Protein–RNA interactions for Protein: Q8N535

LINC00471, Putative uncharacterized protein encoded by LINC00471, humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00471Q8N535 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC21.92■■□□□ 1.1
LINC00471Q8N535 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
LINC00471Q8N535 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
LINC00471Q8N535 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
LINC00471Q8N535 EED-207ENST00000528180 1745 ntTSL 5 BASIC21.92■■□□□ 1.1
LINC00471Q8N535 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC21.92■■□□□ 1.1
LINC00471Q8N535 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
LINC00471Q8N535 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC21.91■■□□□ 1.1
LINC00471Q8N535 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC21.91■■□□□ 1.1
LINC00471Q8N535 RARA-203ENST00000394086 2008 ntTSL 2 BASIC21.91■■□□□ 1.1
LINC00471Q8N535 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC21.91■■□□□ 1.1
LINC00471Q8N535 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC21.91■■□□□ 1.1
LINC00471Q8N535 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
LINC00471Q8N535 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
LINC00471Q8N535 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
LINC00471Q8N535 AC097639.1-201ENST00000565519 1891 ntBASIC21.9■■□□□ 1.1
LINC00471Q8N535 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC21.9■■□□□ 1.1
LINC00471Q8N535 HLA-V-202ENST00000446817 847 ntBASIC21.9■■□□□ 1.1
LINC00471Q8N535 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
LINC00471Q8N535 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
LINC00471Q8N535 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
LINC00471Q8N535 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
LINC00471Q8N535 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
LINC00471Q8N535 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC21.89■■□□□ 1.1
LINC00471Q8N535 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC21.89■■□□□ 1.1
LINC00471Q8N535 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
LINC00471Q8N535 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
LINC00471Q8N535 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
LINC00471Q8N535 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC21.89■■□□□ 1.09
LINC00471Q8N535 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
LINC00471Q8N535 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
LINC00471Q8N535 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
LINC00471Q8N535 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
LINC00471Q8N535 AGPS-202ENST00000409888 815 ntTSL 4 BASIC21.88■■□□□ 1.09
LINC00471Q8N535 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC21.88■■□□□ 1.09
LINC00471Q8N535 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC21.88■■□□□ 1.09
LINC00471Q8N535 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
LINC00471Q8N535 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
LINC00471Q8N535 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
LINC00471Q8N535 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
LINC00471Q8N535 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
LINC00471Q8N535 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
LINC00471Q8N535 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC21.87■■□□□ 1.09
LINC00471Q8N535 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
LINC00471Q8N535 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
LINC00471Q8N535 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
LINC00471Q8N535 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
LINC00471Q8N535 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
LINC00471Q8N535 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC21.86■■□□□ 1.09
LINC00471Q8N535 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
LINC00471Q8N535 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
LINC00471Q8N535 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
LINC00471Q8N535 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC21.86■■□□□ 1.09
LINC00471Q8N535 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
LINC00471Q8N535 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
LINC00471Q8N535 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
LINC00471Q8N535 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
LINC00471Q8N535 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
LINC00471Q8N535 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
LINC00471Q8N535 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC21.84■■□□□ 1.09
LINC00471Q8N535 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
LINC00471Q8N535 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC21.84■■□□□ 1.09
LINC00471Q8N535 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
LINC00471Q8N535 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC21.84■■□□□ 1.09
LINC00471Q8N535 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
LINC00471Q8N535 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC21.83■■□□□ 1.09
LINC00471Q8N535 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
LINC00471Q8N535 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
LINC00471Q8N535 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.09
LINC00471Q8N535 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
LINC00471Q8N535 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.09
LINC00471Q8N535 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
LINC00471Q8N535 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.08
LINC00471Q8N535 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
LINC00471Q8N535 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
LINC00471Q8N535 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC21.82■■□□□ 1.08
LINC00471Q8N535 MLEC-202ENST00000412616 841 ntTSL 3 BASIC21.82■■□□□ 1.08
LINC00471Q8N535 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC21.82■■□□□ 1.08
LINC00471Q8N535 MED25-210ENST00000612854 801 ntTSL 5 BASIC21.82■■□□□ 1.08
LINC00471Q8N535 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
LINC00471Q8N535 MED25-214ENST00000622402 642 ntTSL 5 BASIC21.82■■□□□ 1.08
LINC00471Q8N535 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
LINC00471Q8N535 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
LINC00471Q8N535 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
LINC00471Q8N535 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
LINC00471Q8N535 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC21.81■■□□□ 1.08
LINC00471Q8N535 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
LINC00471Q8N535 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
LINC00471Q8N535 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
LINC00471Q8N535 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
LINC00471Q8N535 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
LINC00471Q8N535 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
LINC00471Q8N535 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC21.8■■□□□ 1.08
LINC00471Q8N535 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
LINC00471Q8N535 RPS2P35-201ENST00000443417 897 ntBASIC21.8■■□□□ 1.08
LINC00471Q8N535 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
LINC00471Q8N535 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
LINC00471Q8N535 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
LINC00471Q8N535 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
LINC00471Q8N535 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms