RNA–Protein interactions for RNA: ENST00000301727.8

E4F1-201, Transcript of E4F transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene E4F1, Length 2,573 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
E4F1-201ENST00000301727 NISCHQ9Y2I1 1504 aa37.52■■■■□ 3.6
E4F1-201ENST00000301727 HRCP23327 699 aa33.25■■■□□ 2.91
E4F1-201ENST00000301727 SHROOM4Q9ULL8 1493 aa32.94■■■□□ 2.86
E4F1-201ENST00000301727 SUPT5HO00267 1087 aaKnown RBP32.81■■■□□ 2.84
E4F1-201ENST00000301727 MYO15BQ96JP2 1530 aa32.53■■■□□ 2.8
E4F1-201ENST00000301727 PCGF6Q9BYE7 350 aa32.52■■■□□ 2.8
E4F1-201ENST00000301727 PPARGC1BQ86YN6 1023 aaKnown RBP32.4■■■□□ 2.78
E4F1-201ENST00000301727 CHIC1Q5VXU3 224 aa32.35■■■□□ 2.77
E4F1-201ENST00000301727 PELP1Q8IZL8 1130 aaKnown RBP32.08■■■□□ 2.73
E4F1-201ENST00000301727 DCAF1Q9Y4B6 1507 aa31.98■■■□□ 2.71
E4F1-201ENST00000301727 ZCCHC6Q5VYS8 1495 aaKnown RBP31.94■■■□□ 2.7
E4F1-201ENST00000301727 TRIM26Q12899 539 aaPredicted RBP31.62■■■□□ 2.65
E4F1-201ENST00000301727 CCDC180Q9P1Z9 1646 aa31.6■■■□□ 2.65
E4F1-201ENST00000301727 LOC105371045A0A1W2PR82 267 aa31.5■■■□□ 2.63
E4F1-201ENST00000301727 ZEB1P37275 1124 aaPredicted RBP31.42■■■□□ 2.62
E4F1-201ENST00000301727 SCAF1Q9H7N4 1312 aaKnown RBP31.34■■■□□ 2.61
E4F1-201ENST00000301727 DCAF8L2P0C7V8 631 aa31■■■□□ 2.55
E4F1-201ENST00000301727 MYT1Q01538 1121 aa30.85■■■□□ 2.53
E4F1-201ENST00000301727 ACIN1Q9UKV3 1341 aaKnown RBP30.67■■■□□ 2.5
E4F1-201ENST00000301727 NEUROD1Q13562 356 aa30.52■■■□□ 2.48
E4F1-201ENST00000301727 TRIM41Q8WV44 630 aa30.44■■■□□ 2.46
E4F1-201ENST00000301727 ABCC9O60706 1549 aa30.37■■■□□ 2.45
E4F1-201ENST00000301727 GTF3C3Q9Y5Q9 886 aa30.36■■■□□ 2.45
E4F1-201ENST00000301727 CENPBP07199 599 aaPredicted RBP30.35■■■□□ 2.45
E4F1-201ENST00000301727 FAM9AQ8IZU1 332 aaPredicted RBP30.3■■■□□ 2.44
E4F1-201ENST00000301727 DIEXFQ68CQ4 756 aaKnown RBP30.18■■■□□ 2.42
E4F1-201ENST00000301727 CCER1Q8TC90 406 aaPredicted RBP30.17■■■□□ 2.42
E4F1-201ENST00000301727 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.16■■■□□ 2.42
E4F1-201ENST00000301727 RSF1Q96T23 1441 aaPredicted RBP30.13■■■□□ 2.41
E4F1-201ENST00000301727 EHMT2Q96KQ7 1210 aa30.07■■■□□ 2.4
E4F1-201ENST00000301727 RB1CC1Q8TDY2 1594 aa30.01■■■□□ 2.4
E4F1-201ENST00000301727 SCRIBQ14160 1630 aa29.68■■■□□ 2.34
E4F1-201ENST00000301727 ZNF316A6NFI3 1004 aaPredicted RBP29.65■■■□□ 2.34
E4F1-201ENST00000301727 YTHDC1Q96MU7 727 aaKnown RBP29.58■■■□□ 2.33
E4F1-201ENST00000301727 WRNQ14191 1432 aaPredicted RBP eCLIP29.49■■■□□ 2.31
E4F1-201ENST00000301727 TTBK1Q5TCY1 1321 aaPredicted RBP29.39■■■□□ 2.3
E4F1-201ENST00000301727 MIER1Q8N108 512 aa29.37■■■□□ 2.29
E4F1-201ENST00000301727 CEP162Q5TB80 1403 aa29.26■■■□□ 2.27
E4F1-201ENST00000301727 MROH2BQ7Z745 1585 aa29.26■■■□□ 2.27
E4F1-201ENST00000301727 CECR2Q9BXF3 1484 aa29.25■■■□□ 2.27
E4F1-201ENST00000301727 EIF4G1Q04637 1599 aaKnown RBP29.2■■■□□ 2.26
E4F1-201ENST00000301727 WIZO95785 1651 aa29.19■■■□□ 2.26
E4F1-201ENST00000301727 TNIKQ9UKE5 1360 aa29.11■■■□□ 2.25
E4F1-201ENST00000301727 CLSPNQ9HAW4 1339 aa29.09■■■□□ 2.25
E4F1-201ENST00000301727 BAZ1AQ9NRL2 1556 aaPredicted RBP29.05■■■□□ 2.24
E4F1-201ENST00000301727 CCDC88BA6NC98 1476 aa29■■■□□ 2.23
E4F1-201ENST00000301727 SUPT16HQ9Y5B9 1047 aaKnown RBP28.95■■■□□ 2.23
E4F1-201ENST00000301727 ABCC8Q09428 1581 aa28.95■■■□□ 2.22
E4F1-201ENST00000301727 HNRNPUL2Q1KMD3 747 aaKnown RBP28.89■■■□□ 2.21
E4F1-201ENST00000301727 SOGA1O94964 1423 aa28.88■■■□□ 2.21
E4F1-201ENST00000301727 EEA1Q15075 1411 aa28.87■■■□□ 2.21
E4F1-201ENST00000301727 UBTFP17480 764 aaKnown RBP28.87■■■□□ 2.21
E4F1-201ENST00000301727 ANP32EQ9BTT0 268 aa28.87■■■□□ 2.21
E4F1-201ENST00000301727 CSRNP3Q8WYN3 585 aa28.82■■■□□ 2.2
E4F1-201ENST00000301727 TSHZ2Q9NRE2 1034 aa28.79■■■□□ 2.2
E4F1-201ENST00000301727 GOLGA3Q08378 1498 aa28.76■■■□□ 2.19
E4F1-201ENST00000301727 NACADO15069 1562 aa28.75■■■□□ 2.19
E4F1-201ENST00000301727 RUSC2Q8N2Y8 1516 aa28.68■■■□□ 2.18
E4F1-201ENST00000301727 BCL11AQ9H165 835 aa28.68■■■□□ 2.18
E4F1-201ENST00000301727 TOP2AP11388 1531 aaKnown RBP28.68■■■□□ 2.18
E4F1-201ENST00000301727 SMARCA2P51531 1590 aa28.58■■■□□ 2.16
E4F1-201ENST00000301727 VPS8Q8N3P4 1428 aa28.5■■■□□ 2.15
E4F1-201ENST00000301727 CLIP1P30622 1438 aa28.49■■■□□ 2.15
E4F1-201ENST00000301727 APLP2Q06481 763 aa28.48■■■□□ 2.15
E4F1-201ENST00000301727 CEP164Q9UPV0 1460 aa28.48■■■□□ 2.15
E4F1-201ENST00000301727 KIF21BO75037 1637 aa28.43■■■□□ 2.14
E4F1-201ENST00000301727 DHX57Q6P158 1386 aaKnown RBP28.43■■■□□ 2.14
E4F1-201ENST00000301727 SMARCA4P51532 1647 aa28.36■■■□□ 2.13
E4F1-201ENST00000301727 BAZ1BQ9UIG0 1483 aaKnown RBP28.27■■■□□ 2.12
E4F1-201ENST00000301727 BCANQ96GW7 911 aa28.25■■■□□ 2.11
E4F1-201ENST00000301727 FKBP8Q14318 412 aa28.19■■■□□ 2.1
E4F1-201ENST00000301727 KCNH8Q96L42 1107 aa28.17■■■□□ 2.1
E4F1-201ENST00000301727 RBM19Q9Y4C8 960 aaKnown RBP28.13■■■□□ 2.09
E4F1-201ENST00000301727 RAPGEF2Q9Y4G8 1499 aa28.12■■■□□ 2.09
E4F1-201ENST00000301727 SYNJ1O43426 1573 aa28.11■■■□□ 2.09
E4F1-201ENST00000301727 RANGAP1P46060 587 aaPredicted RBP28.06■■■□□ 2.08
E4F1-201ENST00000301727 NEFLP07196 543 aa28.04■■■□□ 2.08
E4F1-201ENST00000301727 CUX2O14529 1486 aa28■■■□□ 2.07
E4F1-201ENST00000301727 RRBP1Q9P2E9 1410 aaKnown RBP27.98■■■□□ 2.07
E4F1-201ENST00000301727 KANK4Q5T7N3 995 aaPredicted RBP27.92■■■□□ 2.06
E4F1-201ENST00000301727 ARAP1Q96P48 1450 aa27.88■■■□□ 2.05
E4F1-201ENST00000301727 DDX10Q13206 875 aaKnown RBP27.85■■■□□ 2.05
E4F1-201ENST00000301727 ITGAEP38570 1179 aa27.84■■■□□ 2.05
E4F1-201ENST00000301727 MSH5O43196 834 aa27.83■■■□□ 2.05
E4F1-201ENST00000301727 CCNB3Q8WWL7 1395 aa27.82■■■□□ 2.04
E4F1-201ENST00000301727 MAPKBP1O60336 1514 aa27.79■■■□□ 2.04
E4F1-201ENST00000301727 ERICH3Q5RHP9 1530 aa27.77■■■□□ 2.04
E4F1-201ENST00000301727 CCER2I3L3R5 266 aa27.75■■■□□ 2.03
E4F1-201ENST00000301727 TRIM52Q96A61 297 aa27.74■■■□□ 2.03
E4F1-201ENST00000301727 RAB3GAP2Q9H2M9 1393 aa27.74■■■□□ 2.03
E4F1-201ENST00000301727 FANCIQ9NVI1 1328 aa27.73■■■□□ 2.03
E4F1-201ENST00000301727 PPP1R15AO75807 674 aaPredicted RBP27.73■■■□□ 2.03
E4F1-201ENST00000301727 UNC13AQ9UPW8 1703 aa27.73■■■□□ 2.03
E4F1-201ENST00000301727 WDR97A6NE52 1622 aa27.71■■■□□ 2.03
E4F1-201ENST00000301727 PEG3Q9GZU2 1588 aa27.7■■■□□ 2.02
E4F1-201ENST00000301727 ERICH6Q7L0X2 663 aa27.68■■■□□ 2.02
E4F1-201ENST00000301727 PRXQ9BXM0 1461 aa27.67■■■□□ 2.02
E4F1-201ENST00000301727 ANP32CO43423 234 aa27.66■■■□□ 2.02
E4F1-201ENST00000301727 TOP2BQ02880 1626 aa27.65■■■□□ 2.02
E4F1-201ENST00000301727 CDK11AQ9UQ88 783 aaPredicted RBP27.59■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms