Protein–RNA interactions for Protein: O75437

ZNF254, Zinc finger protein 254, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF254O75437 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC21.18■□□□□ 0.98
ZNF254O75437 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ZNF254O75437 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ZNF254O75437 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ZNF254O75437 ABHD17AP4-201ENST00000411545 909 ntBASIC21.17■□□□□ 0.98
ZNF254O75437 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
ZNF254O75437 MACF1-219ENST00000484793 834 ntTSL 2 BASIC21.17■□□□□ 0.98
ZNF254O75437 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
ZNF254O75437 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC21.17■□□□□ 0.98
ZNF254O75437 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ZNF254O75437 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ZNF254O75437 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ZNF254O75437 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
ZNF254O75437 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
ZNF254O75437 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
ZNF254O75437 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
ZNF254O75437 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC21.15■□□□□ 0.98
ZNF254O75437 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
ZNF254O75437 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
ZNF254O75437 AC022211.4-201ENST00000625094 2161 ntBASIC21.15■□□□□ 0.98
ZNF254O75437 MIR3648-2-201ENST00000581792 180 ntBASIC21.15■□□□□ 0.98
ZNF254O75437 MIR3648-1-201ENST00000615959 180 ntBASIC21.15■□□□□ 0.98
ZNF254O75437 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
ZNF254O75437 GDI1-215ENST00000630693 786 ntTSL 4 BASIC21.15■□□□□ 0.98
ZNF254O75437 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ZNF254O75437 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC21.15■□□□□ 0.98
ZNF254O75437 LTK-203ENST00000453182 2412 ntTSL 2 BASIC21.15■□□□□ 0.98
ZNF254O75437 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
ZNF254O75437 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
ZNF254O75437 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC21.15■□□□□ 0.98
ZNF254O75437 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
ZNF254O75437 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC21.14■□□□□ 0.98
ZNF254O75437 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
ZNF254O75437 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
ZNF254O75437 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
ZNF254O75437 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
ZNF254O75437 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
ZNF254O75437 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC21.14■□□□□ 0.97
ZNF254O75437 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ZNF254O75437 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
ZNF254O75437 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
ZNF254O75437 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
ZNF254O75437 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC21.12■□□□□ 0.97
ZNF254O75437 AC138932.3-201ENST00000567634 1902 ntBASIC21.12■□□□□ 0.97
ZNF254O75437 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ZNF254O75437 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
ZNF254O75437 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC21.11■□□□□ 0.97
ZNF254O75437 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
ZNF254O75437 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ZNF254O75437 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
ZNF254O75437 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ZNF254O75437 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ZNF254O75437 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ZNF254O75437 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
ZNF254O75437 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC21.09■□□□□ 0.97
ZNF254O75437 AL139125.2-201ENST00000623134 1869 ntBASIC21.09■□□□□ 0.97
ZNF254O75437 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
ZNF254O75437 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC21.09■□□□□ 0.97
ZNF254O75437 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ZNF254O75437 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ZNF254O75437 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
ZNF254O75437 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC21.08■□□□□ 0.97
ZNF254O75437 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
ZNF254O75437 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
ZNF254O75437 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
ZNF254O75437 PREB-202ENST00000406567 1910 ntTSL 5 BASIC21.08■□□□□ 0.96
ZNF254O75437 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC21.08■□□□□ 0.96
ZNF254O75437 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC21.07■□□□□ 0.96
ZNF254O75437 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
ZNF254O75437 THRA-202ENST00000394121 2260 ntTSL 2 BASIC21.07■□□□□ 0.96
ZNF254O75437 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC21.07■□□□□ 0.96
ZNF254O75437 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
ZNF254O75437 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
ZNF254O75437 METRNL-202ENST00000570778 967 ntTSL 5 BASIC21.07■□□□□ 0.96
ZNF254O75437 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
ZNF254O75437 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC21.07■□□□□ 0.96
ZNF254O75437 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
ZNF254O75437 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
ZNF254O75437 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC21.06■□□□□ 0.96
ZNF254O75437 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
ZNF254O75437 AC016575.1-201ENST00000607026 382 ntBASIC21.06■□□□□ 0.96
ZNF254O75437 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC21.06■□□□□ 0.96
ZNF254O75437 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
ZNF254O75437 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
ZNF254O75437 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC21.05■□□□□ 0.96
ZNF254O75437 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC21.05■□□□□ 0.96
ZNF254O75437 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ZNF254O75437 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ZNF254O75437 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC21.05■□□□□ 0.96
ZNF254O75437 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
ZNF254O75437 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
ZNF254O75437 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
ZNF254O75437 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
ZNF254O75437 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
ZNF254O75437 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
ZNF254O75437 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
ZNF254O75437 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
ZNF254O75437 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC21.04■□□□□ 0.96
ZNF254O75437 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
ZNF254O75437 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms