Protein–RNA interactions for Protein: A0A0B4J1U6

TRBV9, T-cell receptor beta variable 9 (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV9A0A0B4J1U6 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TRBV9A0A0B4J1U6 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
TRBV9A0A0B4J1U6 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRBV9A0A0B4J1U6 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRBV9A0A0B4J1U6 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRBV9A0A0B4J1U6 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRBV9A0A0B4J1U6 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRBV9A0A0B4J1U6 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRBV9A0A0B4J1U6 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC19.04■□□□□ 0.64
TRBV9A0A0B4J1U6 GPX1-201ENST00000419349 1106 ntBASIC19.04■□□□□ 0.64
TRBV9A0A0B4J1U6 HES4-202ENST00000428771 1040 ntTSL 2 BASIC19.04■□□□□ 0.64
TRBV9A0A0B4J1U6 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC19.04■□□□□ 0.64
TRBV9A0A0B4J1U6 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
TRBV9A0A0B4J1U6 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRBV9A0A0B4J1U6 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRBV9A0A0B4J1U6 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC19.03■□□□□ 0.64
TRBV9A0A0B4J1U6 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
TRBV9A0A0B4J1U6 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRBV9A0A0B4J1U6 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRBV9A0A0B4J1U6 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TRBV9A0A0B4J1U6 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRBV9A0A0B4J1U6 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC19.03■□□□□ 0.64
TRBV9A0A0B4J1U6 PFN2-211ENST00000489155 636 ntTSL 4 BASIC19.03■□□□□ 0.64
TRBV9A0A0B4J1U6 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRBV9A0A0B4J1U6 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TRBV9A0A0B4J1U6 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TRBV9A0A0B4J1U6 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC19.03■□□□□ 0.64
TRBV9A0A0B4J1U6 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TRBV9A0A0B4J1U6 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TRBV9A0A0B4J1U6 SMPD5-203ENST00000639008 1464 ntBASIC19.03■□□□□ 0.64
TRBV9A0A0B4J1U6 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC19.02■□□□□ 0.64
TRBV9A0A0B4J1U6 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
TRBV9A0A0B4J1U6 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
TRBV9A0A0B4J1U6 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC19.02■□□□□ 0.64
TRBV9A0A0B4J1U6 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC19.02■□□□□ 0.64
TRBV9A0A0B4J1U6 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
TRBV9A0A0B4J1U6 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC19.02■□□□□ 0.63
TRBV9A0A0B4J1U6 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC19.01■□□□□ 0.63
TRBV9A0A0B4J1U6 AC092803.2-201ENST00000564287 1899 ntBASIC19.01■□□□□ 0.63
TRBV9A0A0B4J1U6 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRBV9A0A0B4J1U6 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TRBV9A0A0B4J1U6 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC19.01■□□□□ 0.63
TRBV9A0A0B4J1U6 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRBV9A0A0B4J1U6 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRBV9A0A0B4J1U6 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC19.01■□□□□ 0.63
TRBV9A0A0B4J1U6 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC19.01■□□□□ 0.63
TRBV9A0A0B4J1U6 REST-210ENST00000638187 1334 ntTSL 5 BASIC19■□□□□ 0.63
TRBV9A0A0B4J1U6 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC19■□□□□ 0.63
TRBV9A0A0B4J1U6 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC19■□□□□ 0.63
TRBV9A0A0B4J1U6 ABHD17AP3-201ENST00000503096 1137 ntBASIC19■□□□□ 0.63
TRBV9A0A0B4J1U6 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
TRBV9A0A0B4J1U6 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
TRBV9A0A0B4J1U6 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TRBV9A0A0B4J1U6 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TRBV9A0A0B4J1U6 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC19■□□□□ 0.63
TRBV9A0A0B4J1U6 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC19■□□□□ 0.63
TRBV9A0A0B4J1U6 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRBV9A0A0B4J1U6 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC18.99■□□□□ 0.63
TRBV9A0A0B4J1U6 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC18.99■□□□□ 0.63
TRBV9A0A0B4J1U6 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC18.99■□□□□ 0.63
TRBV9A0A0B4J1U6 MIR3960-201ENST00000583311 91 ntBASIC18.99■□□□□ 0.63
TRBV9A0A0B4J1U6 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRBV9A0A0B4J1U6 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRBV9A0A0B4J1U6 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRBV9A0A0B4J1U6 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC18.98■□□□□ 0.63
TRBV9A0A0B4J1U6 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC18.98■□□□□ 0.63
TRBV9A0A0B4J1U6 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
TRBV9A0A0B4J1U6 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRBV9A0A0B4J1U6 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TRBV9A0A0B4J1U6 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
TRBV9A0A0B4J1U6 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
TRBV9A0A0B4J1U6 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
TRBV9A0A0B4J1U6 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRBV9A0A0B4J1U6 DUSP8P4-201ENST00000399538 1761 ntBASIC18.96■□□□□ 0.63
TRBV9A0A0B4J1U6 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRBV9A0A0B4J1U6 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRBV9A0A0B4J1U6 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC18.96■□□□□ 0.63
TRBV9A0A0B4J1U6 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TRBV9A0A0B4J1U6 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
TRBV9A0A0B4J1U6 THRA-202ENST00000394121 2260 ntTSL 2 BASIC18.95■□□□□ 0.62
TRBV9A0A0B4J1U6 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRBV9A0A0B4J1U6 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRBV9A0A0B4J1U6 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC18.95■□□□□ 0.62
TRBV9A0A0B4J1U6 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC18.95■□□□□ 0.62
TRBV9A0A0B4J1U6 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRBV9A0A0B4J1U6 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TRBV9A0A0B4J1U6 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
TRBV9A0A0B4J1U6 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TRBV9A0A0B4J1U6 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC18.95■□□□□ 0.62
TRBV9A0A0B4J1U6 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRBV9A0A0B4J1U6 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC18.94■□□□□ 0.62
TRBV9A0A0B4J1U6 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRBV9A0A0B4J1U6 RNF126P1-201ENST00000567452 1320 ntBASIC18.94■□□□□ 0.62
TRBV9A0A0B4J1U6 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TRBV9A0A0B4J1U6 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRBV9A0A0B4J1U6 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRBV9A0A0B4J1U6 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRBV9A0A0B4J1U6 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC18.93■□□□□ 0.62
TRBV9A0A0B4J1U6 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC18.93■□□□□ 0.62
TRBV9A0A0B4J1U6 AC007029.1-201ENST00000604183 313 ntBASIC18.93■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 82.4 ms