RNA–Protein interactions for RNA: ENST00000340729.9

CLPB-202, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

TSL 2 BASIC

Gene CLPB, Length 2,071 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-202ENST00000340729 NISCHQ9Y2I1 1504 aa42.11■■■■■ 4.33
CLPB-202ENST00000340729 CCDC180Q9P1Z9 1646 aa36.4■■■■□ 3.42
CLPB-202ENST00000340729 ZCCHC6Q5VYS8 1495 aaKnown RBP35.53■■■■□ 3.28
CLPB-202ENST00000340729 SHROOM4Q9ULL8 1493 aa35.48■■■■□ 3.27
CLPB-202ENST00000340729 SUPT5HO00267 1087 aaKnown RBP35.07■■■■□ 3.21
CLPB-202ENST00000340729 DCAF1Q9Y4B6 1507 aa34.68■■■■□ 3.14
CLPB-202ENST00000340729 DCAF8L2P0C7V8 631 aa34.68■■■■□ 3.14
CLPB-202ENST00000340729 CHIC1Q5VXU3 224 aa34.57■■■■□ 3.12
CLPB-202ENST00000340729 MYO15BQ96JP2 1530 aa34.56■■■■□ 3.12
CLPB-202ENST00000340729 HRCP23327 699 aa34.48■■■■□ 3.11
CLPB-202ENST00000340729 ABCC9O60706 1549 aa34.02■■■■□ 3.04
CLPB-202ENST00000340729 PCGF6Q9BYE7 350 aa33.89■■■■□ 3.02
CLPB-202ENST00000340729 SCRIBQ14160 1630 aa33.76■■■■□ 3
CLPB-202ENST00000340729 NACADO15069 1562 aa33.69■■■□□ 2.98
CLPB-202ENST00000340729 PPARGC1BQ86YN6 1023 aaKnown RBP33.4■■■□□ 2.94
CLPB-202ENST00000340729 LOC105371045A0A1W2PR82 267 aa33.38■■■□□ 2.93
CLPB-202ENST00000340729 TRIM26Q12899 539 aaPredicted RBP33.33■■■□□ 2.93
CLPB-202ENST00000340729 RB1CC1Q8TDY2 1594 aa33.3■■■□□ 2.92
CLPB-202ENST00000340729 RSF1Q96T23 1441 aaPredicted RBP33.1■■■□□ 2.89
CLPB-202ENST00000340729 ZEB1P37275 1124 aaPredicted RBP32.97■■■□□ 2.87
CLPB-202ENST00000340729 UNC13AQ9UPW8 1703 aa32.95■■■□□ 2.86
CLPB-202ENST00000340729 CECR2Q9BXF3 1484 aa32.8■■■□□ 2.84
CLPB-202ENST00000340729 TRIM41Q8WV44 630 aa32.76■■■□□ 2.83
CLPB-202ENST00000340729 MROH2BQ7Z745 1585 aa32.66■■■□□ 2.82
CLPB-202ENST00000340729 WIZO95785 1651 aa32.5■■■□□ 2.79
CLPB-202ENST00000340729 BAZ1AQ9NRL2 1556 aaPredicted RBP32.44■■■□□ 2.78
CLPB-202ENST00000340729 BICRAQ9NZM4 1560 aa32.43■■■□□ 2.78
CLPB-202ENST00000340729 FAM9AQ8IZU1 332 aaPredicted RBP32.31■■■□□ 2.76
CLPB-202ENST00000340729 SMARCA4P51532 1647 aa32.31■■■□□ 2.76
CLPB-202ENST00000340729 PELP1Q8IZL8 1130 aaKnown RBP32.3■■■□□ 2.76
CLPB-202ENST00000340729 PABPN1Q86U42 306 aaKnown RBP eCLIP32.22■■■□□ 2.75
CLPB-202ENST00000340729 EIF4G1Q04637 1599 aaKnown RBP32.15■■■□□ 2.74
CLPB-202ENST00000340729 TOP2AP11388 1531 aaKnown RBP32.03■■■□□ 2.72
CLPB-202ENST00000340729 SCAF1Q9H7N4 1312 aaKnown RBP32.01■■■□□ 2.71
CLPB-202ENST00000340729 WRNQ14191 1432 aaPredicted RBP eCLIP31.85■■■□□ 2.69
CLPB-202ENST00000340729 EHMT2Q96KQ7 1210 aa31.84■■■□□ 2.69
CLPB-202ENST00000340729 SMARCA2P51531 1590 aa31.81■■■□□ 2.68
CLPB-202ENST00000340729 PEG3Q9GZU2 1588 aa31.78■■■□□ 2.68
CLPB-202ENST00000340729 CCDC88BA6NC98 1476 aa31.74■■■□□ 2.67
CLPB-202ENST00000340729 CCER1Q8TC90 406 aaPredicted RBP31.7■■■□□ 2.67
CLPB-202ENST00000340729 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.68■■■□□ 2.66
CLPB-202ENST00000340729 ACIN1Q9UKV3 1341 aaKnown RBP31.61■■■□□ 2.65
CLPB-202ENST00000340729 EEA1Q15075 1411 aa31.57■■■□□ 2.64
CLPB-202ENST00000340729 CEP162Q5TB80 1403 aa31.57■■■□□ 2.64
CLPB-202ENST00000340729 ABCC8Q09428 1581 aa31.57■■■□□ 2.64
CLPB-202ENST00000340729 TNIKQ9UKE5 1360 aa31.57■■■□□ 2.64
CLPB-202ENST00000340729 ATAD2BQ9ULI0 1458 aa31.56■■■□□ 2.64
CLPB-202ENST00000340729 DIEXFQ68CQ4 756 aaKnown RBP31.44■■■□□ 2.62
CLPB-202ENST00000340729 BAZ1BQ9UIG0 1483 aaKnown RBP31.42■■■□□ 2.62
CLPB-202ENST00000340729 NEUROD1Q13562 356 aa31.42■■■□□ 2.62
CLPB-202ENST00000340729 CENPBP07199 599 aaPredicted RBP31.38■■■□□ 2.61
CLPB-202ENST00000340729 SOGA1O94964 1423 aa31.38■■■□□ 2.61
CLPB-202ENST00000340729 CSRNP3Q8WYN3 585 aa31.29■■■□□ 2.6
CLPB-202ENST00000340729 GOLGA3Q08378 1498 aa31.27■■■□□ 2.6
CLPB-202ENST00000340729 RUSC2Q8N2Y8 1516 aa31.16■■■□□ 2.58
CLPB-202ENST00000340729 HMGXB3Q12766 1538 aa31.15■■■□□ 2.58
CLPB-202ENST00000340729 GTF3C3Q9Y5Q9 886 aa31.15■■■□□ 2.58
CLPB-202ENST00000340729 ZNF316A6NFI3 1004 aaPredicted RBP31.13■■■□□ 2.57
CLPB-202ENST00000340729 KIF21BO75037 1637 aa31.1■■■□□ 2.57
CLPB-202ENST00000340729 NCAPD3P42695 1498 aa31.09■■■□□ 2.57
CLPB-202ENST00000340729 UBTFP17480 764 aaKnown RBP31.07■■■□□ 2.56
CLPB-202ENST00000340729 CEP164Q9UPV0 1460 aa31.06■■■□□ 2.56
CLPB-202ENST00000340729 TTBK1Q5TCY1 1321 aaPredicted RBP31.02■■■□□ 2.56
CLPB-202ENST00000340729 SYNJ1O43426 1573 aa30.95■■■□□ 2.55
CLPB-202ENST00000340729 MYT1Q01538 1121 aa30.9■■■□□ 2.54
CLPB-202ENST00000340729 VPS8Q8N3P4 1428 aa30.88■■■□□ 2.53
CLPB-202ENST00000340729 CLIP1P30622 1438 aa30.86■■■□□ 2.53
CLPB-202ENST00000340729 CC2D2AQ9P2K1 1620 aa30.78■■■□□ 2.52
CLPB-202ENST00000340729 TOP2BQ02880 1626 aa30.67■■■□□ 2.5
CLPB-202ENST00000340729 HNRNPUL2Q1KMD3 747 aaKnown RBP30.66■■■□□ 2.5
CLPB-202ENST00000340729 MIER1Q8N108 512 aa30.65■■■□□ 2.5
CLPB-202ENST00000340729 BIVM-ERCC5R4GMW8 1640 aa30.65■■■□□ 2.5
CLPB-202ENST00000340729 PRDM2Q13029 1718 aa30.65■■■□□ 2.5
CLPB-202ENST00000340729 RAPGEF2Q9Y4G8 1499 aa30.64■■■□□ 2.49
CLPB-202ENST00000340729 CLSPNQ9HAW4 1339 aa30.63■■■□□ 2.49
CLPB-202ENST00000340729 CFTRP13569 1480 aa30.63■■■□□ 2.49
CLPB-202ENST00000340729 APLP2Q06481 763 aa30.58■■■□□ 2.49
CLPB-202ENST00000340729 ERICH3Q5RHP9 1530 aa30.52■■■□□ 2.48
CLPB-202ENST00000340729 YTHDC1Q96MU7 727 aaKnown RBP30.52■■■□□ 2.48
CLPB-202ENST00000340729 CUX1P39880 1505 aa30.49■■■□□ 2.47
CLPB-202ENST00000340729 PRXQ9BXM0 1461 aa30.4■■■□□ 2.46
CLPB-202ENST00000340729 DHX57Q6P158 1386 aaKnown RBP30.38■■■□□ 2.45
CLPB-202ENST00000340729 CADPSQ9ULU8 1353 aa30.36■■■□□ 2.45
CLPB-202ENST00000340729 ARAP1Q96P48 1450 aa30.34■■■□□ 2.45
CLPB-202ENST00000340729 RRBP1Q9P2E9 1410 aaKnown RBP30.29■■■□□ 2.44
CLPB-202ENST00000340729 CUX2O14529 1486 aa30.29■■■□□ 2.44
CLPB-202ENST00000340729 NESP48681 1621 aa30.12■■■□□ 2.41
CLPB-202ENST00000340729 FANCD2Q9BXW9 1451 aa30.11■■■□□ 2.41
CLPB-202ENST00000340729 KANK4Q5T7N3 995 aaPredicted RBP30.09■■■□□ 2.41
CLPB-202ENST00000340729 KIF27Q86VH2 1401 aa30.08■■■□□ 2.41
CLPB-202ENST00000340729 RANGAP1P46060 587 aaPredicted RBP30.07■■■□□ 2.4
CLPB-202ENST00000340729 FGD5Q6ZNL6 1462 aa30.04■■■□□ 2.4
CLPB-202ENST00000340729 CCNB3Q8WWL7 1395 aa30.03■■■□□ 2.4
CLPB-202ENST00000340729 ARHGAP35Q9NRY4 1499 aa29.98■■■□□ 2.39
CLPB-202ENST00000340729 LAMC3Q9Y6N6 1575 aa29.97■■■□□ 2.39
CLPB-202ENST00000340729 SUPT16HQ9Y5B9 1047 aaKnown RBP29.96■■■□□ 2.39
CLPB-202ENST00000340729 MAP3K1Q13233 1512 aa29.96■■■□□ 2.39
CLPB-202ENST00000340729 DNAJC5BQ9UF47 199 aa29.95■■■□□ 2.39
CLPB-202ENST00000340729 DNMBPQ6XZF7 1577 aa29.94■■■□□ 2.38
CLPB-202ENST00000340729 TOPBP1Q92547 1522 aa29.87■■■□□ 2.37
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms