Protein–RNA interactions for Protein: Q71RC2

LARP4, La-related protein 4, humanhuman

Known RBP eCLIP

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LARP4Q71RC2 CLN3-258ENST00000637184 1753 ntTSL 518.35■□□□□ 0.531e-6■□□□□ 8.2
LARP4Q71RC2 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC18.12■□□□□ 0.491e-6■□□□□ 8.2
LARP4Q71RC2 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC18■□□□□ 0.471e-6■□□□□ 8.2
LARP4Q71RC2 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.421e-6■□□□□ 8.2
LARP4Q71RC2 CLN3-260ENST00000637578 1577 ntTSL 217.58■□□□□ 0.411e-6■□□□□ 8.2
LARP4Q71RC2 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC17.41■□□□□ 0.381e-6■□□□□ 8.2
LARP4Q71RC2 AC138894.1-211ENST00000636766 2061 ntTSL 517.4■□□□□ 0.381e-6■□□□□ 8.2
LARP4Q71RC2 AC138894.1-208ENST00000636017 2223 ntTSL 517.13■□□□□ 0.331e-6■□□□□ 8.2
LARP4Q71RC2 SORBS3-206ENST00000519127 209 ntTSL 217.11■□□□□ 0.331e-6■□□□□ 8.2
LARP4Q71RC2 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC17.05■□□□□ 0.321e-6■□□□□ 8.2
LARP4Q71RC2 CLN3-256ENST00000637107 1946 ntTSL 516.94■□□□□ 0.31e-6■□□□□ 8.2
LARP4Q71RC2 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.291e-6■□□□□ 8.2
LARP4Q71RC2 AC138894.1-209ENST00000637299 1954 ntTSL 516.88■□□□□ 0.291e-6■□□□□ 8.2
LARP4Q71RC2 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC16.82■□□□□ 0.281e-6■□□□□ 8.2
LARP4Q71RC2 AC138894.1-207ENST00000636866 2452 ntTSL 516.68■□□□□ 0.261e-6■□□□□ 8.2
LARP4Q71RC2 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC16.67■□□□□ 0.266e-11■□□□□ 8.2
LARP4Q71RC2 AC138894.1-202ENST00000637376 2512 ntTSL 516.54■□□□□ 0.241e-6■□□□□ 8.2
LARP4Q71RC2 CLN3-247ENST00000636351 1292 ntTSL 516.48■□□□□ 0.231e-6■□□□□ 8.2
LARP4Q71RC2 CLN3-252ENST00000636907 1679 ntTSL 216.45■□□□□ 0.221e-6■□□□□ 8.2
LARP4Q71RC2 AC138894.1-203ENST00000636078 2382 ntTSL 516.18■□□□□ 0.181e-6■□□□□ 8.2
LARP4Q71RC2 DOLPP1-204ENST00000412363 911 ntTSL 516.05■□□□□ 0.161e-6■□□□□ 8.2
LARP4Q71RC2 CLN3-217ENST00000565354 759 ntTSL 515.99■□□□□ 0.151e-6■□□□□ 8.2
LARP4Q71RC2 AC138894.1-204ENST00000636503 2521 ntTSL 515.73■□□□□ 0.111e-6■□□□□ 8.2
LARP4Q71RC2 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.111e-6■□□□□ 8.2
LARP4Q71RC2 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC15.62■□□□□ 0.091e-6■□□□□ 8.2
LARP4Q71RC2 NPTN-208ENST00000565282 1247 ntTSL 1 (best)15.56■□□□□ 0.081e-6■□□□□ 8.2
LARP4Q71RC2 CLN3-211ENST00000564091 790 ntTSL 515.27■□□□□ 0.041e-6■□□□□ 8.2
LARP4Q71RC2 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC15.21■□□□□ 0.031e-6■□□□□ 8.2
LARP4Q71RC2 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC15.16■□□□□ 0.021e-6■□□□□ 8.2
LARP4Q71RC2 CLN3-253ENST00000636977 2969 ntTSL 514.91□□□□□ -0.021e-6■□□□□ 8.2
LARP4Q71RC2 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC14.81□□□□□ -0.041e-6■□□□□ 8.2
LARP4Q71RC2 MYD88-202ENST00000416282 2730 ntTSL 1 (best)14.73□□□□□ -0.051e-6■□□□□ 8.2
LARP4Q71RC2 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC14.65□□□□□ -0.067e-16■□□□□ 8.2
LARP4Q71RC2 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC14.48□□□□□ -0.091e-6■□□□□ 8.2
LARP4Q71RC2 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.091e-6■□□□□ 8.2
LARP4Q71RC2 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.121e-6■□□□□ 8.2
LARP4Q71RC2 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.121e-6■□□□□ 8.2
LARP4Q71RC2 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC14.03□□□□□ -0.161e-6■□□□□ 8.2
LARP4Q71RC2 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC13.92□□□□□ -0.181e-6■□□□□ 8.2
LARP4Q71RC2 NPTN-206ENST00000563753 599 ntTSL 213.76□□□□□ -0.211e-6■□□□□ 8.2
LARP4Q71RC2 NPTN-201ENST00000345330 2444 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.221e-6■□□□□ 8.2
LARP4Q71RC2 YWHAE-201ENST00000264335 2211 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.227e-16■□□□□ 8.2
LARP4Q71RC2 CLN3-242ENST00000635958 1837 ntTSL 513.57□□□□□ -0.241e-6■□□□□ 8.2
LARP4Q71RC2 MYD88-204ENST00000421516 2687 ntAPPRIS ALT2 TSL 1 (best)13.26□□□□□ -0.291e-6■□□□□ 8.2
LARP4Q71RC2 CLN3-210ENST00000563874 3081 ntTSL 213.25□□□□□ -0.291e-6■□□□□ 8.2
LARP4Q71RC2 NPTN-207ENST00000564551 586 ntTSL 313.03□□□□□ -0.321e-6■□□□□ 8.2
LARP4Q71RC2 AC138894.1-212ENST00000637745 879 ntTSL 513.02□□□□□ -0.331e-6■□□□□ 8.2
LARP4Q71RC2 NPTN-209ENST00000565325 858 ntTSL 212.66□□□□□ -0.381e-6■□□□□ 8.2
LARP4Q71RC2 NPTN-204ENST00000562924 1094 ntTSL 1 (best) BASIC12.33□□□□□ -0.441e-6■□□□□ 8.2
LARP4Q71RC2 NPTN-210ENST00000567198 571 ntTSL 411.99□□□□□ -0.491e-6■□□□□ 8.2
LARP4Q71RC2 CHTF8-201ENST00000306585 2561 ntBASIC11.75□□□□□ -0.531e-6■□□□□ 8.2
LARP4Q71RC2 FKBP1A-209ENST00000612074 409 ntTSL 211.45□□□□□ -0.581e-6■□□□□ 8.2
LARP4Q71RC2 NPTN-205ENST00000563691 1214 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.61e-6■□□□□ 8.2
LARP4Q71RC2 CES2-202ENST00000417689 3868 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.66e-11■□□□□ 8.2
LARP4Q71RC2 CLN3-238ENST00000569430 3867 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.611e-6■□□□□ 8.2
LARP4Q71RC2 CLN3-244ENST00000636147 3832 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.661e-6■□□□□ 8.2
LARP4Q71RC2 AFMID-202ENST00000409257 1730 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.71e-6■□□□□ 8.2
LARP4Q71RC2 CES2-201ENST00000317091 3927 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.726e-11■□□□□ 8.2
LARP4Q71RC2 AFMID-206ENST00000587750 541 ntTSL 310.49□□□□□ -0.731e-6■□□□□ 8.2
LARP4Q71RC2 AFMID-207ENST00000588199 778 ntTSL 510.49□□□□□ -0.731e-6■□□□□ 8.2
LARP4Q71RC2 MYD88-209ENST00000481122 712 ntTSL 510.21□□□□□ -0.771e-6■□□□□ 8.2
LARP4Q71RC2 AC138894.1-210ENST00000638036 1154 ntTSL 510.1□□□□□ -0.791e-6■□□□□ 8.2
LARP4Q71RC2 AFMID-208ENST00000588800 647 ntTSL 2 BASIC10.06□□□□□ -0.81e-6■□□□□ 8.2
LARP4Q71RC2 YWHAE-210ENST00000573026 780 ntTSL 3 BASIC9.95□□□□□ -0.827e-16■□□□□ 8.2
LARP4Q71RC2 AFMID-211ENST00000589664 754 ntTSL 59.93□□□□□ -0.821e-6■□□□□ 8.2
LARP4Q71RC2 ALDH2-201ENST00000261733 9569 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.846e-11■□□□□ 8.2
LARP4Q71RC2 THOC5-206ENST00000418021 738 ntTSL 39.51□□□□□ -0.891e-6■□□□□ 8.2
LARP4Q71RC2 YWHAE-202ENST00000466227 1377 ntTSL 59.5□□□□□ -0.897e-16■□□□□ 8.2
LARP4Q71RC2 AFMID-214ENST00000591952 582 ntTSL 2 BASIC9.16□□□□□ -0.941e-6■□□□□ 8.2
LARP4Q71RC2 AFMID-203ENST00000585419 493 ntTSL 38.84□□□□□ -0.991e-6■□□□□ 8.2
LARP4Q71RC2 MYD88-210ENST00000484513 3314 ntTSL 28.77□□□□□ -11e-6■□□□□ 8.2
LARP4Q71RC2 AC138894.1-205ENST00000637378 1112 ntAPPRIS P1 TSL 58.36□□□□□ -1.071e-6■□□□□ 8.2
LARP4Q71RC2 CRLS1-205ENST00000478846 687 ntTSL 26.99□□□□□ -1.291e-6■□□□□ 8.2
LARP4Q71RC2 RAB7A-208ENST00000493186 329 ntTSL 5 BASIC6.13□□□□□ -1.431e-6■□□□□ 8.2
LARP4Q71RC2 RAB7A-205ENST00000485280 507 ntTSL 3 BASIC6.1□□□□□ -1.431e-6■□□□□ 8.2
LARP4Q71RC2 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC5.05□□□□□ -1.61e-6■□□□□ 8.2
LARP4Q71RC2 SLC22A31-204ENST00000568161 651 ntTSL 313.59□□□□□ -0.234e-12■□□□□ 8.2
LARP4Q71RC2 C14orf2-208ENST00000554713 1058 ntTSL 1 (best) BASIC10.84□□□□□ -0.672e-8■□□□□ 8.2
LARP4Q71RC2 C14orf2-212ENST00000557260 856 ntTSL 1 (best)9.31□□□□□ -0.922e-8■□□□□ 8.2
LARP4Q71RC2 C14orf2-205ENST00000554089 932 ntTSL 1 (best)6.81□□□□□ -1.322e-8■□□□□ 8.2
LARP4Q71RC2 SET-205ENST00000409104 962 ntTSL 5 BASIC8.65□□□□□ -1.023e-18■□□□□ 8.2
LARP4Q71RC2 SET-203ENST00000372688 801 ntTSL 2 BASIC3.9□□□□□ -1.793e-18■□□□□ 8.2
LARP4Q71RC2 APOE-205ENST00000485628 771 ntTSL 1 (best)15.08■□□□□ 04e-53■□□□□ 8.2
LARP4Q71RC2 RPS8-207ENST00000485390 1115 ntTSL 1 (best)18.91■□□□□ 0.623e-54■□□□□ 8.2
LARP4Q71RC2 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.974e-7■□□□□ 8.1
LARP4Q71RC2 VTI1B-201ENST00000216456 1103 ntTSL 1 (best)20.11■□□□□ 0.814e-7■□□□□ 8.1
LARP4Q71RC2 GMDS-201ENST00000380805 1743 ntTSL 219.06■□□□□ 0.644e-7■□□□□ 8.1
LARP4Q71RC2 WDR18-210ENST00000591997 577 ntTSL 318.34■□□□□ 0.534e-7■□□□□ 8.1
LARP4Q71RC2 WDR18-209ENST00000591985 1498 ntTSL 517.73■□□□□ 0.434e-7■□□□□ 8.1
LARP4Q71RC2 GMDS-203ENST00000467288 900 ntTSL 517.72■□□□□ 0.434e-7■□□□□ 8.1
LARP4Q71RC2 GMDS-204ENST00000476972 591 ntTSL 217.39■□□□□ 0.374e-7■□□□□ 8.1
LARP4Q71RC2 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.374e-7■□□□□ 8.1
LARP4Q71RC2 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.334e-7■□□□□ 8.1
LARP4Q71RC2 GMDS-205ENST00000486793 567 ntTSL 316.97■□□□□ 0.314e-7■□□□□ 8.1
LARP4Q71RC2 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC16.25■□□□□ 0.194e-7■□□□□ 8.1
LARP4Q71RC2 WDR18-211ENST00000607440 1397 ntTSL 515.52■□□□□ 0.084e-7■□□□□ 8.1
LARP4Q71RC2 WDR18-201ENST00000251289 1501 ntTSL 514.56□□□□□ -0.084e-7■□□□□ 8.1
LARP4Q71RC2 WDR18-205ENST00000590354 678 ntTSL 214.03□□□□□ -0.164e-7■□□□□ 8.1
LARP4Q71RC2 WDR18-207ENST00000591155 417 ntTSL 213.51□□□□□ -0.254e-7■□□□□ 8.1
LARP4Q71RC2 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.284e-7■□□□□ 8.1
Retrieved 100 of 15,922 protein–RNA pairs in 780.9 ms