Protein–RNA interactions for Protein: Q53RY4

KRTCAP3, Keratinocyte-associated protein 3, humanhuman

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTCAP3Q53RY4 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC21.7■■□□□ 1.06
KRTCAP3Q53RY4 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC21.69■■□□□ 1.06
KRTCAP3Q53RY4 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
KRTCAP3Q53RY4 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
KRTCAP3Q53RY4 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
KRTCAP3Q53RY4 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC21.69■■□□□ 1.06
KRTCAP3Q53RY4 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
KRTCAP3Q53RY4 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
KRTCAP3Q53RY4 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
KRTCAP3Q53RY4 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC21.68■■□□□ 1.06
KRTCAP3Q53RY4 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
KRTCAP3Q53RY4 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
KRTCAP3Q53RY4 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
KRTCAP3Q53RY4 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
KRTCAP3Q53RY4 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC21.68■■□□□ 1.06
KRTCAP3Q53RY4 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
KRTCAP3Q53RY4 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
KRTCAP3Q53RY4 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
KRTCAP3Q53RY4 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
KRTCAP3Q53RY4 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC21.67■■□□□ 1.06
KRTCAP3Q53RY4 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
KRTCAP3Q53RY4 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
KRTCAP3Q53RY4 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
KRTCAP3Q53RY4 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
KRTCAP3Q53RY4 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
KRTCAP3Q53RY4 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC21.66■■□□□ 1.06
KRTCAP3Q53RY4 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
KRTCAP3Q53RY4 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC21.66■■□□□ 1.06
KRTCAP3Q53RY4 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
KRTCAP3Q53RY4 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
KRTCAP3Q53RY4 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
KRTCAP3Q53RY4 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
KRTCAP3Q53RY4 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC21.65■■□□□ 1.06
KRTCAP3Q53RY4 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
KRTCAP3Q53RY4 AC139426.1-201ENST00000568218 2529 ntBASIC21.64■■□□□ 1.06
KRTCAP3Q53RY4 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
KRTCAP3Q53RY4 MIR4787-201ENST00000607364 84 ntBASIC21.64■■□□□ 1.05
KRTCAP3Q53RY4 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC21.64■■□□□ 1.05
KRTCAP3Q53RY4 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC21.64■■□□□ 1.05
KRTCAP3Q53RY4 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
KRTCAP3Q53RY4 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
KRTCAP3Q53RY4 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
KRTCAP3Q53RY4 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
KRTCAP3Q53RY4 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
KRTCAP3Q53RY4 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC21.63■■□□□ 1.05
KRTCAP3Q53RY4 CREM-229ENST00000474362 1030 ntTSL 2 BASIC21.63■■□□□ 1.05
KRTCAP3Q53RY4 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC21.63■■□□□ 1.05
KRTCAP3Q53RY4 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC21.63■■□□□ 1.05
KRTCAP3Q53RY4 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
KRTCAP3Q53RY4 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC21.62■■□□□ 1.05
KRTCAP3Q53RY4 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
KRTCAP3Q53RY4 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
KRTCAP3Q53RY4 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
KRTCAP3Q53RY4 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
KRTCAP3Q53RY4 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
KRTCAP3Q53RY4 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
KRTCAP3Q53RY4 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
KRTCAP3Q53RY4 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC21.6■■□□□ 1.05
KRTCAP3Q53RY4 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
KRTCAP3Q53RY4 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
KRTCAP3Q53RY4 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
KRTCAP3Q53RY4 MTURN-203ENST00000409688 843 ntTSL 2 BASIC21.6■■□□□ 1.05
KRTCAP3Q53RY4 AC137630.3-201ENST00000607245 391 ntBASIC21.6■■□□□ 1.05
KRTCAP3Q53RY4 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
KRTCAP3Q53RY4 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
KRTCAP3Q53RY4 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
KRTCAP3Q53RY4 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
KRTCAP3Q53RY4 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC21.59■■□□□ 1.05
KRTCAP3Q53RY4 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC21.59■■□□□ 1.05
KRTCAP3Q53RY4 GRAMD4P7-201ENST00000578182 1232 ntBASIC21.59■■□□□ 1.05
KRTCAP3Q53RY4 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC21.59■■□□□ 1.05
KRTCAP3Q53RY4 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
KRTCAP3Q53RY4 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
KRTCAP3Q53RY4 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC21.59■■□□□ 1.05
KRTCAP3Q53RY4 AP004609.3-201ENST00000610705 1884 ntBASIC21.58■■□□□ 1.05
KRTCAP3Q53RY4 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
KRTCAP3Q53RY4 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC21.58■■□□□ 1.05
KRTCAP3Q53RY4 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC21.58■■□□□ 1.05
KRTCAP3Q53RY4 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
KRTCAP3Q53RY4 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.04
KRTCAP3Q53RY4 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
KRTCAP3Q53RY4 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
KRTCAP3Q53RY4 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC21.57■■□□□ 1.04
KRTCAP3Q53RY4 AC120024.1-201ENST00000562672 995 ntBASIC21.57■■□□□ 1.04
KRTCAP3Q53RY4 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
KRTCAP3Q53RY4 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
KRTCAP3Q53RY4 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC21.57■■□□□ 1.04
KRTCAP3Q53RY4 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
KRTCAP3Q53RY4 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
KRTCAP3Q53RY4 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
KRTCAP3Q53RY4 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
KRTCAP3Q53RY4 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
KRTCAP3Q53RY4 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
KRTCAP3Q53RY4 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC21.56■■□□□ 1.04
KRTCAP3Q53RY4 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC21.56■■□□□ 1.04
KRTCAP3Q53RY4 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
KRTCAP3Q53RY4 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
KRTCAP3Q53RY4 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC21.56■■□□□ 1.04
KRTCAP3Q53RY4 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC21.55■■□□□ 1.04
KRTCAP3Q53RY4 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC21.55■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 11.8 ms