■■■■□ 3.42
NKX6-3-202ENST00000524115 TRIM41Q8WV44 630 aa36.38■■■■□ 3.41
NKX6-3-202ENST00000524115 ABCC8Q09428 1581 aa36.37■■■■□ 3.41
NKX6-3-202ENST00000524115 DNMBPQ6XZF7 1577 aa36.28■■■■□ 3.4
NKX6-3-202ENST00000524115 IFT140Q96RY7 1462 aa36.27■■■■□ 3.4
NKX6-3-202ENST00000524115 LOC105371045A0A1W2PR82 267 aa36.25■■■■□ 3.39
NKX6-3-202ENST00000524115 ZNF608Q9ULD9 1512 aaPredicted RBP36.17■■■■□ 3.38
NKX6-3-202ENST00000524115 POLA1P09884 1462 aaPredicted RBP36.08■■■■□ 3.37
NKX6-3-202ENST00000524115 HRCP23327 699 aa36.05■■■■□ 3.36
NKX6-3-202ENST00000524115 CUX1P39880 1505 aa36■■■■□ 3.35
NKX6-3-202ENST00000524115 OSCARQ8IYS5 282 aa36■■■■□ 3.35
NKX6-3-202ENST00000524115 SOGA1O94964 1423 aa35.99■■■■□ 3.35
NKX6-3-202ENST00000524115 PCGF6Q9BYE7 350 aa35.98■■■■□ 3.35
NKX6-3-202ENST00000524115 RAD54L2Q9Y4B4 1467 aa35.98■■■■□ 3.35
NKX6-3-202ENST00000524115 TARBP1Q13395 1621 aaKnown RBP35.97■■■■□ 3.35
NKX6-3-202ENST00000524115 AQRO60306 1485 aaKnown RBP eCLIP35.95■■■■□ 3.35
NKX6-3-202ENST00000524115 FGD5Q6ZNL6 1462 aa35.95■■■■□ 3.34
NKX6-3-202ENST00000524115 EIF4G3O43432 1585 aaKnown RBP35.88■■■■□ 3.33
NKX6-3-202ENST00000524115 TDRD9Q8NDG6 1382 aaKnown RBP35.86■■■■□ 3.33
NKX6-3-202ENST00000524115 TRIM26Q12899 539 aaPredicted RBP35.8■■■■□ 3.32
NKX6-3-202ENST00000524115 WRNQ14191 1432 aaPredicted RBP eCLIP35.68■■■■□ 3.3
NKX6-3-202ENST00000524115 FBLN2P98095 1184 aa35.65■■■■□ 3.3
NKX6-3-202ENST00000524115 FAM9AQ8IZU1 332 aaPredicted RBP35.63■■■■□ 3.29
NKX6-3-202ENST00000524115 WDR97A6NE52 1622 aa35.62■■■■□ 3.29
NKX6-3-202ENST00000524115 ABCA10Q8WWZ4 1543 aa35.58■■■■□ 3.29
NKX6-3-202ENST00000524115 GRIN2BQ13224 1484 aa35.56■■■■□ 3.28
NKX6-3-202ENST00000524115 SNAPC4Q5SXM2 1469 aa35.55■■■■□ 3.28
NKX6-3-202ENST00000524115 TOP2BQ02880 1626 aa35.54■■■■□ 3.28
NKX6-3-202ENST00000524115 SYNJ1O43426 1573 aa35.53■■■■□ 3.28
NKX6-3-202ENST00000524115 GAPVD1Q14C86 1478 aa35.52■■■■□ 3.28
NKX6-3-202ENST00000524115 BIVM-ERCC5R4GMW8 1640 aa35.49■■■■□ 3.27
NKX6-3-202ENST00000524115 CHMP7Q8WUX9 453 aaPredicted RBP35.49■■■■□ 3.27
NKX6-3-202ENST00000524115 MAGI1Q96QZ7 1491 aaPredicted RBP35.47■■■■□ 3.27
NKX6-3-202ENST00000524115 CHD1O14646 1710 aa35.43■■■■□ 3.26
NKX6-3-202ENST00000524115 EEA1Q15075 1411 aa35.4■■■■□ 3.26
NKX6-3-202ENST00000524115 ABCA5Q8WWZ7 1642 aa35.38■■■■□ 3.25
NKX6-3-202ENST00000524115 SYNJ2O15056 1496 aa35.36■■■■□ 3.25
NKX6-3-202ENST00000524115 ARHGEF11O15085 1522 aa35.3■■■■□ 3.24
NKX6-3-202ENST00000524115 PBRM1Q86U86 1689 aa35.27■■■■□ 3.24
NKX6-3-202ENST00000524115 RIMBP3CA6NJZ7 1639 aa35.27■■■■□ 3.24
NKX6-3-202ENST00000524115 RIMBP3BA6NNM3 1639 aa35.27■■■■□ 3.24
NKX6-3-202ENST00000524115 RIMBP3Q9UFD9 1639 aa35.27■■■■□ 3.24
NKX6-3-202ENST00000524115 ZEB1P37275 1124 aaPredicted RBP35.18■■■■□ 3.22
NKX6-3-202ENST00000524115 CLASP1Q7Z460 1538 aa35.15■■■■□ 3.22
NKX6-3-202ENST00000524115 CYB5RLQ6IPT4 315 aa35.13■■■■□ 3.21
NKX6-3-202ENST00000524115 FHAD1B1AJZ9 1412 aa35.12■■■■□ 3.21
NKX6-3-202ENST00000524115 ERICH3Q5RHP9 1530 aa35.11■■■■□ 3.21
NKX6-3-202ENST00000524115 GRIN2AQ12879 1464 aa35.09■■■■□ 3.21
NKX6-3-202ENST00000524115 ADAMTS12P58397 1594 aa35.07■■■■□ 3.21
NKX6-3-202ENST00000524115 TNIKQ9UKE5 1360 aa35.02■■■■□ 3.2
NKX6-3-202ENST00000524115 ARAP1Q96P48 1450 aa35■■■■□ 3.19
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms